Clickable map CGI

HIX0161186
HIT000542578 ( ENST00000444644 )
  (Conserved hypothetical protein.)
  genome : 79,214,758 - 79,216,344 (1,587)
  query : 1 - 1,587 (1,587/1,587)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto_nucl 10.5, nucl 10, cyto 7, mito 7, plas 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161186)

HIX0000724
HIT000208652 ( NM_022159 )
  (EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
  genome : 79,355,449 - 79,472,495 (117,047)
  query : 1 - 3,619 (3,619/3,619)
  15 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000724)

HIX0000724
HIT000352022 ( ENST00000370742 )
  (EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
  genome : 79,355,449 - 79,472,403 (116,955)
  query : 1 - 3,527 (3,527/3,527)
  15 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000724)

HIX0000724
HIT000483907 ( ENST00000401034 )
  (EGF, latrophilin and seven transmembrane domain-containing protein 1 precursor.)
  genome : 79,355,449 - 79,383,570 (28,122)
  query : 1 - 501 (501/501)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000724)

HIX0000724
HIT000252404 ( AY358360 )
  Representative transcript
  (EGF, latrophilin and seven transmembrane domain-containing protein 1; EGF-TM7-latrophilin-related protein; ETL protein; Precursor;)
  genome : 79,356,160 - 79,472,362 (116,203)
  query : 1 - 2,775 (2,775/2,822)
  15 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      0.995;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  InterPro :
    IPR000152 : EGF-type aspartate/asparagine hydroxylation site
    IPR000203 : GPS motif
    IPR000742 : Epidermal growth factor-like domain
    IPR000832 : GPCR, family 2, secretin-like
    IPR001881 : EGF-like calcium-binding domain
    IPR013032 : EGF-like, conserved site
    IPR017981 : GPCR, family 2-like
    IPR017983 : GPCR, family 2, secretin-like, conserved site
    IPR018097 : EGF-like calcium-binding, conserved site
    IPR022624 : Domain of unknown function DUF3497
    IPR023413 : Green fluorescent protein-like
  GO :
    0004888 : Molecular Function : transmembrane signaling receptor activity
    0004930 : Molecular Function : G-protein coupled receptor activity
    0005509 : Molecular Function : calcium ion binding
    0005515 : Molecular Function : protein binding
    0007166 : Biological Process : cell surface receptor signaling pathway
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
    0007218 : Biological Process : neuropeptide signaling pathway
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral component of membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000724)
  Ortholog candidate  ( -> Evola )
    Rattus sp. (Rat) : AF192402
    Mus sp. (Mouse) : AF385682
    Danio sp. (Zebrafish) : BC055171
    Bos sp. (Cow) : BC123530
    Gallus sp. (Chicken) : CR354284
    Canis sp. (Dog) : ENSCAFT00000032396
    Equus sp. (Horse) : ENSECAT00000006533
    Oryzias sp. (Medaka) : ENSORLT00000008148
    Pongo sp. (Orangutan) : ENSPPYT00000001451
    Tetraodon sp. (Tetraodon) : GSTENT00019866001
    Takifugu sp. (Fugu) : SINFRUT00000131264
    Pan sp. (Chimpanzee) : XM_001155188
    Monodelphis sp. (Opossum) : XM_001362822

HIX0161014
HIT000537066 ( ENST00000439132 )
  (Aminotransferase class V domain containing protein.)
  genome : 79,520,630 - 79,521,740 (1,111)
  query : 1 - 1,111 (1,111/1,111)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 7, nucl 3, mito 3, mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161014)

HIX0160338
HIT000513563 ( ENST00000415629 )
  (Conserved hypothetical protein.)
  genome : 79,789,454 - 79,790,548 (1,095)
  query : 1 - 355 (355/355)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160338)

HIX0160626
HIT000523856 ( ENST00000425922 )
  (Alcohol dehydrogenase, C-terminal domain containing protein.)
  genome : 79,986,765 - 79,987,888 (1,124)
  query : 1 - 1,124 (1,124/1,124)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 12.5, extr 11, cyto_nucl 8, mito 3, nucl 2.5,
    E.R._mito 2.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160626)

HIX0160626
HIT000664129_01 ( ENST00000550377 )
  (GroES (chaperonin 10)-like domain containing protein.)
  genome : 79,987,785 - 79,987,892 (108)
  query : 2 - 109 (108/109)
  1 exon
  identity = 0.972
  5'(0.972)3'
  coverage = 0.991
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 20, extr 4, pero 3, nucl 2, cysk 2, extr_plas 2,
    mito_pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160626)

HIX0160358
HIT000514204 ( ENST00000416270 )
  (Hyaluronan/mRNA-binding protein domain containing protein.)
  genome : 80,557,788 - 80,558,922 (1,135)
  query : 1 - 1,135 (1,135/1,135)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 24, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0160358)

HIX0000725
HIT000025923 ( AL137635 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 80,580,628 - 80,582,598 (1,971)
  query : 1 - 1,971 (1,971/1,986)
  1 exon
  identity = 0.998
  5'(0.998)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 20, cyto 6, nucl 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000725)

HIX0000725
HIT000680881 ( ENST00000567886 )
  (Hypothetical short protein.)
  genome : 80,580,628 - 80,582,603 (1,976)
  query : 1 - 1,976 (1,976/1,976)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, cyto 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0000725)

HIX0161003
HIT000536735 ( ENST00000438801 )
  (High mobility group box domain containing protein.)
  genome : 80,749,037 - 80,749,655 (619)
  query : 1 - 619 (619/619)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 26, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0161003)

HIX0214297
HIT000690217 ( ENST00000578271 )
  (Non-protein coding transcript.)
  genome : 80,795,064 - 80,795,173 (110)
  query : 1 - 110 (110/110)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0214297)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )