bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0162615
HIT000528128 (
ENST00000430194
)
(Conserved hypothetical protein.)
genome : 224,262,985 - 224,263,264 (280)
query : 1 - 280 (280/280)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 10.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162615)
HIX0162431
HIT000520052 (
ENST00000422118
)
(Conserved hypothetical protein.)
genome : 224,363,491 - 224,369,329 (5,839)
query : 1 - 808 (808/808)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, cyto 10, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162431)
HIX0162870
HIT000538275 (
ENST00000440341
)
(Hypothetical short protein.)
genome : 224,370,194 - 224,375,651 (5,458)
query : 1 - 787 (787/787)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162870)
HIX0203972
eHIT000013991 ( ESTsASS_2_92 )
Representative transcript
(Non-protein coding transcript.)
genome : 224,450,463 - 224,452,513 (2,051)
query : 1 - 321 (321/321)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203972)
ESTs used for assembly :
BQ081913
HIX0002882
HIT000200294 (
NM_003469
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,461,659 - 224,467,217 (5,559)
query : 1 - 2,571 (2,571/2,586)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 6, cyto_nucl 4.33333, cyto_pero 4.33333,
E.R. 2, golg 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0002882
HIT000039589
(
BC022509
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,461,659 - 224,467,121 (5,463)
query : 5 - 2,479 (2,475/2,494)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.998
InterPro :
IPR001990 : Chromogranin/secretogranin
IPR018054 : Chromogranin, conserved site
GO :
0030141 : Cellular Component : secretory granule
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 6, cyto_nucl 4.33333, cyto_pero 4.33333,
E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0002882
HIT000117022 (
ENST00000305409
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,461,658 - 224,467,221 (5,564)
query : 1 - 2,576 (2,576/2,576)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 6, cyto_nucl 4.33333, cyto_pero 4.33333,
E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0002882
HIT000195010
(
M25756
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,461,727 - 224,467,050 (5,324)
query : 1 - 2,336 (2,336/2,336)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR001990 : Chromogranin/secretogranin
IPR018054 : Chromogranin, conserved site
GO :
0030141 : Cellular Component : secretory granule
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 6, cyto_nucl 4.33333, cyto_pero 4.33333,
E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0002882
HIT000493452
(
AK298828
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,461,728 - 224,467,078 (5,351)
query : 1 - 1,943 (1,943/1,943)
3 exons
identity = 0.997
3'(1.000;0.982;1.000)5'
coverage = 1.000
InterPro :
IPR001990 : Chromogranin/secretogranin
IPR018054 : Chromogranin, conserved site
GO :
0030141 : Cellular Component : secretory granule
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 4, cyto_pero 4, mito 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0002882
HIT000431318
(
AK312452
)
Representative transcript
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,462,147 - 224,467,078 (4,932)
query : 1 - 1,944 (1,944/1,944)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001990 : Chromogranin/secretogranin
IPR018054 : Chromogranin, conserved site
GO :
0030141 : Cellular Component : secretory granule
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 6, cyto_nucl 4.33333, cyto_pero 4.33333,
E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170590
Mus
sp. (Mouse) : BC014717
Rattus
sp. (Rat) : BC061549
Gallus
sp. (Chicken) : BX932277
Pongo
sp. (Orangutan) : CR861220
Equus
sp. (Horse) : ENSECAT00000013378
Oryzias
sp. (Medaka) : ENSORLT00000011565
Bos
sp. (Cow) : J05468
Takifugu
sp. (Fugu) : SINFRUT00000179428
Pan
sp. (Chimpanzee) : XM_001166646
Danio
sp. (Zebrafish) : XM_001332570
Monodelphis
sp. (Opossum) : XM_001365524
Canis
sp. (Dog) : XM_545669
HIX0002882
HIT000519320 (
ENST00000421386
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,463,569 - 224,467,002 (3,434)
query : 1 - 589 (589/589)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 4, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0002882
HIT000531823 (
ENST00000433889
)
(Secretogranin-2; Chromogranin-C; Secretogranin II; SgII; Contains: Secretoneurin; SN; Precursor;)
genome : 224,463,624 - 224,467,079 (3,456)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 4, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002882)
HIX0163022
HIT000544528 (
ENST00000446594
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 224,569,338 - 224,570,055 (718)
query : 1 - 718 (718/718)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163022)
HIX0162051
HIT000455450_03
(
DQ588919
)
Representative transcript
(Non-protein coding transcript.)
genome : 224,580,171 - 224,580,200 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162051)
HIX0017772
HIT000034469
(
BC009606
)
(AP-1 complex subunit sigma-3; Adapter-related protein complex 1 sigma-1C subunit; Adaptor protein complex AP-1 sigma-1C subunit; Clathrin assembly protein complex 1 sigma-1C small chain; Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; Sigma 1C subunit of AP-1 clathrin; Sigma-adaptin 1C; Sigma1C-adaptin;)
genome : 224,616,414 - 224,702,319 (85,906)
query : 2 - 1,772 (1,771/1,801)
5 exons
identity = 0.993
3'(0.990;1.000;1.000;1.000;0.994)5'
coverage = 0.999
InterPro :
IPR000804 : Clathrin adaptor complex, small chain
IPR011012 : Longin-like domain
IPR016635 : Adaptor protein complex, sigma subunit
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0008565 : Molecular Function : protein transporter activity
0015031 : Biological Process : protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 9, cyto_nucl 8.5, extr 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000541634 (
ENST00000443700
)
(AP-1 complex subunit sigma-3; Adapter-related protein complex 1 sigma-1C subunit; Adaptor protein complex AP-1 sigma-1C subunit; Clathrin assembly protein complex 1 sigma-1C small chain; Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; Sigma 1C subunit of AP-1 clathrin; Sigma-adaptin 1C; Sigma1C-adaptin;)
genome : 224,616,414 - 224,702,319 (85,906)
query : 1 - 1,774 (1,774/1,785)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 9, cyto_nucl 8.5, extr 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000366456 (
NM_001039569
)
(AP-1 complex subunit sigma-3.)
genome : 224,620,047 - 224,702,319 (82,273)
query : 1 - 4,002 (4,002/4,005)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 3, E.R._mito 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000513232 (
ENST00000415298
)
(AP-1 complex subunit sigma-3.)
genome : 224,621,722 - 224,702,452 (80,731)
query : 1 - 2,499 (2,499/2,515)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 9, cyto_pero 9, cyto_plas 9,
cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000039299
(
BC021898
)
(AP-1 complex subunit sigma-3.)
genome : 224,621,722 - 224,702,263 (80,542)
query : 1 - 2,310 (2,310/2,326)
6 exons
identity = 0.999
3'(0.999;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000804 : Clathrin adaptor complex, small chain
IPR011012 : Longin-like domain
IPR016635 : Adaptor protein complex, sigma subunit
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0008565 : Molecular Function : protein transporter activity
0015031 : Biological Process : protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 9, cyto_pero 9, cyto_plas 9,
cyto_golg 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000008612
(
AK025338
)
(AP-1 complex subunit sigma-3.)
genome : 224,621,725 - 224,702,287 (80,563)
query : 1 - 2,183 (2,183/2,201)
4 exons
identity = 0.998
3'(0.998;1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR011012 : Longin-like domain
IPR016635 : Adaptor protein complex, sigma subunit
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
0008565 : Molecular Function : protein transporter activity
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_nucl 10.5, extr 6, cyto 5, nucl 4,
extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000128858 (
ENST00000334271
)
(AP-1 complex subunit sigma-3.)
genome : 224,621,722 - 224,702,287 (80,566)
query : 1 - 2,186 (2,186/2,201)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_nucl 10.5, extr 6, cyto 5, nucl 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000479981 (
ENST00000396654
)
(AP-1 complex subunit sigma-3.)
genome : 224,623,199 - 224,702,299 (79,101)
query : 1 - 830 (830/830)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000493650
(
AK299026
)
(AP-1 complex subunit sigma-3.)
genome : 224,623,199 - 224,702,299 (79,101)
query : 1 - 830 (830/830)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR000804 : Clathrin adaptor complex, small chain
IPR011012 : Longin-like domain
IPR016635 : Adaptor protein complex, sigma subunit
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0008565 : Molecular Function : protein transporter activity
0015031 : Biological Process : protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, nucl 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000479980 (
ENST00000396653
)
(AP-1 complex subunit sigma-3; Adapter-related protein complex 1 sigma-1C subunit; Adaptor protein complex AP-1 sigma-1C subunit; Clathrin assembly protein complex 1 sigma-1C small chain; Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; Sigma 1C subunit of AP-1 clathrin; Sigma-adaptin 1C; Sigma1C-adaptin;)
genome : 224,629,795 - 224,702,299 (72,505)
query : 1 - 589 (589/589)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto 9, mito_nucl 9, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000078862
(
AF393369
)
Representative transcript
(AP-1 complex subunit sigma-3; Adapter-related protein complex 1 sigma-1C subunit; Adaptor protein complex AP-1 sigma-1C subunit; Clathrin assembly protein complex 1 sigma-1C small chain; Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; Sigma 1C subunit of AP-1 clathrin; Sigma-adaptin 1C; Sigma1C-adaptin;)
genome : 224,629,894 - 224,702,201 (72,308)
query : 1 - 499 (499/499)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000804 : Clathrin adaptor complex, small chain
IPR011012 : Longin-like domain
IPR016635 : Adaptor protein complex, sigma subunit
IPR022775 : AP complex, mu/sigma subunit
GO :
0006810 : Biological Process : transport
0006886 : Biological Process : intracellular protein transport
0008565 : Molecular Function : protein transporter activity
0015031 : Biological Process : protein transport
0016192 : Biological Process : vesicle-mediated transport
0030117 : Cellular Component : membrane coat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC098237
Bos
sp. (Cow) : BC142333
Gallus
sp. (Chicken) : BX931554
Danio
sp. (Zebrafish) : ENSDART00000038228
Oryzias
sp. (Medaka) : ENSORLT00000019893
Oryzias
sp. (Medaka) : ENSORLT00000020516
Pongo
sp. (Orangutan) : ENSPPYT00000015378
Pan
sp. (Chimpanzee) : ENSPTRT00000024048
Rattus
sp. (Rat) : ENSRNOT00000032538
Takifugu
sp. (Fugu) : SINFRUT00000173410
Macaca
sp. (Macaque) : XM_001098858
Monodelphis
sp. (Opossum) : XM_001374310
Equus
sp. (Horse) : XM_001493258
Canis
sp. (Dog) : XM_536088
HIX0017772
HIT000543949 (
ENST00000446015
)
(AP-1 complex subunit sigma-3; Adapter-related protein complex 1 sigma-1C subunit; Adaptor protein complex AP-1 sigma-1C subunit; Clathrin assembly protein complex 1 sigma-1C small chain; Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; Sigma 1C subunit of AP-1 clathrin; Sigma-adaptin 1C; Sigma1C-adaptin;)
genome : 224,629,894 - 224,702,201 (72,308)
query : 1 - 499 (499/499)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000542342 (
ENST00000444408
)
(AP-1 complex subunit sigma-3.)
genome : 224,629,985 - 224,702,744 (72,760)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 8.5, extr 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000507407 (
ENST00000409375
)
(AP-1 complex subunit sigma-3.)
genome : 224,630,027 - 224,702,258 (72,232)
query : 1 - 552 (552/552)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, mito 9, cyto_nucl 9, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0017772
HIT000521044 (
ENST00000423110
)
(AP-1 complex subunit sigma-3.)
genome : 224,638,045 - 224,702,299 (64,255)
query : 1 - 447 (447/447)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 9, cyto_pero 9, cyto_plas 9,
cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017772)
HIX0002883
HIT000567525 (
ENST00000462702
)
(Conserved hypothetical protein.)
genome : 224,720,433 - 224,743,405 (22,973)
query : 1 - 361 (361/361)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 5, cyto 5, mito 5, cyto_nucl 5,
cyto_mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000052415
(
BC040525
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,740,065 - 224,810,016 (69,952)
query : 1 - 4,572 (4,572/4,725)
12 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR001680 : WD40 repeat
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000262112
(
BC065934
)
Representative transcript
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,740,065 - 224,810,048 (69,984)
query : 1 - 4,605 (4,605/4,619)
12 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR001680 : WD40 repeat
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720946
Mus
sp. (Mouse) : AK165554
Rattus
sp. (Rat) : BC085807
Bos
sp. (Cow) : BC112463
Danio
sp. (Zebrafish) : ENSDART00000027019
Equus
sp. (Horse) : ENSECAT00000020056
Monodelphis
sp. (Opossum) : ENSMODT00000026969
Oryzias
sp. (Medaka) : ENSORLT00000011640
Pongo
sp. (Orangutan) : ENSPPYT00000015379
Tetraodon
sp. (Tetraodon) : GSTENT00026728001
Takifugu
sp. (Fugu) : SINFRUT00000137159
Pan
sp. (Chimpanzee) : XM_001166904
Canis
sp. (Dog) : XM_545670
Macaca
sp. (Macaque) : XR_013603
HIX0002883
HIT000104443 (
ENST00000233055
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,740,064 - 224,810,104 (70,041)
query : 1 - 4,660 (4,660/4,660)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000208078 (
NM_020830
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,740,065 - 224,810,052 (69,988)
query : 1 - 4,607 (4,607/4,607)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000006162
(
AK022888
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,740,066 - 224,810,030 (69,965)
query : 1 - 4,585 (4,585/4,585)
12 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR001680 : WD40 repeat
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000001150
(
AB037856
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,740,066 - 224,810,017 (69,952)
query : 1 - 4,574 (4,574/4,574)
12 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000006689
(
AK023415
)
(Conserved hypothetical protein.)
genome : 224,742,040 - 224,810,027 (67,988)
query : 1 - 2,478 (2,478/2,478)
10 exons
identity = 0.996
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.952;0.970)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto_nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000247063
(
AJ310568
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,742,890 - 224,810,090 (67,201)
query : 2 - 1,821 (1,820/1,821)
12 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000306 : FYVE zinc finger
IPR001680 : WD40 repeat
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000079262
(
AF411977
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,743,388 - 224,810,001 (66,614)
query : 1 - 1,233 (1,233/1,233)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR001680 : WD40 repeat
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 14, nucl 11,
cyto_pero 9.33333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000594977 (
ENST00000491453
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,749,386 - 224,759,177 (9,792)
query : 1 - 308 (308/308)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000596460 (
ENST00000493001
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,758,952 - 224,763,993 (5,042)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6.5, cyto_nucl 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000527849 (
ENST00000429915
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,759,007 - 224,810,074 (51,068)
query : 1 - 719 (719/719)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.1667, nucl 12, cyto 8, extr 7,
cyto_pero 7, mito_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002883
HIT000586967 (
ENST00000483061
)
(WD repeat and FYVE domain-containing protein 1; FENS-1; Phosphoinositide-binding protein 1; WD40- and FYVE domain-containing protein 1; Zinc finger FYVE domain-containing protein 17;)
genome : 224,765,572 - 224,810,052 (44,481)
query : 1 - 864 (864/864)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.6667, extr 8, cyto 6.5,
cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002883)
HIX0002884
HIT000008464
(
AK025190
)
Representative transcript
(Conserved hypothetical protein.)
genome : 224,800,797 - 224,803,108 (2,312)
query : 1 - 2,313 (2,313/2,334)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002884)
HIX0161896
HIT000091525
(
BC028181
)
Representative transcript
(Conserved hypothetical protein.)
genome : 224,803,589 - 224,804,804 (1,216)
query : 32 - 1,247 (1,216/1,267)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8, nucl 7.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161896)
HIX0002885
HIT000208938 (
NM_022915
)
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,822,121 - 224,832,430 (10,310)
query : 1 - 1,747 (1,747/1,772)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.26.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
HIX0002885
HIT000107281 (
ENST00000258383
)
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,822,121 - 224,832,431 (10,311)
query : 1 - 1,748 (1,748/1,748)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.26.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
HIX0002885
HIT000006037
(
AK022763
)
Representative transcript
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,822,172 - 224,832,424 (10,253)
query : 1 - 1,690 (1,690/1,690)
4 exons
identity = 0.996
5'(1.000;0.998;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.1.26.-
InterPro :
IPR000999 : Ribonuclease III domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0004525 : Molecular Function : ribonuclease III activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK156814
Rattus
sp. (Rat) : BC098715
Bos
sp. (Cow) : BC112531
Danio
sp. (Zebrafish) : BC133990
Pongo
sp. (Orangutan) : CR857375
Canis
sp. (Dog) : ENSCAFT00000025718
Oryzias
sp. (Medaka) : ENSORLT00000014874
Takifugu
sp. (Fugu) : SINFRUT00000149904
Monodelphis
sp. (Opossum) : XM_001374224
Equus
sp. (Horse) : XM_001495862
Pan
sp. (Chimpanzee) : XM_526045
HIX0002885
HIT000035625
(
BC012058
)
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,822,175 - 224,831,905 (9,731)
query : 1 - 1,168 (1,168/1,185)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.1.26.-
InterPro :
IPR000999 : Ribonuclease III domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0004525 : Molecular Function : ribonuclease III activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
HIX0002885
HIT000007326
(
AK024052
)
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,822,179 - 224,832,424 (10,246)
query : 1 - 1,685 (1,685/1,685)
4 exons
identity = 0.993
5'(1.000;0.998;0.994;0.989)3'
coverage = 1.000
EC number :
EC 3.1.26.-
InterPro :
IPR000999 : Ribonuclease III domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0004525 : Molecular Function : ribonuclease III activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, mito_pero 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
HIX0002885
HIT000268143
(
CR457293
)
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,822,190 - 224,831,750 (9,561)
query : 1 - 998 (998/999)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.994)3'
coverage = 0.999
EC number :
EC 3.1.26.-
InterPro :
IPR000999 : Ribonuclease III domain
IPR014720 : Double-stranded RNA-binding domain
GO :
0003723 : Molecular Function : RNA binding
0004525 : Molecular Function : ribonuclease III activity
0006396 : Biological Process : RNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
HIX0002885
HIT000019862
(
AK095007
)
(39S ribosomal protein L44, mitochondrial; L44mt; MRP-L44; EC=3.1.26.-; Precursor;)
genome : 224,828,229 - 224,830,952 (2,724)
query : 1 - 2,724 (2,724/2,724)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 3.1.26.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, cyto_nucl 13, mito 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002885)
HIX0162495
HIT000523126 (
ENST00000425192
)
(Hypothetical short protein.)
genome : 224,830,418 - 224,832,423 (2,006)
query : 1 - 429 (429/429)
2 exons
identity = 0.991
3'(1.000;0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162495)
HIX0214679
HIT000056106
(
BX647459
)
Representative transcript
(Conserved hypothetical protein.)
genome : 224,839,872 - 224,847,497 (7,626)
query : 1 - 5,984 (5,984/6,001)
2 exons
identity = 0.998
3'(0.995;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0214679
HIT000577543 (
ENST00000473202
)
(Serpin domain containing protein.)
genome : 224,839,870 - 224,847,497 (7,628)
query : 1 - 5,989 (5,989/5,989)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0214679
HIT000246626
(
AJ293400
)
(Hypothetical short protein.)
genome : 224,839,937 - 224,840,382 (446)
query : 19 - 464 (446/485)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.920
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, extr 7, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0214679
HIT000583050 (
ENST00000478966
)
(Serpin domain containing protein.)
genome : 224,840,531 - 224,849,785 (9,255)
query : 1 - 680 (680/680)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0214679
HIT000530672 (
ENST00000432738
)
(Serpin family protein.)
genome : 224,849,526 - 224,878,666 (29,141)
query : 1 - 988 (988/988)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0030184
HIT000249556
(
AK131268
)
Representative transcript
(Conserved hypothetical protein.)
genome : 224,853,070 - 224,855,875 (2,806)
query : 1 - 2,804 (2,804/2,804)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, extr_plas 7, plas 6.5, extr 6.5, pero 4,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030184)
HIX0214679
HIT000592682 (
ENST00000489065
)
(Serpin family protein.)
genome : 224,866,269 - 224,904,007 (37,739)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0214679
HIT000552890 (
ENST00000454956
)
(Serpin family protein.)
genome : 224,866,358 - 224,904,035 (37,678)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0214679
HIT000521380 (
ENST00000423446
)
(Serpin family protein.)
genome : 224,866,491 - 224,895,518 (29,028)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214679)
HIX0162115
HIT000503839 (
ENST00000401725
)
(Conserved hypothetical protein.)
genome : 225,034,381 - 225,036,254 (1,874)
query : 1 - 1,874 (1,874/1,874)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 6, cyto 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162115)
HIX0162726
HIT000532188 (
ENST00000434254
)
(Ubiquitin family protein.)
genome : 225,159,647 - 225,160,470 (824)
query : 1 - 824 (824/824)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21.6667, cyto 21.5, cyto_plas 13.3333,
nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162726)
HIX0002887
HIT000040006
(
BC025754
)
Representative transcript
(Protein FAM124B isoform a.)
genome : 225,243,415 - 225,266,711 (23,297)
query : 1 - 2,594 (2,594/2,693)
3 exons
identity = 0.999
3'(1.000;0.977;1.000)5'
coverage = 1.000
InterPro :
IPR029380 : FAM124
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, extr 10, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF251153
Mus
sp. (Mouse) : AK043867
Oryzias
sp. (Medaka) : ENSORLT00000014207
Pongo
sp. (Orangutan) : ENSPPYT00000015382
Pan
sp. (Chimpanzee) : ENSPTRT00000024057
Takifugu
sp. (Fugu) : SINFRUT00000162476
Rattus
sp. (Rat) : XM_001060512
Macaca
sp. (Macaque) : XM_001109310
Gallus
sp. (Chicken) : XM_001234633
Monodelphis
sp. (Opossum) : XM_001374154
Equus
sp. (Horse) : XM_001496040
Canis
sp. (Dog) : XM_543270
Danio
sp. (Zebrafish) : XM_696179
HIX0002887
HIT000209476 (
NM_024785
)
(Protein FAM124B isoform a.)
genome : 225,243,415 - 225,266,711 (23,297)
query : 1 - 2,594 (2,594/2,693)
3 exons
identity = 0.999
3'(1.000;0.977;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, extr 10, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0002887
HIT000486054 (
NM_001122779
)
(Protein FAM124B isoform a.)
genome : 225,243,415 - 225,266,711 (23,297)
query : 1 - 2,469 (2,469/2,568)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0002887
HIT000009673
(
AK026399
)
(Protein FAM124B isoform b.)
genome : 225,243,415 - 225,266,751 (23,337)
query : 1 - 2,507 (2,507/2,526)
2 exons
identity = 0.997
3'(0.998;0.995)5'
coverage = 1.000
InterPro :
IPR029380 : FAM124
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0002887
HIT000507713 (
ENST00000409685
)
(Protein FAM124B isoform a.)
genome : 225,243,415 - 225,266,751 (23,337)
query : 1 - 2,509 (2,509/2,509)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0002887
HIT000396762 (
ENST00000389874
)
(Protein FAM124B isoform b.)
genome : 225,243,415 - 225,266,711 (23,297)
query : 1 - 2,594 (2,594/2,594)
3 exons
identity = 0.999
3'(1.000;0.977;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, extr 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0002887
HIT000082161
(
AK075126
)
(Protein FAM124B isoform a.)
genome : 225,243,416 - 225,266,214 (22,799)
query : 1 - 2,096 (2,096/2,096)
3 exons
identity = 0.998
3'(0.999;0.977;1.000)5'
coverage = 1.000
InterPro :
IPR029380 : FAM124
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0002887
HIT000105320 (
ENST00000243806
)
(Protein FAM124B isoform b.)
genome : 225,264,242 - 225,266,802 (2,561)
query : 1 - 2,030 (2,030/2,030)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, extr 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002887)
HIX0214934
HIT000083089
(
AY007151
)
Representative transcript
(Hypothetical short protein.)
genome : 225,337,467 - 225,338,546 (1,080)
query : 1 - 1,080 (1,080/1,095)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 10, nucl 1, cyto 1, E.R. 1, cyto_nucl 1,
lyso 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214934)
HIX0002888
HIT000092450
(
BC031844
)
(Cullin, N-terminal domain containing protein.)
genome : 225,338,626 - 225,370,694 (32,069)
query : 1 - 1,459 (1,459/1,519)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000220521
(
U58089
)
Representative transcript
(Cullin-3; CUL-3;)
genome : 225,338,622 - 225,378,321 (39,700)
query : 1 - 2,074 (2,074/2,092)
12 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000023361
(
AK098531
)
(Cullin-3; CUL-3;)
genome : 225,338,619 - 225,344,841 (6,223)
query : 2 - 2,406 (2,405/2,406)
2 exons
identity = 0.995
3'(1.000;0.993)5'
coverage = 1.000
InterPro :
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000600976 (
ENST00000497715
)
(Cullin protein, neddylation domain containing protein.)
genome : 225,338,619 - 225,344,841 (6,223)
query : 1 - 2,400 (2,400/2,400)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000552257 (
ENST00000454323
)
(Cullin protein, neddylation domain containing protein.)
genome : 225,338,627 - 225,360,623 (21,997)
query : 1 - 688 (688/688)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 9, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000064342
(
AF052147
)
(Cullin-3; CUL-3;)
genome : 225,338,650 - 225,368,540 (29,891)
query : 16 - 1,430 (1,415/1,448)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 0.990
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000549472 (
ENST00000451538
)
(Cullin, N-terminal domain containing protein.)
genome : 225,338,750 - 225,362,536 (23,787)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000635747 (
ENST00000536702
)
(Cullin, N-terminal domain containing protein.)
genome : 225,343,020 - 225,350,101 (7,082)
query : 1 - 404 (404/404)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000591256 (
ENST00000487558
)
(Cullin, N-terminal domain containing protein.)
genome : 225,359,723 - 225,365,114 (5,392)
query : 1 - 1,093 (1,093/1,093)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, plas 10, E.R._mito 10, mito_pero 10,
mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0162873
HIT000538351 (
ENST00000440417
)
(Ankyrin repeat-containing domain containing protein.)
genome : 225,364,104 - 225,364,817 (714)
query : 1 - 714 (714/714)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162873)
HIX0002888
HIT000585118 (
ENST00000481135
)
(Cullin, N-terminal domain containing protein.)
genome : 225,367,709 - 225,369,041 (1,333)
query : 1 - 754 (754/754)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000587945 (
ENST00000484081
)
(Cullin, N-terminal domain containing protein.)
genome : 225,370,466 - 225,376,128 (5,663)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9, extr 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000640593 (
ENST00000541548
)
(Cullin, N-terminal domain containing protein.)
genome : 225,376,155 - 225,397,811 (21,657)
query : 1 - 535 (535/535)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000530194 (
ENST00000432260
)
(Cullin, N-terminal domain containing protein.)
genome : 225,378,332 - 225,422,537 (44,206)
query : 1 - 587 (587/587)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000534106 (
ENST00000436172
)
(Cullin, N-terminal domain containing protein.)
genome : 225,379,353 - 225,428,037 (48,685)
query : 1 - 576 (576/576)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002888
HIT000645147 (
ENST00000546102
)
(Cullin, N-terminal domain containing protein.)
genome : 225,400,324 - 225,425,385 (25,062)
query : 1 - 557 (557/557)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.6667, cyto 17, cyto_plas 10.6667,
nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002888)
HIX0002889
HIT000002702
(
AK000227
)
(Conserved hypothetical protein.)
genome : 225,629,807 - 225,661,715 (31,909)
query : 1 - 2,400 (2,400/2,422)
14 exons
identity = 0.998
3'(0.996;0.993;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, cyto_nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000306515
(
CR749492
)
Representative transcript
(Dedicator of cytokinesis C-terminal domain containing protein.)
genome : 225,629,807 - 225,698,913 (69,107)
query : 1 - 4,276 (4,276/4,295)
31 exons
identity = 0.999
3'(0.997;1.000;0.990;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.979)5'
coverage = 1.000
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR027357 : DHR-2 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_nucl 8.5, cyto 8, nucl 7, mito 5.5,
E.R._mito 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000330075
(
AF250396
)
(Dedicator of cytokinesis family protein.)
genome : 225,629,807 - 225,664,980 (35,174)
query : 2 - 2,783 (2,782/2,801)
16 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.967;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000036964
(
BC015018
)
(Dedicator of cytokinesis family protein.)
genome : 225,629,807 - 225,661,713 (31,907)
query : 1 - 2,398 (2,398/2,413)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto_nucl 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000003727
(
AK001253
)
(Conserved hypothetical protein.)
genome : 225,629,802 - 225,658,167 (28,366)
query : 1 - 2,036 (2,036/2,036)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000328514
(
AB074179
)
(Dedicator of cytokinesis family protein.)
genome : 225,629,807 - 225,658,157 (28,351)
query : 1 - 2,022 (2,022/2,026)
11 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 11, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000488503
(
AK293879
)
(Dedicator of cytokinesis family protein.)
genome : 225,630,054 - 225,681,369 (51,316)
query : 1 - 3,574 (3,574/3,574)
27 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.967;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10.5, extr 10, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000426780
(
AK307914
)
(Dedicator of cytokinesis family protein.)
genome : 225,630,063 - 225,664,974 (34,912)
query : 1 - 2,536 (2,536/2,536)
16 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000)5'
coverage = 1.000
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, nucl 9, extr 4, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000488471
(
AK293847
)
(Dedicator of cytokinesis family protein.)
genome : 225,630,333 - 225,670,225 (39,893)
query : 1 - 2,907 (2,907/2,907)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000634708 (
ENST00000535663
)
(Dedicator of cytokinesis C-terminal domain containing protein.)
genome : 225,637,958 - 225,651,835 (13,878)
query : 1 - 568 (568/568)
4 exons
identity = 0.993
3'(1.000;1.000;1.000;0.961)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.6667, nucl 13, cyto 12,
cyto_plas 8.16667, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000595742 (
ENST00000492251
)
(DHR-2 domain containing protein.)
genome : 225,657,691 - 225,659,843 (2,153)
query : 1 - 405 (405/405)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000520618 (
ENST00000422684
)
(Conserved hypothetical protein.)
genome : 225,664,879 - 225,681,369 (16,491)
query : 1 - 1,140 (1,140/1,140)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000593422 (
ENST00000489831
)
(Conserved hypothetical protein.)
genome : 225,671,962 - 225,672,650 (689)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, mito 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0002889
HIT000049528
(
AK130257
)
(Conserved hypothetical protein.)
genome : 225,698,048 - 225,699,855 (1,808)
query : 1 - 1,808 (1,808/1,808)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002889)
HIX0215018
HIT000577020 (
ENST00000472652
)
(Conserved hypothetical protein.)
genome : 225,702,446 - 225,704,922 (2,477)
query : 1 - 355 (355/355)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, pero 5, nucl 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215018)
HIX0214494
HIT000000419
(
AB014594
)
Representative transcript
(Conserved hypothetical protein.)
genome : 225,725,297 - 225,907,330 (182,034)
query : 1 - 4,008 (4,008/4,008)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214494)
HIX0214494
HIT000595857 (
ENST00000492369
)
(Dedicator of cytokinesis family protein.)
genome : 225,725,297 - 225,907,159 (181,863)
query : 1 - 3,837 (3,837/3,837)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214494)
HIX0214494
HIT000642760 (
ENST00000543715
)
(Pleckstrin homology domain containing protein.)
genome : 225,739,417 - 225,750,971 (11,555)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214494)
HIX0214494
HIT000576218 (
ENST00000471810
)
(Dedicator of cytokinesis C/D, N-terminal domain containing protein.)
genome : 225,750,798 - 225,847,020 (96,223)
query : 1 - 563 (563/563)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17.5, nucl 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214494)
HIX0214494
HIT000578403 (
ENST00000474102
)
(Dedicator of cytokinesis family protein.)
genome : 225,758,059 - 225,811,622 (53,564)
query : 1 - 663 (663/663)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214494)
HIX0214494
HIT000533516 (
ENST00000435582
)
(Dedicator of cytokinesis family protein.)
genome : 225,758,265 - 225,907,162 (148,898)
query : 1 - 592 (592/592)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6.5, cyto_nucl 5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214494)
HIX0002886
HIT000202824 (
NM_006216
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,765 - 224,904,036 (64,272)
query : 1 - 2,259 (2,259/2,259)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000560396 (
NM_001136528
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,765 - 224,904,036 (64,272)
query : 1 - 2,256 (2,256/2,256)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000560398 (
NM_001136530
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,765 - 224,903,357 (63,593)
query : 1 - 2,186 (2,186/2,186)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 5.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000727478 (
NR_073116
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,765 - 224,896,195 (56,431)
query : 1 - 2,674 (2,674/2,674)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000052728
(
BC042628
)
Representative transcript
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,878 - 224,896,195 (56,318)
query : 1 - 2,558 (2,558/2,611)
10 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000107291 (
ENST00000258405
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,829 - 224,904,036 (64,208)
query : 1 - 2,195 (2,195/2,195)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000507337 (
ENST00000409304
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,829 - 224,904,005 (64,177)
query : 1 - 2,161 (2,161/2,161)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000384953
(
AK225823
)
(Glia-derived nexin isoform b precursor.)
genome : 224,839,878 - 224,904,005 (64,128)
query : 1 - 2,111 (2,111/2,131)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000037247
(
BC015663
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,878 - 224,903,993 (64,116)
query : 1 - 2,103 (2,103/2,120)
9 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF251153
Mus
sp. (Mouse) : AK047856
Danio
sp. (Zebrafish) : BC045498
Gallus
sp. (Chicken) : BX934893
Tetraodon
sp. (Tetraodon) : CR721772
Oryzias
sp. (Medaka) : ENSORLT00000011684
Pongo
sp. (Orangutan) : ENSPPYT00000015381
Rattus
sp. (Rat) : M17784
Takifugu
sp. (Fugu) : SINFRUT00000137160
Macaca
sp. (Macaque) : XM_001109093
Pan
sp. (Chimpanzee) : XM_001167085
Monodelphis
sp. (Opossum) : XM_001365456
Equus
sp. (Horse) : XM_001495952
Canis
sp. (Dog) : XM_859070
HIX0002886
HIT000507865 (
ENST00000409840
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,839,870 - 224,896,195 (56,326)
query : 1 - 2,569 (2,569/2,569)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000545214 (
ENST00000447280
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,840,399 - 224,903,521 (63,123)
query : 1 - 1,716 (1,716/1,716)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000490188
(
AK295564
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,840,399 - 224,903,325 (62,927)
query : 1 - 1,520 (1,520/1,520)
9 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 5.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000492212
(
AK297588
)
(Glia-derived nexin isoform b precursor.)
genome : 224,840,459 - 224,904,005 (63,547)
query : 1 - 1,367 (1,367/1,367)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.996;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 13, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000431365
(
AK312499
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,840,584 - 224,904,032 (63,449)
query : 19 - 1,454 (1,436/1,454)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995;0.996;
1.000;1.000)5'
coverage = 0.988
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0002886
HIT000194597
(
M17783
)
(Glia-derived nexin; GDN; Peptidase inhibitor 7; PI-7; Protease nexin 1; PN-1; Protease nexin I; Serpin E2; Precursor;)
genome : 224,840,587 - 224,866,617 (26,031)
query : 1 - 1,191 (1,191/1,191)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;0.996;
1.000)5'
coverage = 1.000
InterPro :
IPR000215 : Serpin family
IPR023795 : Serpin, conserved site
IPR023796 : Serpin domain
GO :
0005615 : Cellular Component : extracellular space
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3.5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002886)
HIX0215139
HIT000200405 (
NM_003590
)
(Cullin-3; CUL-3;)
genome : 225,334,867 - 225,450,114 (115,248)
query : 1 - 6,790 (6,790/6,790)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000723982 (
NM_001257197
)
(Cullin-3; CUL-3;)
genome : 225,334,867 - 225,450,114 (115,248)
query : 1 - 6,592 (6,592/6,592)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000109298 (
ENST00000264414
)
(Cullin-3; CUL-3;)
genome : 225,334,867 - 225,450,065 (115,199)
query : 1 - 6,741 (6,741/6,741)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000723983 (
NM_001257198
)
(Cullin-3; CUL-3;)
genome : 225,334,867 - 225,434,542 (99,676)
query : 1 - 6,473 (6,473/6,473)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 10, cyto_nucl 6.5, mito_pero 6.5,
cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000137581 (
ENST00000344951
)
(Cullin-3; CUL-3;)
genome : 225,334,869 - 225,450,110 (115,242)
query : 1 - 6,586 (6,586/6,586)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000000342
(
AB014517
)
Representative transcript
(Cullin-3; CUL-3;)
genome : 225,334,869 - 225,450,042 (115,174)
query : 1 - 6,716 (6,716/6,716)
16 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179010
Mus
sp. (Mouse) : AK129174
Danio
sp. (Zebrafish) : AY423034
Gallus
sp. (Chicken) : CR387127
Oryzias
sp. (Medaka) : ENSORLT00000014202
Oryzias
sp. (Medaka) : ENSORLT00000019884
Pongo
sp. (Orangutan) : ENSPPYT00000015383
Rattus
sp. (Rat) : ENSRNOT00000021528
Takifugu
sp. (Fugu) : SINFRUT00000179710
Pan
sp. (Chimpanzee) : XM_001167528
Monodelphis
sp. (Opossum) : XM_001365391
Equus
sp. (Horse) : XM_001493366
Bos
sp. (Cow) : XM_614056
Danio
sp. (Zebrafish) : XM_696079
Canis
sp. (Dog) : XM_855092
HIX0215139
HIT000334387
(
BC092409
)
(Cullin-3; CUL-3;)
genome : 225,338,622 - 225,450,053 (111,432)
query : 13 - 2,980 (2,968/3,043)
16 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.985)5'
coverage = 0.996
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000065253
(
AF062537
)
(Cullin-3 isoform 2.)
