bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0028847
HIT000211841 (
NM_080630
)
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,342,023 - 103,574,052 (232,030)
query : 1 - 6,943 (6,943/6,960)
65 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
cyto_nucl 2.5, E.R._golg 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000655650 (
NM_001190709
)
(Collagen alpha-1(XI) chain isoform E preproprotein.)
genome : 103,342,023 - 103,574,052 (232,030)
query : 1 - 7,174 (7,174/7,191)
66 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
cyto_nucl 2.5, E.R._golg 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000198786 (
NM_001854
)
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,342,023 - 103,574,052 (232,030)
query : 1 - 7,291 (7,291/7,291)
67 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
E.R._golg 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000211840 (
NM_080629
)
(Collagen alpha-1(XI) chain isoform B preproprotein.)
genome : 103,342,023 - 103,574,052 (232,030)
query : 1 - 7,327 (7,327/7,327)
67 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, E.R. 5.5, extr 5, cyto 4.5, E.R._golg 4.5,
cyto_nucl 3.5, golg 2.5, extr_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000308393 (
ENST00000353414
)
(Collagen alpha-1(XI) chain isoform E preproprotein.)
genome : 103,342,023 - 103,574,052 (232,030)
query : 1 - 7,174 (7,174/7,174)
66 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
cyto_nucl 2.5, E.R._golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000312107 (
ENST00000358392
)
(Collagen alpha-1(XI) chain isoform B preproprotein.)
genome : 103,342,023 - 103,574,052 (232,030)
query : 1 - 7,327 (7,327/7,327)
67 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, E.R. 5.5, extr 5, cyto 4.5, E.R._golg 4.5,
cyto_nucl 3.5, golg 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000351376 (
ENST00000370096
)
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,342,023 - 103,574,047 (232,025)
query : 1 - 7,286 (7,286/7,286)
67 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
E.R._golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000191251
(
J04177
)
Representative transcript
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,342,992 - 103,573,895 (230,904)
query : 1 - 6,157 (6,157/6,158)
67 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
IPR001791 : Laminin G domain
IPR008160 : Collagen triple helix repeat
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
E.R._golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK157734
Danio
sp. (Zebrafish) : BC133083
Canis
sp. (Dog) : ENSCAFT00000031806
Danio
sp. (Zebrafish) : ENSDART00000049589
Macaca
sp. (Macaque) : ENSMMUT00000005829
Oryzias
sp. (Medaka) : ENSORLT00000007123
Pongo
sp. (Orangutan) : ENSPPYT00000001324
Tetraodon
sp. (Tetraodon) : GSTENT00027702001
Tetraodon
sp. (Tetraodon) : GSTENT00035101001
Bos
sp. (Cow) : M82977
Gallus
sp. (Chicken) : M88593
Takifugu
sp. (Fugu) : SINFRUT00000180328
Rattus
sp. (Rat) : U20121
Pan
sp. (Chimpanzee) : XM_001140052
Monodelphis
sp. (Opossum) : XM_001372220
Equus
sp. (Horse) : XM_001918115
HIX0028847
HIT000387831
(
BC117697
)
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,343,507 - 103,574,035 (230,529)
query : 1 - 5,442 (5,442/5,450)
65 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
IPR001791 : Laminin G domain
IPR008160 : Collagen triple helix repeat
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
cyto_nucl 2.5, E.R._golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000612382 (
ENST00000512756
)
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,343,507 - 103,574,035 (230,529)
query : 1 - 5,442 (5,442/5,442)
65 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, E.R. 3, extr_plas 3, cyto 2.5,
cyto_nucl 2.5, E.R._golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000525173 (
ENST00000427239
)
(Collagen alpha-1(XI) chain isoform B preproprotein.)
genome : 103,474,029 - 103,573,734 (99,706)
query : 1 - 1,709 (1,709/1,709)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 5, cyto 5, cyto_nucl 5, E.R. 3.5,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0028847
HIT000545542 (
ENST00000447608
)
(Collagen alpha-1(XI) chain; Precursor;)
genome : 103,496,457 - 103,548,415 (51,959)
query : 1 - 776 (776/776)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11, cyto_nucl 10.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028847)
HIX0000824
HIT000005309
(
AK022035
)
Representative transcript
(Conserved hypothetical protein.)
genome : 103,537,051 - 103,539,080 (2,030)
query : 1 - 2,029 (2,029/2,029)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5.5, cyto_nucl 5.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000824)
HIX0160150
HIT000479873 (
ENST00000396543
)
(Conserved hypothetical protein.)
genome : 103,565,699 - 103,566,260 (562)
query : 1 - 562 (562/562)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160150)
HIX0159793
HIT000512857_01 (
ENST00000414923
)
(Hypothetical short protein.)
genome : 103,817,769 - 103,828,355 (10,587)
query : 1 - 418 (418/418)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159793)
HIX0159793
HIT000522889_01 (
ENST00000424955
)
(Hypothetical short protein.)
genome : 103,817,769 - 103,828,355 (10,587)
query : 1 - 418 (418/418)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159793)
HIX0159935
HIT000553705_01 (
ENST00000455771
)
(Hypothetical protein.)
genome : 103,820,969 - 103,835,986 (15,018)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159935)
HIX0159935
HIT000549639_01 (
ENST00000451705
)
(Hypothetical protein.)
genome : 103,821,644 - 103,835,986 (14,343)
query : 1 - 355 (355/355)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9, mito_nucl 9, mito 7, cyto 2, golg 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159935)
HIX0159794
HIT000512857_02 (
ENST00000414923
)
(Hypothetical short protein.)
genome : 103,957,501 - 103,968,087 (10,587)
query : 1 - 418 (418/418)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159794)
HIX0159794
HIT000522889_02 (
ENST00000424955
)
(Hypothetical short protein.)
genome : 103,957,501 - 103,968,087 (10,587)
query : 1 - 418 (418/418)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159794)
HIX0159927
HIT000542744 (
ENST00000444810
)
(Hypothetical protein.)
genome : 103,960,701 - 104,068,105 (107,405)
query : 1 - 527 (527/527)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159927)
HIX0159927
HIT000553705_02 (
ENST00000455771
)
(Hypothetical protein.)
genome : 103,960,701 - 103,975,718 (15,018)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159927)
HIX0159927
HIT000545256 (
ENST00000447322
)
(Conserved hypothetical protein.)
genome : 103,961,376 - 104,068,083 (106,708)
query : 1 - 470 (470/470)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9, mito_nucl 9, mito 7, cyto 2, golg 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159927)
HIX0159927
HIT000549639_02 (
ENST00000451705
)
(Hypothetical protein.)
genome : 103,961,376 - 103,975,718 (14,343)
query : 1 - 355 (355/355)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 9, mito_nucl 9, mito 7, cyto 2, golg 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159927)
HIX0160193
HIT000508151 (
ENST00000410137
)
(Hypothetical short protein.)
genome : 104,066,184 - 104,066,501 (318)
query : 1 - 318 (318/318)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160193)
HIX0213695
HIT000422641
(
AK289844
)
Representative transcript
(RNA recognition motif domain containing protein.)
genome : 104,068,313 - 104,095,965 (27,653)
query : 1 - 2,013 (2,013/2,013)
15 exons
identity = 0.999
5'(0.997;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000623883 (
ENST00000524631
)
(RNA recognition motif domain containing protein.)
genome : 104,068,313 - 104,095,965 (27,653)
query : 1 - 2,013 (2,013/2,013)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000630997 (
ENST00000531883
)
(RNA recognition motif domain containing protein.)
genome : 104,068,319 - 104,078,063 (9,745)
query : 1 - 686 (686/686)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, mito_nucl 14.8333, cyto_nucl 13.6667,
mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000626268 (
ENST00000527062
)
(Conserved hypothetical protein.)
genome : 104,068,379 - 104,084,097 (15,719)
query : 1 - 768 (768/768)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000026018
(
AL137730
)
(Conserved hypothetical protein.)
genome : 104,080,010 - 104,095,387 (15,378)
query : 1 - 3,646 (3,646/3,661)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000632908 (
ENST00000533834
)
(Conserved hypothetical protein.)
genome : 104,080,010 - 104,095,387 (15,378)
query : 1 - 3,645 (3,645/3,658)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000002490
(
AK000015
)
(Conserved hypothetical protein.)
genome : 104,080,050 - 104,087,691 (7,642)
query : 1 - 464 (464/478)
4 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000623893 (
ENST00000524641
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 104,083,983 - 104,089,657 (5,675)
query : 1 - 547 (547/547)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000624564 (
ENST00000525323
)
(RNA recognition motif domain containing protein.)
genome : 104,089,549 - 104,093,885 (4,337)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.3333, cyto_pero 12.3333,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0213695
HIT000631228 (
ENST00000532117
)
(Conserved hypothetical protein.)
genome : 104,094,346 - 104,096,336 (1,991)
query : 1 - 237 (237/237)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213695)
HIX0203710
HIT000533236 (
ENST00000435302
)
(Glycoside hydrolase, family 13 protein.)
genome : 104,104,379 - 104,114,851 (10,473)
query : 1 - 832 (832/832)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000551893 (
ENST00000453959
)
(Glycoside hydrolase, family 13 protein.)
genome : 104,107,653 - 104,114,822 (7,170)
query : 1 - 869 (869/869)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000039006
(
BC020861
)
Representative transcript
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,108,127 - 104,122,149 (14,023)
query : 1 - 1,699 (1,699/1,728)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000046920
(
AK127047
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,110,956 - 104,122,152 (11,197)
query : 1 - 3,677 (3,677/3,677)
11 exons
identity = 1.000
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000594922 (
ENST00000491397
)
(Glycoside hydrolase, family 13 protein.)
genome : 104,110,956 - 104,122,152 (11,197)
query : 1 - 4,716 (4,716/4,716)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, lyso 5, mito 4, pero 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000250742
(
AY129015
)
(Actin family protein.)
genome : 104,112,026 - 104,114,007 (1,982)
query : 1 - 1,984 (1,984/2,017)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR004000 : Actin family
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000562617 (
NR_024438
)
(Actin family protein.)
genome : 104,112,026 - 104,114,013 (1,988)
query : 1 - 1,988 (1,988/1,988)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, cyto_nucl 9.5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000523057 (
ENST00000425123
)
(Actin family protein.)
genome : 104,112,175 - 104,113,296 (1,122)
query : 1 - 1,122 (1,122/1,122)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, cyto_nucl 9.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000194963
(
M24895
)
(Glycoside hydrolase, family 13 protein.)
genome : 104,114,179 - 104,122,152 (7,974)
query : 1 - 1,612 (1,612/1,612)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000567783 (
ENST00000462971
)
(Glycoside hydrolase, catalytic domain containing protein.)
genome : 104,117,937 - 104,118,403 (467)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 10, extr 9, cyto 7, nucl 5,
E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000393341
(
DQ786288
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,118,061 - 104,153,096 (35,036)
query : 3 - 734 (732/749)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.997
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 6, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0203710
HIT000585783 (
ENST00000481821
)
(Alpha-amylase, C-terminal all beta domain containing protein.)
