bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000717
HIT000319413 (
NM_198549
)
(Protein FAM73A;)
genome : 78,245,309 - 78,345,225 (99,917)
query : 1 - 6,407 (6,407/6,424)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000724662 (
NM_001270384
)
(Protein FAM73A;)
genome : 78,245,309 - 78,345,225 (99,917)
query : 1 - 6,410 (6,410/6,427)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000054577
(
BX537792
)
Representative transcript
(Protein FAM73A;)
genome : 78,245,309 - 78,344,080 (98,772)
query : 1 - 5,262 (5,262/5,293)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR019392 : Protein of unknown function DUF2217
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171983
Rattus
sp. (Rat) : BC079359
Danio
sp. (Zebrafish) : BC083228
Mus
sp. (Mouse) : BC098205
Bos
sp. (Cow) : BC126799
Gallus
sp. (Chicken) : ENSGALT00000014556
Oryzias
sp. (Medaka) : ENSORLT00000004319
Pongo
sp. (Orangutan) : ENSPPYT00000001462
Tetraodon
sp. (Tetraodon) : GSTENT00014390001
Takifugu
sp. (Fugu) : SINFRUT00000158550
Monodelphis
sp. (Opossum) : XM_001380843
Equus
sp. (Horse) : XM_001496797
Pan
sp. (Chimpanzee) : XM_524744
Canis
sp. (Dog) : XM_537107
HIX0000717
HIT000352071 (
ENST00000370791
)
(Protein FAM73A;)
genome : 78,245,309 - 78,344,080 (98,772)
query : 1 - 5,262 (5,262/5,288)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000390177
(
BC130387
)
(Protein FAM73A;)
genome : 78,245,321 - 78,341,392 (96,072)
query : 1 - 2,562 (2,562/2,562)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019392 : Protein of unknown function DUF2217
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000502597
(
BC144167
)
(Protein FAM73A;)
genome : 78,245,321 - 78,341,392 (96,072)
query : 1 - 2,565 (2,565/2,565)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR019392 : Protein of unknown function DUF2217
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000491035
(
AK296411
)
(Protein FAM73A;)
genome : 78,245,334 - 78,340,825 (95,492)
query : 1 - 1,871 (1,871/1,871)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019392 : Protein of unknown function DUF2217
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, nucl 7.5, pero 4, plas 3,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000541685 (
ENST00000443751
)
(Protein FAM73A;)
genome : 78,245,334 - 78,340,825 (95,492)
query : 1 - 1,871 (1,871/1,871)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, nucl 7.5, pero 4, plas 3,
E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000017279
(
AK092412
)
(Protein FAM73A;)
genome : 78,245,341 - 78,341,458 (96,118)
query : 1 - 2,608 (2,608/2,608)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019392 : Protein of unknown function DUF2217
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000055706
(
BX641170
)
(Protein FAM73A;)
genome : 78,272,660 - 78,328,628 (55,969)
query : 19 - 4,202 (4,184/4,220)
6 exons
identity = 0.996
5'(1.000;0.996;0.995)3'
coverage = 0.996
InterPro :
IPR019392 : Protein of unknown function DUF2217
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 13, nucl 11, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0000717
HIT000580410 (
ENST00000476203
)
(Protein FAM73A;)
genome : 78,272,660 - 78,328,629 (55,970)
query : 19 - 4,206 (4,188/4,206)
6 exons
identity = 1.000
5'(1.000;1.000;0.997)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 13, nucl 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000717)
HIX0200186
HIT000542001 (
ENST00000444067
)
(Domain of unknown function DUF2040 domain containing protein.)
genome : 78,312,795 - 78,314,487 (1,693)
query : 1 - 1,693 (1,693/1,693)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11.5, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200186)
HIX0161484
HIT000553418 (
ENST00000455484
)
(Chaperonin Cpn10 family protein.)
genome : 78,319,040 - 78,319,578 (539)
query : 1 - 251 (251/251)
2 exons
identity = 0.980
5'(1.000;0.972)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 3, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161484)
HIX0203382
HIT000082153
(
AK075118
)
Representative transcript
(Conserved hypothetical protein.)
genome : 78,347,033 - 78,355,224 (8,192)
query : 3 - 2,273 (2,271/2,273)
3 exons
identity = 0.981
3'(0.971;0.983;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203382)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000043562
HIX0203382
HIT000519265 (
ENST00000421331
)
(Conserved hypothetical protein.)
genome : 78,347,033 - 78,355,224 (8,192)
query : 1 - 2,292 (2,292/2,292)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203382)
HIX0214327
HIT000709533 (
ENST00000597757
)
(Conserved hypothetical protein.)
genome : 78,347,044 - 78,353,374 (6,331)
query : 1 - 731 (731/731)
2 exons
identity = 0.992
5'(1.000;0.984)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214327)
HIX0213842
HIT000306908
(
CR936630
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,290 - 78,390,047 (35,758)
query : 1 - 807 (807/1,020)
6 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;0.993;0.961)3'
coverage = 1.000
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000113904 (
ENST00000294624
)
(Myosin light chain kinase-related family protein.)
genome : 78,354,290 - 78,390,082 (35,793)
query : 1 - 842 (842/842)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 6, cyto 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000085285
(
AY211912
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,347 - 78,392,298 (37,952)
query : 1 - 774 (774/808)
6 exons
identity = 0.959
5'(1.000;1.000;1.000;1.000;0.993;0.840)3'
coverage = 0.958
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000259488
(
BC055084
)
Representative transcript
(Myosin light chain kinase-related family protein.)
genome : 78,381,739 - 78,395,134 (13,396)
query : 22 - 1,030 (1,009/1,050)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.979
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000569713 (
ENST00000464998
)
(Conserved hypothetical protein.)
genome : 78,392,254 - 78,401,655 (9,402)
query : 1 - 859 (859/859)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000487825
(
AK293201
)
(Myosin light chain kinase-related family protein.)
genome : 78,392,504 - 78,408,998 (16,495)
query : 1 - 1,721 (1,721/1,721)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, cyto 16, nucl 15.5, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000047408
(
AK127535
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,397,347 - 78,408,884 (11,538)
query : 1 - 1,972 (1,972/1,972)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.1667, cyto 15.5, nucl 13.5,
cyto_plas 9.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000584730 (
ENST00000480732
)
(Myosin light chain kinase-related family protein.)
genome : 78,397,347 - 78,408,884 (11,538)
query : 1 - 1,973 (1,973/1,973)
5 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.1667, cyto 15.5, nucl 13.5,
cyto_plas 9.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0213842
HIT000575196 (
ENST00000470735
)
(Immunoglobulin I-set domain containing protein.)
genome : 78,407,396 - 78,408,438 (1,043)
query : 1 - 791 (791/791)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213842)
HIX0000720
HIT000023857
(
AL049951
)
(Hypothetical short protein.)
genome : 78,409,742 - 78,411,444 (1,703)
query : 4 - 1,706 (1,703/1,727)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 7, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000055054
(
BX538272
)
(Hypothetical short protein.)
genome : 78,409,740 - 78,414,018 (4,279)
query : 1 - 2,050 (2,050/2,067)
4 exons
identity = 0.998
3'(1.000;1.000;0.999;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, lyso 2, E.R._mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000596193 (
ENST00000492724
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,409,740 - 78,421,024 (11,285)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000595893 (
ENST00000492405
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,409,740 - 78,420,967 (11,228)
query : 1 - 668 (668/668)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 9, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000592442 (
ENST00000488814
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,409,740 - 78,414,952 (5,213)
query : 1 - 612 (612/612)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000593097 (
ENST00000489495
)
(Hypothetical short protein.)
genome : 78,409,740 - 78,414,018 (4,279)
query : 1 - 2,156 (2,156/2,156)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000578912 (
ENST00000474632
)
(Hypothetical short protein.)
genome : 78,409,740 - 78,413,377 (3,638)
query : 1 - 639 (639/639)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000584673 (
ENST00000480673
)
(Hypothetical short protein.)
genome : 78,409,740 - 78,412,261 (2,522)
query : 1 - 262 (262/262)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000587764 (
ENST00000483894
)
(Hypothetical short protein.)
genome : 78,409,740 - 78,411,580 (1,841)
query : 1 - 605 (605/605)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000329301
(
AB209366
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,409,741 - 78,432,400 (22,660)
query : 1 - 5,339 (5,339/5,339)
14 exons
identity = 0.999
3'(1.000;0.999;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR015096 : Domain of unknown function DUF1897
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, pero 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000037902
(
BC017247
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,412,168 - 78,444,753 (32,586)
query : 1 - 2,182 (2,182/2,240)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR015096 : Domain of unknown function DUF1897
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000113903 (
ENST00000294623
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,412,167 - 78,444,771 (32,605)
query : 1 - 2,201 (2,201/2,201)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000200691 (
NM_003902
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,413,591 - 78,444,777 (31,187)
query : 1 - 2,884 (2,884/2,884)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000217578
(
U05040
)
Representative transcript
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,090 - 78,444,714 (30,625)
query : 1 - 2,324 (2,324/2,325)
20 exons
identity = 0.997
3'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR015096 : Domain of unknown function DUF1897
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170995
Gallus
sp. (Chicken) : AJ721024
Mus
sp. (Mouse) : AK160815
Danio
sp. (Zebrafish) : BC064649
Bos
sp. (Cow) : BC123716
Equus
sp. (Horse) : ENSECAT00000011862
Monodelphis
sp. (Opossum) : ENSMODT00000026487
Oryzias
sp. (Medaka) : ENSORLT00000004417
Takifugu
sp. (Fugu) : SINFRUT00000181433
Pan
sp. (Chimpanzee) : XM_513511
Canis
sp. (Dog) : XM_547322
HIX0000720
HIT000352047 (
ENST00000370767
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,090 - 78,444,776 (30,687)
query : 1 - 2,524 (2,524/2,524)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000352048 (
ENST00000370768
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,090 - 78,444,770 (30,681)
query : 1 - 2,378 (2,378/2,378)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000498192
(
AK303568
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,097 - 78,444,756 (30,660)
query : 1 - 2,312 (2,312/2,312)
21 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;0.971;0.848;
1.000;0.973;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR015096 : Domain of unknown function DUF1897
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000496205
(
AK301581
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,258 - 78,444,755 (30,498)
query : 3 - 2,133 (2,131/2,133)
20 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;1.000;0.943;0.904;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 6.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000494656
(
AK300032
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,368 - 78,444,755 (30,388)
query : 3 - 2,150 (2,148/2,150)
21 exons
identity = 0.997
3'(0.989;1.000;1.000;1.000;1.000;0.987;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR015096 : Domain of unknown function DUF1897
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000534520 (
ENST00000436586
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,368 - 78,444,745 (30,378)
query : 1 - 2,138 (2,138/2,138)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000591380 (
ENST00000487684
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,414,655 - 78,421,143 (6,489)
query : 1 - 535 (535/535)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000574769 (
ENST00000470287
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,420,940 - 78,426,470 (5,531)
query : 1 - 726 (726/726)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 8, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000087440
(
BC010083
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,429,984 - 78,444,724 (14,741)
query : 1 - 931 (931/948)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000720
HIT000519575 (
ENST00000421641
)
(Far upstream element-binding protein 1; FBP; FUSE-binding protein 1; DNA helicase V; hDH V;)
genome : 78,430,753 - 78,444,794 (14,042)
query : 1 - 802 (802/802)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000720)
HIX0000721
HIT000591608 (
ENST00000487931
)
(Chaperone DnaJ, C-terminal domain containing protein.)
genome : 78,444,859 - 78,481,958 (37,100)
query : 1 - 949 (949/949)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 13, mito 2, E.R. 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000581807 (
ENST00000477671
)
(HSP40/DnaJ peptide-binding domain containing protein.)
genome : 78,444,916 - 78,479,198 (34,283)
query : 1 - 741 (741/741)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.5, nucl 3, pero 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000492609
(
AK297985
)
(DnaJ homolog subfamily B member 4; Heat shock 40 kDa protein 1 homolog; HSP40 homolog; Heat shock protein 40 homolog; Human liver DnaJ-like protein;)
genome : 78,444,934 - 78,482,490 (37,557)
query : 1 - 1,406 (1,406/1,406)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002939 : Chaperone DnaJ, C-terminal
IPR008971 : HSP40/DnaJ peptide-binding
GO :
0006457 : Biological Process : protein folding
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, golg 3, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000588503 (
ENST00000484662
)
(HSP40/DnaJ peptide-binding domain containing protein.)
genome : 78,444,965 - 78,479,301 (34,337)
query : 1 - 906 (906/906)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 5, pero 3, plas 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000524451 (
ENST00000426517
)
(DnaJ domain containing protein.)
genome : 78,445,868 - 78,479,039 (33,172)
query : 1 - 686 (686/686)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000352043 (
ENST00000370763
)
(DnaJ domain containing protein.)
genome : 78,470,538 - 78,483,648 (13,111)
query : 1 - 2,988 (2,988/2,988)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000219753
(
U40992
)
(DnaJ homolog subfamily B member 4; Heat shock 40 kDa protein 1 homolog; HSP40 homolog; Heat shock protein 40 homolog; Human liver DnaJ-like protein;)
genome : 78,470,619 - 78,482,059 (11,441)
query : 2 - 1,318 (1,317/1,318)
3 exons
identity = 0.998
5'(0.997;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR001623 : DnaJ domain
IPR002939 : Chaperone DnaJ, C-terminal
IPR008971 : HSP40/DnaJ peptide-binding
IPR018253 : DnaJ domain, conserved site
GO :
0006457 : Biological Process : protein folding
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, plas 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000580590 (
ENST00000476396
)
(DnaJ domain containing protein.)
genome : 78,470,619 - 78,481,983 (11,365)
query : 1 - 673 (673/673)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 11.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000432071
(
AK313205
)
(DnaJ homolog subfamily B member 4; Heat shock 40 kDa protein 1 homolog; HSP40 homolog; Heat shock protein 40 homolog; Human liver DnaJ-like protein;)
genome : 78,470,626 - 78,481,931 (11,306)
query : 1 - 1,183 (1,183/1,183)
3 exons
identity = 0.998
5'(1.000;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR001623 : DnaJ domain
IPR002939 : Chaperone DnaJ, C-terminal
IPR008971 : HSP40/DnaJ peptide-binding
IPR018253 : DnaJ domain, conserved site
GO :
0006457 : Biological Process : protein folding
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, plas 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000329857
(
AB209922
)
(DnaJ homolog subfamily B member 4; Heat shock 40 kDa protein 1 homolog; HSP40 homolog; Heat shock protein 40 homolog; Human liver DnaJ-like protein;)
genome : 78,470,634 - 78,483,646 (13,013)
query : 1 - 2,891 (2,891/2,891)
3 exons
identity = 0.999
5'(1.000;0.998;0.999)3'
coverage = 1.000
InterPro :
IPR001623 : DnaJ domain
IPR002939 : Chaperone DnaJ, C-terminal
IPR008971 : HSP40/DnaJ peptide-binding
IPR018253 : DnaJ domain, conserved site
GO :
0006457 : Biological Process : protein folding
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000051216
(
BC034721
)
Representative transcript
(DnaJ homolog subfamily B member 4; Heat shock 40 kDa protein 1 homolog; HSP40 homolog; Heat shock protein 40 homolog; Human liver DnaJ-like protein;)
genome : 78,470,636 - 78,482,994 (12,359)
query : 1 - 2,236 (2,236/2,250)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001623 : DnaJ domain
IPR002939 : Chaperone DnaJ, C-terminal
IPR008971 : HSP40/DnaJ peptide-binding
IPR018253 : DnaJ domain, conserved site
GO :
0006457 : Biological Process : protein folding
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, plas 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0000721
HIT000203574 (
NM_007034
)
(DnaJ domain containing protein.)
genome : 78,470,636 - 78,482,994 (12,359)
query : 1 - 2,236 (2,236/2,250)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, plas 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000721)
HIX0117435
HIT000109621 (
ENST00000265259
)
(Carbon-nitrogen hydrolase domain containing protein.)
genome : 78,509,067 - 78,509,832 (766)
query : 1 - 766 (766/766)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 13, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117435)
HIX0213697
HIT000426288
(
AK307422
)
(PDZ domain-containing protein GIPC2.)
genome : 78,510,646 - 78,601,904 (91,259)
query : 1 - 1,320 (1,320/1,320)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13, nucl 5.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
HIX0213697
HIT000352039 (
ENST00000370759
)
(PDZ domain-containing protein GIPC2;)
genome : 78,511,586 - 78,604,133 (92,548)
query : 1 - 3,847 (3,847/3,847)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
HIX0213697
HIT000051612
(
BC036075
)
(PDZ domain-containing protein GIPC2;)
genome : 78,511,589 - 78,603,112 (91,524)
query : 1 - 2,822 (2,822/2,837)
6 exons
identity = 0.996
5'(0.995;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
HIX0213697
HIT000206534 (
NM_017655
)
(PDZ domain-containing protein GIPC2;)
genome : 78,511,589 - 78,603,112 (91,524)
query : 1 - 2,823 (2,823/2,838)
6 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, mito 3, pero 3,
mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
HIX0213697
HIT000385071
(
AK225941
)
(PDZ domain-containing protein GIPC2;)
genome : 78,511,750 - 78,601,473 (89,724)
query : 1 - 1,023 (1,023/1,023)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
HIX0213697
HIT000061223
(
AB073737
)
Representative transcript
(PDZ domain-containing protein GIPC2;)
genome : 78,511,773 - 78,601,852 (90,080)
query : 1 - 1,379 (1,379/1,379)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC013440
Bos
sp. (Cow) : BC116034
Danio
sp. (Zebrafish) : BC155746
Gallus
sp. (Chicken) : BX932652
Canis
sp. (Dog) : ENSCAFT00000032417
Monodelphis
sp. (Opossum) : ENSMODT00000026481
Oryzias
sp. (Medaka) : ENSORLT00000008560
Pongo
sp. (Orangutan) : ENSPPYT00000001458
Tetraodon
sp. (Tetraodon) : GSTENT00011631001
Takifugu
sp. (Fugu) : SINFRUT00000165048
Macaca
sp. (Macaque) : XM_001104248
Equus
sp. (Horse) : XM_001496582
Pan
sp. (Chimpanzee) : XM_524746
HIX0213697
HIT000002557
(
AK000082
)
(PDZ domain-containing protein GIPC2.)
genome : 78,546,370 - 78,602,927 (56,558)
query : 1 - 2,198 (2,198/2,227)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213697)
HIX0200097
HIT000546279 (
ENST00000448345
)
(Conserved hypothetical protein.)
genome : 78,557,183 - 78,557,738 (556)
query : 1 - 556 (556/556)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200097)
HIX0161142
HIT000540998 (
ENST00000443064
)
(Conserved hypothetical protein.)
genome : 78,636,165 - 78,636,921 (757)
query : 1 - 757 (757/757)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161142)
HIX0021487
HIT000563407 (
NR_027310
)
(Conserved hypothetical protein.)
genome : 78,695,283 - 78,835,149 (139,867)
query : 1 - 1,193 (1,193/1,193)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 12, cyto_nucl 10.8333, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021487)
HIX0021487
HIT000016624
(
AK091757
)
(Conserved hypothetical protein.)
genome : 78,695,283 - 78,759,574 (64,292)
query : 1 - 1,993 (1,993/1,993)
6 exons
identity = 0.998
5'(0.992;0.999;0.997;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_pero 3.5, nucl 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021487)
HIX0021487
HIT000534676 (
ENST00000436742
)
(Conserved hypothetical protein.)
genome : 78,695,283 - 78,759,574 (64,292)
query : 1 - 1,993 (1,993/1,993)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021487)
HIX0021487
HIT000037365
(
BC015860
)
Representative transcript
(Conserved hypothetical protein.)
genome : 78,695,306 - 78,835,146 (139,841)
query : 5 - 1,172 (1,168/1,201)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.995;0.989)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 12, cyto_nucl 10.8333, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021487)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001169490
HIX0021487
HIT000511453 (
ENST00000413519
)
(Conserved hypothetical protein.)
genome : 78,695,306 - 78,835,149 (139,844)
query : 1 - 1,170 (1,170/1,170)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 12, cyto_nucl 10.8333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021487)
HIX0023521
HIT000352038 (
ENST00000370758
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,769,568 - 79,005,434 (235,867)
query : 1 - 4,337 (4,337/4,337)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000051476
(
BC035694
)
Representative transcript
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,769,568 - 79,002,808 (233,241)
query : 1 - 1,711 (1,711/1,750)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB083788
Macaca
sp. (Macaque) : AB172779
Mus
sp. (Mouse) : AK141760
Canis
sp. (Dog) : DQ138060
Gallus
sp. (Chicken) : DQ200257
Equus
sp. (Horse) : DQ385610
Pongo
sp. (Orangutan) : ENSPPYT00000001455
Pan
sp. (Chimpanzee) : ENSPTRT00000059064
Takifugu
sp. (Fugu) : SINFRUT00000149163
Rattus
sp. (Rat) : X83856
Danio
sp. (Zebrafish) : XM_001920568
Danio
sp. (Zebrafish) : XM_695437
HIX0160424
HIT000517041 (
ENST00000419107
)
(Conserved hypothetical protein.)
genome : 78,782,841 - 78,782,947 (107)
query : 1 - 107 (107/107)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12, extr 8, nucl 6.5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160424)
HIX0023521
HIT000383147
(
AB041713
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,163 - 78,959,361 (3,199)
query : 1 - 3,200 (3,200/3,201)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000197967 (
NM_000959
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,728 - 79,006,386 (49,659)
query : 1 - 5,360 (5,360/5,360)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000366468 (
NM_001039585
)
(Prostaglandin F2-alpha receptor isoform b precursor.)
genome : 78,956,728 - 79,006,386 (49,659)
query : 1 - 5,431 (5,431/5,431)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000425642
(
AK292845
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,744 - 79,002,839 (46,096)
query : 1 - 1,797 (1,797/1,797)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000431682
(
AK312816
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,744 - 79,002,372 (45,629)
query : 1 - 1,329 (1,329/1,329)
3 exons
identity = 0.998
5'(1.000;0.999;0.996)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000352036 (
ENST00000370756
)
(Prostaglandin F2-alpha receptor isoform b precursor.)
genome : 78,956,757 - 79,005,434 (48,678)
query : 1 - 4,450 (4,450/4,450)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000352037 (
ENST00000370757
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,757 - 79,005,434 (48,678)
query : 1 - 4,379 (4,379/4,379)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000192594
(
L24470
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,757 - 79,003,550 (46,794)
query : 1 - 2,494 (2,494/2,494)
3 exons
identity = 0.997
5'(1.000;0.999;0.995)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000254890
(
AY485530
)
(Prostaglandin F2-alpha receptor isoform b precursor.)
genome : 78,956,757 - 79,003,550 (46,794)
query : 1 - 2,565 (2,565/2,565)
4 exons
identity = 0.997
5'(1.000;0.999;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000601172 (
ENST00000497923
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,757 - 79,002,695 (45,939)
query : 1 - 1,852 (1,852/1,852)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000340521
(
BC112965
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,817 - 79,002,946 (46,130)
query : 1 - 1,831 (1,831/1,831)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000061728
(
AF004021
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,956,843 - 79,004,218 (47,376)
query : 1 - 3,078 (3,078/3,095)
3 exons
identity = 0.994
5'(1.000;0.999;0.992)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0023521
HIT000251928
(
AY337000
)
(Prostaglandin F2-alpha receptor; PGF receptor; PGF2-alpha receptor; Prostanoid FP receptor;)
genome : 78,958,429 - 79,002,372 (43,944)
query : 1 - 1,080 (1,080/1,080)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000141 : Prostaglandin F receptor
IPR008365 : Prostanoid receptor
GO :
0004958 : Molecular Function : prostaglandin F receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023521)
HIX0000722
HIT000550769 (
ENST00000452835
)
(Interferon-induced protein 44-like.)
genome : 79,085,607 - 79,093,892 (8,286)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.5, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000580710 (
ENST00000476521
)
(Interferon-induced protein 44-like.)
genome : 79,086,067 - 79,107,653 (21,587)
query : 1 - 1,162 (1,162/1,162)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, extr 10, nucl 9.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000203388 (
NM_006820
)
(Interferon-induced protein 44-like;)
genome : 79,086,088 - 79,111,829 (25,742)
query : 1 - 5,873 (5,873/5,889)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 7.5, extr 6, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000352031 (
ENST00000370751
)
(Interferon-induced protein 44-like;)
genome : 79,086,088 - 79,108,484 (22,397)
query : 1 - 2,528 (2,528/2,528)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 7.5, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000134912 (
ENST00000342282
)
(Interferon-induced protein 44-like.)
genome : 79,086,130 - 79,107,863 (21,734)
query : 1 - 1,377 (1,377/1,377)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000499845
(
AK316232
)
(Interferon-induced protein 44-like.)
genome : 79,086,130 - 79,107,863 (21,734)
query : 1 - 1,377 (1,377/1,377)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000488009
(
AK293385
)
(Interferon-induced protein 44-like; Contains: Minor histocompatibility antigen HA-28; HLA-HA28; IFL8;)
genome : 79,086,134 - 79,107,782 (21,649)
query : 4 - 1,446 (1,443/1,446)
9 exons
identity = 0.995
5'(1.000;0.994;0.918;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 0.998
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 10, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000330867
(
AK223087
)
(Interferon-induced protein 44-like;)
genome : 79,086,133 - 79,108,070 (21,938)
query : 1 - 2,081 (2,081/2,103)
9 exons
identity = 0.993
5'(1.000;0.998;1.000;0.995;1.000;0.994;1.000;
1.000;0.981)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, extr 7, nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000497811
(
AK303187
)
(Interferon-induced protein 44-like.)
genome : 79,086,133 - 79,107,936 (21,804)
query : 1 - 1,202 (1,202/1,202)
6 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000564743 (
ENST00000459784
)
(Interferon-induced protein 44-like.)
genome : 79,086,134 - 79,102,846 (16,713)
query : 1 - 745 (745/745)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000057893
(
AB000115
)
(Interferon-induced protein 44-like.)
genome : 79,086,149 - 79,108,069 (21,921)
query : 8 - 2,058 (2,051/2,058)
9 exons
identity = 0.999
5'(1.000;0.996;1.000;0.995;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.997
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 7.5, extr 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000581047 (
ENST00000476876
)
(Interferon-induced protein 44-like.)
genome : 79,086,154 - 79,107,235 (21,082)
query : 1 - 890 (890/890)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000037407
(
BC015932
)
Representative transcript
(Interferon-induced protein 44-like;)
genome : 79,086,161 - 79,108,070 (21,910)
query : 1 - 2,041 (2,041/2,058)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 7.5, extr 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC119997
Danio
sp. (Zebrafish) : BC124820
Danio
sp. (Zebrafish) : BC151896
Danio
sp. (Zebrafish) : BC155645
Oryzias
sp. (Medaka) : ENSORLT00000000858
Pongo
sp. (Orangutan) : ENSPPYT00000001454
Danio
sp. (Zebrafish) : NM_001045218
Macaca
sp. (Macaque) : XM_001100154
Pan
sp. (Chimpanzee) : XM_001169745
Equus
sp. (Horse) : XM_001496470
Rattus
sp. (Rat) : XM_227820
Canis
sp. (Dog) : XM_537104
Danio
sp. (Zebrafish) : XM_677940
HIX0000722
HIT000431138
(
AK312272
)
(Interferon-induced protein 44-like.)
genome : 79,086,161 - 79,107,494 (21,334)
query : 1 - 1,466 (1,466/1,466)
9 exons
identity = 0.995
5'(1.000;0.996;0.980;0.990;1.000;0.988;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000384572
(
AK225442
)
(Interferon-induced protein 44-like;)
genome : 79,086,166 - 79,107,599 (21,434)
query : 1 - 1,565 (1,565/1,565)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 7.5, extr 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000590613 (
ENST00000486882
)
(Interferon-induced protein 44-like.)
genome : 79,091,355 - 79,108,484 (17,130)
query : 1 - 5,152 (5,152/5,152)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, extr 9, nucl 5.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000027530
(
AL832618
)
(Interferon-induced protein 44-like.)
genome : 79,091,355 - 79,108,068 (16,714)
query : 1 - 4,736 (4,736/4,757)
7 exons
identity = 0.997
5'(0.997;0.995;1.000;0.994;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.5, extr 8, nucl 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000566897 (
ENST00000462041
)
(Interferon-induced protein 44-like.)
genome : 79,093,591 - 79,097,332 (3,742)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto_nucl 7.5, cyto 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000548432 (
ENST00000450498
)
(Interferon-induced protein 44-like.)
genome : 79,093,670 - 79,095,872 (2,203)
query : 1 - 849 (849/849)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, extr 7, nucl 5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000578308 (
ENST00000474002
)
(Interferon-induced protein 44-like.)
genome : 79,095,320 - 79,101,668 (6,349)
query : 1 - 928 (928/928)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000598294 (
ENST00000494910
)
(Interferon-induced protein 44-like.)
genome : 79,102,377 - 79,107,170 (4,794)
query : 1 - 664 (664/664)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, cyto_nucl 10, nucl 6, mito 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000722
HIT000383612
(
AB116553
)
(Conserved hypothetical protein.)
genome : 79,109,857 - 79,111,036 (1,180)
query : 1 - 1,180 (1,180/1,199)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, extr 6, cyto_nucl 6, E.R._mito 5.83333,
mito_pero 4.83333, mito 4.5, extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000722)
HIX0000723
HIT000203018 (
NM_006417
)
(Interferon-induced protein 44 family protein.)
genome : 79,115,477 - 79,129,762 (14,286)
query : 1 - 1,725 (1,725/1,742)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 6.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000574803 (
ENST00000470323
)
(Conserved hypothetical protein.)