genome : 225,338,622 - 225,449,817 (111,196)
query : 1 - 2,736 (2,736/2,754)
16 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;0.975)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000065388
(
AF064087
)
(Cullin-3; CUL-3;)
genome : 225,338,622 - 225,449,809 (111,188)
query : 1 - 2,728 (2,728/2,746)
16 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.987)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000052221
(
BC039598
)
(Cullin-3; CUL-3;)
genome : 225,338,626 - 225,450,065 (111,440)
query : 1 - 2,976 (2,976/2,992)
16 exons
identity = 0.997
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.983)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000423948
(
AK291151
)
(Cullin-3; CUL-3;)
genome : 225,338,622 - 225,449,761 (111,140)
query : 4 - 2,685 (2,682/2,685)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000494268
(
AK299644
)
(Cullin-3 isoform 2.)
genome : 225,338,627 - 225,449,722 (111,096)
query : 1 - 2,442 (2,442/2,442)
15 exons
identity = 0.998
3'(0.996;1.000;0.995;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;0.983;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000427362
(
AK308496
)
(Cullin-3 isoform 2.)
genome : 225,338,645 - 225,434,542 (95,898)
query : 1 - 2,695 (2,695/2,705)
16 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
0.995;1.000)5'
coverage = 1.000
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 10, cyto_nucl 6.5, mito_pero 6.5,
cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000251937
(
AY337761
)
(Cullin-3 isoform 2.)
genome : 225,338,656 - 225,428,016 (89,361)
query : 1 - 3,147 (3,147/3,168)
16 exons
identity = 0.998
3'(1.000;0.993;0.995;1.000;1.000;0.992;0.991;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001373 : Cullin, N-terminal
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016157 : Cullin, conserved site
IPR016158 : Cullin homology
IPR016159 : Cullin repeat-like-containing domain
IPR019559 : Cullin protein, neddylation domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0031461 : Cellular Component : cullin-RING ubiquitin ligase complex
0031625 : Molecular Function : ubiquitin protein ligase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000507131 (
ENST00000409096
)
(Cullin-3; CUL-3;)
genome : 225,338,639 - 225,434,542 (95,904)
query : 1 - 2,701 (2,701/2,701)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 10, cyto_nucl 6.5, mito_pero 6.5,
cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215139
HIT000507802 (
ENST00000409777
)
(Cullin-3 isoform 2.)
genome : 225,338,656 - 225,428,016 (89,361)
query : 1 - 3,147 (3,147/3,147)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215139)
HIX0215193
HIT000317141 (
NM_014689
)
(Dedicator of cytokinesis protein 10; Zizimin-3;)
genome : 225,629,807 - 225,907,330 (277,524)
query : 1 - 7,431 (7,431/7,431)
56 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, plas 3, cyto 2, E.R. 2, extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215193)
HIX0215193
HIT000107285 (
ENST00000258390
)
(Dedicator of cytokinesis protein 10; Zizimin-3;)
genome : 225,629,807 - 225,907,159 (277,353)
query : 1 - 7,260 (7,260/7,260)
56 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, plas 3, cyto 2, E.R. 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215193)
HIX0215193
HIT000507622 (
ENST00000409592
)
(Dedicator of cytokinesis protein 10.)
genome : 225,629,807 - 225,811,782 (181,976)
query : 1 - 7,288 (7,288/7,288)
56 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.3333, cyto 8,
cyto_mito 5.83333, plas 4.5, pero 4, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215193)
HIX0215193
HIT000557602
(
EU236710
)
Representative transcript
(Dedicator of cytokinesis protein 10.)
genome : 225,630,377 - 225,811,779 (181,403)
query : 1 - 6,715 (6,715/6,715)
56 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
IPR010703 : Dedicator of cytokinesis C-terminal
IPR021816 : Dedicator of cytokinesis C/D, N-terminal
IPR026791 : Dedicator of cytokinesis
IPR027007 : DHR-1 domain
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.3333, cyto 8,
cyto_mito 5.83333, plas 4.5, pero 4, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215193)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB056820
Gallus
sp. (Chicken) : AJ851792
Mus
sp. (Mouse) : AK122347
Bos
sp. (Cow) : BC146044
Canis
sp. (Dog) : ENSCAFT00000016386
Oryzias
sp. (Medaka) : ENSORLT00000009216
Rattus
sp. (Rat) : ENSRNOT00000038528
Takifugu
sp. (Fugu) : SINFRUT00000135791
Danio
sp. (Zebrafish) : XM_001341012
Monodelphis
sp. (Opossum) : XM_001374045
Equus
sp. (Horse) : XM_001493461
Pan
sp. (Chimpanzee) : XM_516126
HIX0203972
eHIT000013991 ( ESTsASS_2_92 )
Representative transcript
(Non-protein coding transcript.)
genome : 224,450,463 - 224,452,513 (2,051)
query : 1 - 321 (321/321)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203972)
ESTs used for assembly :
BQ081913
AC068035.4
224200001-224207265 F +
NCBI
AC079120.6
224207266-224309812 F +
NCBI
AC013448.7
224309813-224439165 F +
NCBI
AC012512.7
224439166-224618625 F +
NCBI
AC093884.4
224618626-224719712 F +
NCBI
AC073641.3
224719713-224917221 F +
NCBI
AC019109.9
224917222-225080572 F +
NCBI
AC104802.4
225080573-225108680 F +
NCBI
AC008072.3
225108681-225314857 F -
NCBI
AC073052.5
225314858-225437927 F +
NCBI
AC092679.2
225437928-225526548 F +
NCBI
AC104830.4
225526549-225592257 F +
NCBI
AC011739.7
225592258-225762068 F +
NCBI
AC093806.2
225762069-225800000 F +
NCBI