genome : 104,120,009 - 104,122,156 (2,148)
query : 1 - 683 (683/683)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, mito 5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203710)
HIX0159709
HIT000503243
(
BC146997
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,159,954 - 104,162,543 (2,590)
query : 1 - 990 (990/990)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000033019
(
BC007060
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,159,999 - 104,168,399 (8,401)
query : 1 - 1,631 (1,631/1,660)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, pero 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000197721 (
NM_000699
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,159,999 - 104,168,399 (8,401)
query : 1 - 1,631 (1,631/1,660)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, pero 5, mito_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000512237 (
ENST00000414303
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,159,999 - 104,168,402 (8,404)
query : 1 - 1,634 (1,634/1,634)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, pero 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000331243_03
(
AK223463
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,160,050 - 104,168,394 (8,345)
query : 12 - 1,586 (1,575/1,640)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.985;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.993
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 5, pero 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000195241_03
(
M28443
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,160,050 - 104,168,393 (8,344)
query : 1 - 1,574 (1,574/1,574)
10 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, pero 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000521612 (
ENST00000423678
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,160,068 - 104,163,290 (3,223)
query : 1 - 626 (626/626)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000536538_02 (
ENST00000438604
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,161,533 - 104,161,730 (198)
query : 1 - 198 (198/198)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, cyto 6, nucl 4.5,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000601009 (
ENST00000497748
)
(Pancreatic alpha-amylase; PA; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase; Precursor;)
genome : 104,164,184 - 104,168,227 (4,044)
query : 1 - 532 (532/532)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, cyto 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000597808_01 (
ENST00000494409
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,166,575 - 104,207,171 (40,597)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000601522_01 (
ENST00000498295
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,166,575 - 104,207,171 (40,597)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0214161
HIT000528593_01 (
ENST00000430659
)
(Glycoside hydrolase, family 13 protein.)
genome : 104,197,912 - 104,201,226 (3,315)
query : 1 - 1,363 (1,363/1,363)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214161)
HIX0159709
HIT000351360_04 (
ENST00000370080
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,138 - 104,207,176 (9,039)
query : 1 - 1,787 (1,787/1,787)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000316488_04 (
NM_001008221
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,141 - 104,207,173 (9,033)
query : 1 - 1,781 (1,781/1,781)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000425138_04
(
AK292341
)
Representative transcript
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,142 - 104,207,172 (9,031)
query : 1 - 1,779 (1,779/1,779)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC054681
Bos
sp. (Cow) : BC105233
Gallus
sp. (Chicken) : BX950423
Monodelphis
sp. (Opossum) : ENSMODT00000003616
Takifugu
sp. (Fugu) : SINFRUT00000182557
HIX0159709
HIT000126613_05 (
ENST00000330330
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,302 - 104,207,173 (8,872)
query : 1 - 1,862 (1,862/1,862)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000200813_04 (
NM_004038
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,302 - 104,207,173 (8,872)
query : 1 - 1,862 (1,862/1,862)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000316486_04 (
NM_001008219
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,303 - 104,207,172 (8,870)
query : 1 - 1,860 (1,860/1,860)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000316485_04 (
NM_001008218
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,325 - 104,207,172 (8,848)
query : 1 - 1,838 (1,838/1,838)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000260776_04
(
BC063129
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,377 - 104,207,173 (8,797)
query : 5 - 1,791 (1,787/1,820)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000351363_04 (
ENST00000370083
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,377 - 104,207,173 (8,797)
query : 1 - 1,787 (1,787/1,787)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000264260_04
(
BC070302
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,377 - 104,207,062 (8,686)
query : 1 - 1,676 (1,676/1,707)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 8, E.R. 6.5, extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000432141_04
(
AK313275
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,382 - 104,207,142 (8,761)
query : 1 - 1,751 (1,751/1,751)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000334421_04
(
BC092444
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,407 - 104,207,168 (8,762)
query : 2 - 1,753 (1,752/1,782)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000391036_04
(
BC132985
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,427 - 104,207,172 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000391038_04
(
BC132987
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,427 - 104,207,172 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000391048_04
(
BC132997
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,427 - 104,207,172 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000502862_01
(
BC144452
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,427 - 104,207,172 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000391046_04
(
BC132995
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,428 - 104,207,172 (8,745)
query : 1 - 1,735 (1,735/1,735)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000520483_01 (
ENST00000422549
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,640 - 104,199,612 (973)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000523344_01 (
ENST00000425410
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,640 - 104,199,612 (973)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000351359_04 (
ENST00000370079
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,889 - 104,207,174 (8,286)
query : 1 - 1,632 (1,632/1,632)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000263499_04
(
BC069347
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,953 - 104,207,142 (8,190)
query : 1 - 1,536 (1,536/1,536)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000263614_04
(
BC069463
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,198,953 - 104,207,142 (8,190)
query : 1 - 1,536 (1,536/1,536)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000566397_01 (
ENST00000461518
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,199,429 - 104,202,165 (2,737)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0159709
HIT000569425_01 (
ENST00000464691
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,199,429 - 104,202,165 (2,737)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159709)
HIX0160998
HIT000536538_01 (
ENST00000438604
)
(Glycoside hydrolase, catalytic domain containing protein.)