genome : 79,115,481 - 79,128,441 (12,961)
query : 1 - 819 (819/819)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 2, cyto_nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000039667
(
BC022870
)
Representative transcript
(Interferon-induced protein 44; p44; Microtubule-associated protein 44;)
genome : 79,115,516 - 79,129,757 (14,242)
query : 5 - 1,685 (1,681/1,714)
9 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;1.000;1.000;0.990;
1.000;1.000)3'
coverage = 0.997
InterPro :
IPR006571 : TLDc domain
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, mito 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000352027 (
ENST00000370747
)
(Interferon-induced protein 44 family protein.)
genome : 79,115,516 - 79,129,763 (14,248)
query : 1 - 1,687 (1,687/1,687)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000497151
(
AK302527
)
(Interferon-induced protein 44.)
genome : 79,115,518 - 79,126,691 (11,174)
query : 3 - 1,550 (1,548/1,550)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;0.993;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006571 : TLDc domain
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000499891
(
AK316278
)
(Interferon-induced protein 44.)
genome : 79,115,517 - 79,127,139 (11,623)
query : 1 - 1,530 (1,530/1,530)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.994;0.998)3'
coverage = 1.000
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 6, cyto 4, nucl 2, golg 2, cyto_pero 2,
cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000644169 (
ENST00000545124
)
(Interferon-induced protein 44 family protein.)
genome : 79,115,517 - 79,127,139 (11,623)
query : 1 - 1,530 (1,530/1,530)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 6, cyto 4, nucl 2, golg 2, cyto_pero 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000536420 (
ENST00000438486
)
(Interferon-induced protein 44 family protein.)
genome : 79,115,517 - 79,125,113 (9,597)
query : 1 - 686 (686/686)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 7, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000598623 (
ENST00000495254
)
(Conserved hypothetical protein.)
genome : 79,115,518 - 79,129,763 (14,246)
query : 1 - 1,117 (1,117/1,117)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cysk 8, cyto 7, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000500089
(
AK316476
)
(Interferon-induced protein 44.)
genome : 79,115,519 - 79,126,742 (11,224)
query : 1 - 1,598 (1,598/1,598)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000572390 (
ENST00000467790
)
(TLDc domain containing protein.)
genome : 79,115,527 - 79,121,196 (5,670)
query : 1 - 1,066 (1,066/1,066)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, mito 6, nucl 4.5, extr 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000576542 (
ENST00000472152
)
(Conserved hypothetical protein.)
genome : 79,115,543 - 79,129,763 (14,221)
query : 1 - 917 (917/917)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, nucl 3.5, extr 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000054294
(
BX537508
)
(Interferon-induced protein 44.)
genome : 79,117,799 - 79,129,763 (11,965)
query : 58 - 3,041 (2,984/3,062)
2 exons
identity = 0.985
5'(0.849;0.998)3'
coverage = 0.993
InterPro :
IPR024644 : Interferon-induced protein 44 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000589458 (
ENST00000485662
)
(Conserved hypothetical protein.)
genome : 79,125,004 - 79,129,582 (4,579)
query : 1 - 611 (611/611)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, mito 3, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000581082 (
ENST00000476911
)
(Conserved hypothetical protein.)
genome : 79,128,301 - 79,129,763 (1,463)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0000723
HIT000544420 (
ENST00000446486
)
(Interferon-induced protein 44 family protein.)
genome : 79,128,420 - 79,129,763 (1,344)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000723)
HIX0160672
HIT000525170 (
ENST00000427236
)
(Ribosomal protein L14 domain containing protein.)
genome : 79,131,957 - 79,132,380 (424)
query : 1 - 424 (424/424)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160672)
HIX0161186
HIT000542578 (
ENST00000444644
)
(Conserved hypothetical protein.)
genome : 79,214,758 - 79,216,344 (1,587)
query : 1 - 1,587 (1,587/1,587)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 10, cyto 7, mito 7, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161186)
HIX0000724
HIT000208652 (
NM_022159
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,355,449 - 79,472,495 (117,047)
query : 1 - 3,619 (3,619/3,619)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000352022 (
ENST00000370742
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,355,449 - 79,472,403 (116,955)
query : 1 - 3,527 (3,527/3,527)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000483907 (
ENST00000401034
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1 precursor.)
genome : 79,355,449 - 79,383,570 (28,122)
query : 1 - 501 (501/501)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000049037
(
AK129766
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1 precursor.)
genome : 79,355,451 - 79,385,937 (30,487)
query : 1 - 2,069 (2,069/2,069)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR000832 : GPCR, family 2, secretin-like
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000252404
(
AY358360
)
Representative transcript
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,356,160 - 79,472,362 (116,203)
query : 1 - 2,775 (2,775/2,822)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000203 : GPS motif
IPR000742 : Epidermal growth factor-like domain
IPR000832 : GPCR, family 2, secretin-like
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR022624 : Domain of unknown function DUF3497
IPR023413 : Green fluorescent protein-like
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF192402
Mus
sp. (Mouse) : AF385682
Danio
sp. (Zebrafish) : BC055171
Bos
sp. (Cow) : BC123530
Gallus
sp. (Chicken) : CR354284
Canis
sp. (Dog) : ENSCAFT00000032396
Equus
sp. (Horse) : ENSECAT00000006533
Oryzias
sp. (Medaka) : ENSORLT00000008148
Pongo
sp. (Orangutan) : ENSPPYT00000001451
Tetraodon
sp. (Tetraodon) : GSTENT00019866001
Takifugu
sp. (Fugu) : SINFRUT00000131264
Pan
sp. (Chimpanzee) : XM_001155188
Monodelphis
sp. (Opossum) : XM_001362822
HIX0000724
HIT000073284
(
AF192403
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1 precursor.)
genome : 79,356,190 - 79,412,096 (55,907)
query : 3 - 2,539 (2,537/2,539)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;0.986)5'
coverage = 0.999
InterPro :
IPR000203 : GPS motif
IPR000832 : GPCR, family 2, secretin-like
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR022624 : Domain of unknown function DUF3497
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000039987
(
BC025721
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,356,286 - 79,472,361 (116,076)
query : 1 - 2,648 (2,648/2,673)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000203 : GPS motif
IPR000742 : Epidermal growth factor-like domain
IPR000832 : GPCR, family 2, secretin-like
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR022624 : Domain of unknown function DUF3497
IPR023413 : Green fluorescent protein-like
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000249913
(
AK172750
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1 precursor.)
genome : 79,356,286 - 79,404,903 (48,618)
query : 1 - 2,261 (2,261/2,277)
12 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.994;
0.995;1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000832 : GPCR, family 2, secretin-like
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR022624 : Domain of unknown function DUF3497
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000241955
(
AB032017
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,356,289 - 79,472,428 (116,140)
query : 32 - 2,740 (2,709/2,740)
15 exons
identity = 0.997
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.928)5'
coverage = 0.989
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000203 : GPS motif
IPR000742 : Epidermal growth factor-like domain
IPR000832 : GPCR, family 2, secretin-like
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR022624 : Domain of unknown function DUF3497
IPR023413 : Green fluorescent protein-like
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000425691
(
AK292894
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,356,575 - 79,472,388 (115,814)
query : 1 - 2,386 (2,386/2,386)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
0.995;1.000;1.000;0.994;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000203 : GPS motif
IPR000742 : Epidermal growth factor-like domain
IPR000832 : GPCR, family 2, secretin-like
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR022624 : Domain of unknown function DUF3497
IPR023413 : Green fluorescent protein-like
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0000724
HIT000432604
(
AK313738
)
(EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
genome : 79,356,839 - 79,472,493 (115,655)
query : 2 - 2,228 (2,227/2,228)
15 exons
identity = 0.999
3'(1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000203 : GPS motif
IPR000742 : Epidermal growth factor-like domain
IPR000832 : GPCR, family 2, secretin-like
IPR001881 : EGF-like calcium-binding domain
IPR013032 : EGF-like, conserved site
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR022624 : Domain of unknown function DUF3497
IPR023413 : Green fluorescent protein-like
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000724)
HIX0161014
HIT000537066 (
ENST00000439132
)
(Aminotransferase class V domain containing protein.)
genome : 79,520,630 - 79,521,740 (1,111)
query : 1 - 1,111 (1,111/1,111)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161014)
HIX0160338
HIT000513563 (
ENST00000415629
)
(Conserved hypothetical protein.)
genome : 79,789,454 - 79,790,548 (1,095)
query : 1 - 355 (355/355)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160338)
HIX0160626
HIT000523856 (
ENST00000425922
)
(Alcohol dehydrogenase, C-terminal domain containing protein.)
genome : 79,986,765 - 79,987,888 (1,124)
query : 1 - 1,124 (1,124/1,124)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 8, mito 3, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160626)
HIX0160626
HIT000664129_01 (
ENST00000550377
)
(GroES (chaperonin 10)-like domain containing protein.)
genome : 79,987,785 - 79,987,892 (108)
query : 2 - 109 (108/109)
1 exon
identity = 0.972
5'(0.972)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 4, pero 3, nucl 2, cysk 2, extr_plas 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160626)
HIX0160358
HIT000514204 (
ENST00000416270
)
(Hyaluronan/mRNA-binding protein domain containing protein.)
genome : 80,557,788 - 80,558,922 (1,135)
query : 1 - 1,135 (1,135/1,135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160358)
HIX0000725
HIT000025923
(
AL137635
)
Representative transcript
(Conserved hypothetical protein.)
genome : 80,580,628 - 80,582,598 (1,971)
query : 1 - 1,971 (1,971/1,986)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000725)
HIX0000725
HIT000680881 (
ENST00000567886
)
(Hypothetical short protein.)
genome : 80,580,628 - 80,582,603 (1,976)
query : 1 - 1,976 (1,976/1,976)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000725)
HIX0161003
HIT000536735 (
ENST00000438801
)
(High mobility group box domain containing protein.)
genome : 80,749,037 - 80,749,655 (619)
query : 1 - 619 (619/619)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161003)
HIX0214297
HIT000690217 (
ENST00000578271
)
(Non-protein coding transcript.)
genome : 80,795,064 - 80,795,173 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214297)
HIX0161566
HIT000556080 (
ENST00000458146
)
(Conserved hypothetical protein.)
genome : 80,839,049 - 80,840,306 (1,258)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161566)
HIX0117433
HIT000509608 (
ENST00000411674
)
(RNA recognition motif domain containing protein.)
genome : 80,916,768 - 80,917,689 (922)
query : 1 - 922 (922/922)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 20, plas 4, cyto 2, mito 2, pero 2, extr_plas 2,
cyto_mito 2, mito_pero 2, cyto_pero 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117433)
HIX0160873
HIT000532399 (
ENST00000434465
)
(Conserved hypothetical protein.)
genome : 80,929,986 - 80,930,403 (418)
query : 1 - 418 (418/418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, cyto_plas 12.1667, nucl 5,
extr 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160873)
HIX0161260
HIT000545459 (
ENST00000447525
)
(Conserved hypothetical protein.)
genome : 80,961,588 - 80,961,918 (331)
query : 1 - 331 (331/331)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6.5, cyto_pero 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161260)
HIX0160950
HIT000535014 (
ENST00000437080
)
(Hypothetical short protein.)
genome : 81,000,663 - 81,050,048 (49,386)
query : 1 - 349 (349/349)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160950)
HIX0159808
HIT000515975 (
ENST00000418041
)
(Conserved hypothetical protein.)
genome : 81,001,440 - 81,112,473 (111,034)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto_nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159808)
HIX0159808
HIT000541038 (
ENST00000443104
)
(Conserved hypothetical protein.)
genome : 81,001,440 - 81,112,473 (111,034)
query : 1 - 591 (591/591)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159808)
HIX0159808
HIT000541499 (
ENST00000443565
)
(Conserved hypothetical protein.)
genome : 81,106,969 - 81,112,473 (5,505)
query : 1 - 473 (473/473)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159808)
HIX0161521
HIT000554597 (
ENST00000456663
)
(Hypothetical protein.)
genome : 81,546,475 - 81,546,856 (382)
query : 1 - 382 (382/382)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161521)
HIX0160394
HIT000515341 (
ENST00000417407
)
(Ribosomal protein L30, ferredoxin-like fold domain containing protein.)
genome : 81,563,952 - 81,564,690 (739)
query : 1 - 739 (739/739)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160394)
HIX0160652
HIT000524622 (
ENST00000426688
)
(Ribosomal protein L1/ribosomal biogenesis protein family protein.)
genome : 81,674,253 - 81,674,895 (643)
query : 1 - 643 (643/643)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_nucl 2, golg 2, nucl 1.5,
cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160652)
HIX0160206
HIT000509046 (
ENST00000411094
)
(Hypothetical short protein.)
genome : 81,717,474 - 81,717,781 (308)
query : 1 - 308 (308/308)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 11, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160206)
HIX0000727
HIT000092365
(
BC031321
)
(Hypothetical protein.)
genome : 81,771,845 - 82,201,015 (429,171)
query : 6 - 832 (827/847)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, nucl 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000578037 (
ENST00000473719
)
(Conserved hypothetical protein.)
genome : 81,771,845 - 82,201,015 (429,171)
query : 1 - 827 (827/827)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000352008 (
ENST00000370728
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,851 - 82,458,106 (686,256)
query : 1 - 6,302 (6,302/6,302)
25 exons
identity = 0.999
5'(1.000;0.871;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000352010 (
ENST00000370730
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,851 - 82,458,106 (686,256)
query : 1 - 6,173 (6,173/6,173)
24 exons
identity = 0.999
5'(1.000;0.871;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000352001 (
ENST00000370721
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,851 - 82,457,052 (685,202)
query : 1 - 5,023 (5,023/5,023)
24 exons
identity = 0.997
5'(1.000;0.871;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000352003 (
ENST00000370723
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,851 - 82,457,052 (685,202)
query : 1 - 5,254 (5,254/5,254)
25 exons
identity = 0.998
5'(1.000;0.871;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000352005 (
ENST00000370725
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,851 - 82,457,052 (685,202)
query : 1 - 5,293 (5,293/5,293)
26 exons
identity = 0.998
5'(1.000;0.871;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000352007 (
ENST00000370727
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,851 - 82,457,052 (685,202)
query : 1 - 5,164 (5,164/5,164)
25 exons
identity = 0.998
5'(1.000;0.871;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000596141 (
ENST00000492666
)
(Hypothetical short protein.)
genome : 81,771,877 - 81,880,069 (108,193)
query : 1 - 532 (532/532)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000573900 (
ENST00000469377
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,884 - 82,458,120 (686,237)
query : 1 - 3,151 (3,151/3,151)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, cyto_mito 1.83333, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000043295
(
AK123422
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 81,771,884 - 82,458,106 (686,223)
query : 1 - 3,137 (3,137/3,137)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000922 : D-galactoside/L-rhamnose binding SUEL lectin domain
IPR003334 : GPCR, family 2, latrophilin, C-terminal
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016020 : Cellular Component : membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, cyto_mito 1.83333, mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0161185
HIT000542480 (
ENST00000444546
)
(Conserved hypothetical protein.)
genome : 81,892,141 - 81,893,290 (1,150)
query : 1 - 1,150 (1,150/1,150)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, E.R. 4, cyto 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161185)
HIX0159789
HIT000307273_02 (
ENST00000346246
)
(ARID DNA-binding domain containing protein.)
genome : 81,967,270 - 81,971,426 (4,157)
query : 47 - 4,186 (4,140/4,271)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 0.969
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.8333, cyto 12.5,
cyto_golg 8.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159789)
HIX0159789
HIT000546147_01 (
ENST00000448213
)
(REKLES domain containing protein.)
genome : 81,967,479 - 81,969,153 (1,675)
query : 1 - 1,675 (1,675/1,675)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159789)
HIX0159789
HIT000679194_01 (
ENST00000566147
)
(ARID DNA-binding domain containing protein.)
genome : 81,967,880 - 81,968,610 (731)
query : 1 - 581 (581/581)
2 exons
identity = 0.976
5'(0.986;0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, cyto_nucl 8, nucl 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159789)
HIX0159789
HIT000676713_01 (
ENST00000563567
)
(Hypothetical short protein.)
genome : 81,969,974 - 81,971,357 (1,384)
query : 1 - 520 (520/520)
2 exons
identity = 0.968
5'(0.955;0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159789)
HIX0159789
HIT000536958 (
ENST00000439024
)
(Hypothetical short protein.)
genome : 81,970,784 - 81,971,981 (1,198)
query : 1 - 343 (343/343)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3.5, cyto_nucl 3, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159789)
HIX0159922
HIT000541873 (
ENST00000443939
)
(Hypothetical protein.)
genome : 81,979,565 - 82,023,387 (43,823)
query : 1 - 643 (643/643)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 11.5, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159922)
HIX0159922
HIT000552765 (
ENST00000454831
)
(Mediator complex, subunit Med28 family protein.)
genome : 82,022,806 - 82,023,517 (712)
query : 1 - 521 (521/521)
2 exons
identity = 0.992
3'(1.000;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159922)
HIX0160777
HIT000528682 (
ENST00000430748
)
(Hypothetical short protein.)
genome : 82,051,626 - 82,091,398 (39,773)
query : 1 - 641 (641/641)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160777)
HIX0161010
HIT000536902 (
ENST00000438968
)
(Ribosomal protein S10 family protein.)
genome : 82,061,842 - 82,062,191 (350)
query : 1 - 350 (350/350)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161010)
HIX0000727
HIT000244639
(
AJ131581
)
Representative transcript
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,165,455 - 82,457,110 (291,656)
query : 1 - 4,669 (4,669/4,669)
21 exons
identity = 0.999
5'(1.000;0.976)3'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000832 : GPCR, family 2, secretin-like
IPR000922 : D-galactoside/L-rhamnose binding SUEL lectin domain
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR003112 : Olfactomedin-like
IPR003334 : GPCR, family 2, latrophilin, C-terminal
IPR003924 : GPCR, family 2, latrophilin
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR022624 : Domain of unknown function DUF3497
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF081153
Bos
sp. (Cow) : AF111084
Mus
sp. (Mouse) : AK129215
Gallus
sp. (Chicken) : CR524134
Equus
sp. (Horse) : ENSECAT00000026820
Macaca
sp. (Macaque) : ENSMMUT00000046823
Monodelphis
sp. (Opossum) : ENSMODT00000038433
Oryzias
sp. (Medaka) : ENSORLT00000008096
Pongo
sp. (Orangutan) : ENSPPYT00000001448
Tetraodon
sp. (Tetraodon) : GSTENT00016203001
Takifugu
sp. (Fugu) : SINFRUT00000134139
Pan
sp. (Chimpanzee) : XM_001170200
Canis
sp. (Dog) : XM_547314
Danio
sp. (Zebrafish) : XM_683975
HIX0000727
HIT000313388 (
ENST00000359929
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,165,455 - 82,457,110 (291,656)
query : 1 - 4,674 (4,674/4,674)
21 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0117465
HIT000545930 (
ENST00000447996
)
(Tetratricopeptide repeat-containing domain containing protein.)
genome : 82,187,378 - 82,188,753 (1,376)
query : 1 - 1,065 (1,065/1,065)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117465)
HIX0000727
HIT000204072 (
NM_012302
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,458,107 (192,026)
query : 1 - 5,706 (5,706/5,723)
20 exons
identity = 0.999
5'(0.991)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000110652 (
ENST00000271029
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,458,106 (192,025)
query : 1 - 5,789 (5,789/5,789)
22 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000129797 (
ENST00000335786
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,458,106 (192,025)
query : 1 - 5,744 (5,744/5,744)
21 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000351997 (
ENST00000370717
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,458,106 (192,025)
query : 1 - 5,918 (5,918/5,918)
23 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000478277 (
ENST00000394879
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,458,106 (192,025)
query : 1 - 5,879 (5,879/5,879)
22 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000069417
(
AF104266
)
(Latrophilin-2 precursor.)
genome : 82,266,082 - 82,457,880 (191,799)
query : 1 - 5,585 (5,585/5,585)
22 exons
identity = 0.999
5'(0.991)3'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000832 : GPCR, family 2, secretin-like
IPR000922 : D-galactoside/L-rhamnose binding SUEL lectin domain
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR003112 : Olfactomedin-like
IPR003334 : GPCR, family 2, latrophilin, C-terminal
IPR003924 : GPCR, family 2, latrophilin
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR022624 : Domain of unknown function DUF3497
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000069455
(
AF104938
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,457,880 (191,799)
query : 1 - 5,381 (5,381/5,381)
19 exons
identity = 0.999
5'(0.991)3'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000832 : GPCR, family 2, secretin-like
IPR000922 : D-galactoside/L-rhamnose binding SUEL lectin domain
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR003112 : Olfactomedin-like
IPR003924 : GPCR, family 2, latrophilin
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR022624 : Domain of unknown function DUF3497
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000069456
(
AF104939
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,457,880 (191,799)
query : 1 - 5,479 (5,479/5,479)
20 exons
identity = 0.999
5'(0.991)3'
coverage = 1.000
InterPro :
IPR000203 : GPS motif
IPR000832 : GPCR, family 2, secretin-like
IPR000922 : D-galactoside/L-rhamnose binding SUEL lectin domain
IPR001879 : GPCR, family 2, extracellular hormone receptor domain
IPR003112 : Olfactomedin-like
IPR003334 : GPCR, family 2, latrophilin, C-terminal
IPR003924 : GPCR, family 2, latrophilin
IPR017981 : GPCR, family 2-like
IPR017983 : GPCR, family 2, secretin-like, conserved site
IPR022624 : Domain of unknown function DUF3497
GO :
0004888 : Molecular Function : transmembrane signaling receptor activity
0004930 : Molecular Function : G-protein coupled receptor activity
0005515 : Molecular Function : protein binding
0007166 : Biological Process : cell surface receptor signaling pathway
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007218 : Biological Process : neuropeptide signaling pathway
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000122089 (
ENST00000319517
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,457,880 (191,799)
query : 1 - 5,479 (5,479/5,479)
20 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000351993 (
ENST00000370713
)
(Latrophilin-2; Calcium-independent alpha-latrotoxin receptor 2; CIRL-2; Latrophilin homolog 1; Lectomedin-1; Precursor;)
genome : 82,266,082 - 82,457,880 (191,799)
query : 1 - 5,382 (5,382/5,382)
19 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000727
HIT000351995 (
ENST00000370715
)
(Latrophilin-2 precursor.)
genome : 82,266,082 - 82,457,880 (191,799)
query : 1 - 5,585 (5,585/5,585)
22 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000727)
HIX0000718
HIT000483908 (
ENST00000401035
)
(Nexilin isoform 2.)
genome : 78,354,198 - 78,399,069 (44,872)
query : 1 - 1,263 (1,263/1,263)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000212811 (
NM_144573
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,200 - 78,409,577 (55,378)
query : 1 - 3,388 (3,388/3,405)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13, cyto_golg 8, mito_nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000654900 (
NM_001172309
)
(Nexilin isoform 2.)
genome : 78,354,200 - 78,409,577 (55,378)
query : 1 - 3,196 (3,196/3,213)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17, nucl 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000126426 (
ENST00000330010
)
(Nexilin isoform 2.)
genome : 78,354,200 - 78,409,576 (55,377)
query : 1 - 3,195 (3,195/3,195)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000554964 (
ENST00000457030
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,200 - 78,408,503 (54,304)
query : 1 - 2,272 (2,272/2,286)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 11, cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000493189
(
AK298565
)
(Nexilin isoform 2.)
genome : 78,354,231 - 78,408,621 (54,391)
query : 1 - 2,208 (2,208/2,208)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000495352
(
AK300728
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,267 - 78,409,576 (55,310)
query : 1 - 2,001 (2,001/2,001)
12 exons
identity = 1.000
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15.8333, cyto 11,
cyto_golg 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000426353
(
AK307487
)
(Nexilin isoform 2.)
genome : 78,354,282 - 78,407,888 (53,607)
query : 1 - 1,635 (1,635/1,635)
10 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000057193
(
BX648546
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,313 - 78,399,063 (44,751)
query : 2 - 1,335 (1,334/1,354)
10 exons
identity = 0.996
5'(1.000;1.000;0.995;0.987;0.993;1.000;0.995;
0.989;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000129170 (
ENST00000334785
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,313 - 78,408,909 (54,597)
query : 1 - 2,607 (2,607/2,607)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13, cyto_golg 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000392344
(
DQ464902
)
Representative transcript
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,313 - 78,408,909 (54,597)
query : 1 - 2,607 (2,607/2,607)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13, cyto_golg 8, mito_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC052878
Danio
sp. (Zebrafish) : BC154179
Bos
sp. (Cow) : ENSBTAT00000039125
Monodelphis
sp. (Opossum) : ENSMODT00000026483
Oryzias
sp. (Medaka) : ENSORLT00000006996
Pongo
sp. (Orangutan) : ENSPPYT00000001461
Rattus
sp. (Rat) : ENSRNOT00000016967
Tetraodon
sp. (Tetraodon) : GSTENT00028910001
Takifugu
sp. (Fugu) : SINFRUT00000151352
Pan
sp. (Chimpanzee) : XM_001169260
Equus
sp. (Horse) : XM_001498293
Canis
sp. (Dog) : XM_547323
Macaca
sp. (Macaque) : XR_012325
HIX0000718
HIT000242814
(
AF176780
)
(Nexilin isoform 2.)
genome : 78,354,329 - 78,399,041 (44,713)
query : 1 - 1,101 (1,101/1,130)
9 exons
identity = 0.989
5'(0.991;1.000;1.000;1.000;1.000;1.000;0.994;
0.989;0.893)3'
coverage = 0.989
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000538258 (
ENST00000440324
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,354,347 - 78,401,604 (47,258)
query : 1 - 1,456 (1,456/1,456)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6.5, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000386599
(
BC111395
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,788 - 78,408,907 (25,120)
query : 6 - 2,026 (2,021/2,055)
9 exons
identity = 0.996
5'(0.953;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.997
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.3333, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000069835
(
AF114264
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,813 - 78,409,576 (25,764)
query : 29 - 2,736 (2,708/2,736)
10 exons
identity = 0.999
5'(0.993;1.000;0.995;0.994;1.000;1.000;0.995;
1.000;1.000;1.000)3'
coverage = 0.990
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000014561
(
AK057954
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,808 - 78,408,909 (25,102)
query : 2 - 1,942 (1,941/1,942)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;0.956;1.000;0.995;1.000;
0.999)3'
coverage = 0.999
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000387258
(
BC114444
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,809 - 78,408,615 (24,807)
query : 1 - 1,832 (1,832/1,832)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000387259
(
BC114445
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,809 - 78,408,615 (24,807)
query : 1 - 1,832 (1,832/1,832)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013098 : Immunoglobulin I-set
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000135384 (
ENST00000342754
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,813 - 78,409,580 (25,768)
query : 1 - 2,712 (2,712/2,712)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000216175
(
S67069
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,833 - 78,401,618 (17,786)
query : 1 - 1,041 (1,041/1,041)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0000718
HIT000089418
(
BC017827
)
(Nexilin; F-actin-binding protein; Nelin;)
genome : 78,383,881 - 78,401,598 (17,718)
query : 1 - 931 (931/960)
6 exons
identity = 0.998
5'(0.987;1.000;0.994;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR020675 : Myosin light chain kinase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000718)
HIX0214475
HIT000581053 (
ENST00000476882
)
(Conserved hypothetical protein.)
genome : 78,445,226 - 78,558,488 (113,263)
query : 1 - 312 (312/312)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214475)
AC138392.2
78300001-78405835 F +
NCBI
AC096948.2
78405836-78446525 F +
NCBI
AC103591.3
78446526-78557960 F -
NCBI
AC093118.2
78557961-78617117 F +
NCBI
AL136459.12
78617118-78634955 F +
NCBI
AC096531.2
78634956-78805241 F +
NCBI
AL158841.6
78805242-78914212 F +
NCBI
AL136324.6
78914213-79034451 F +
NCBI
AL354946.8
79034452-79069352 F +
NCBI
AC104837.2
79069353-79220617 F +
NCBI
AC099674.2
79220618-79363137 F +
NCBI
AL596269.6
79363138-79462564 F +
NCBI
AC098651.3
79462565-79533665 F +
NCBI
AC093430.3
79533666-79615972 F +
NCBI
AL122000.11
79615973-79733783 F -
NCBI
AL353651.11
79733784-79825824 F +
NCBI
AL606527.6
79825825-80001793 F +
NCBI
AL627106.8
80001794-80043037 F +
NCBI
AL358533.6
80043038-80144427 F +
NCBI
AL591173.6
80144428-80220723 F +
NCBI
AL360080.21
80220724-80393918 F +
NCBI
AC099671.2
80393919-80547852 F +
NCBI
AC098657.2
80547853-80697213 F +
NCBI
AC095036.2
80697214-80771131 F +
NCBI
AL606519.6
80771132-80845070 F +
NCBI
AL596276.6
80845071-80972468 F +
NCBI
AL136234.12
80972469-81089949 F +
NCBI
AL391062.16
81089950-81153204 F +
NCBI
AL356501.6
81153205-81220230 F +
NCBI
AL137858.4
81220231-81262979 F +
NCBI
AC091613.3
81262980-81407281 F +
NCBI
AC098653.2
81407282-81530816 F -
NCBI
AL592524.4
81530817-81549281 F +
NCBI
AL158218.11
81549282-81652467 F -
NCBI
AL357632.11
81652468-81675280 F +
NCBI
AC093154.2
81675281-81818938 F +
NCBI
AC095035.2
81818939-81964415 F +
NCBI
AL138799.9
81964416-82071106 F +
NCBI
AC117944.2
82071107-82123194 F -
NCBI
AL358939.9
82123195-82283544 F +
NCBI
AL359705.10
82283545-82300000 F +
NCBI