genome : 104,210,693 - 104,210,890 (198)
query : 1 - 198 (198/198)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, cyto 6, nucl 4.5,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160998)
HIX0159710
HIT000260776_05
(
BC063129
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,040 - 104,238,837 (8,798)
query : 5 - 1,791 (1,787/1,820)
11 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000334421_05
(
BC092444
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,045 - 104,238,807 (8,763)
query : 2 - 1,753 (1,752/1,782)
11 exons
identity = 0.999
3'(0.995;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000351360_05 (
ENST00000370080
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,037 - 104,239,076 (9,040)
query : 1 - 1,787 (1,787/1,787)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000351359_05 (
ENST00000370079
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,039 - 104,238,325 (8,287)
query : 1 - 1,632 (1,632/1,632)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000316488_05 (
NM_001008221
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,040 - 104,239,073 (9,034)
query : 1 - 1,781 (1,781/1,781)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000126613_06 (
ENST00000330330
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,040 - 104,238,912 (8,873)
query : 1 - 1,862 (1,862/1,862)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000200813_05 (
NM_004038
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,040 - 104,238,912 (8,873)
query : 1 - 1,862 (1,862/1,862)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000351363_05 (
ENST00000370083
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,040 - 104,238,837 (8,798)
query : 1 - 1,787 (1,787/1,787)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000425138_05
(
AK292341
)
Representative transcript
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,239,072 (9,032)
query : 1 - 1,779 (1,779/1,779)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133526
Pongo
sp. (Orangutan) : ENSPPYT00000001322
Rattus
sp. (Rat) : J00703
HIX0159710
HIT000316486_05 (
NM_001008219
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,911 (8,871)
query : 1 - 1,860 (1,860/1,860)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000316485_05 (
NM_001008218
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,889 (8,849)
query : 1 - 1,838 (1,838/1,838)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000391036_05
(
BC132985
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,787 (8,747)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000391038_05
(
BC132987
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,787 (8,747)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000391048_05
(
BC132997
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,787 (8,747)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000502862_02
(
BC144452
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,787 (8,747)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000391046_05
(
BC132995
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,041 - 104,238,786 (8,746)
query : 1 - 1,735 (1,735/1,735)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000597808_03 (
ENST00000494409
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,230,042 - 104,231,847 (1,806)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000601522_03 (
ENST00000498295
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,042 - 104,231,847 (1,806)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000432141_05
(
AK313275
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,071 - 104,238,832 (8,762)
query : 1 - 1,751 (1,751/1,751)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000263499_05
(
BC069347
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,071 - 104,238,261 (8,191)
query : 1 - 1,536 (1,536/1,536)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000263614_05
(
BC069463
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,071 - 104,238,261 (8,191)
query : 1 - 1,536 (1,536/1,536)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000264260_05
(
BC070302
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,230,151 - 104,238,837 (8,687)
query : 1 - 1,676 (1,676/1,707)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 8, E.R. 6.5, extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000566397_02 (
ENST00000461518
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,235,049 - 104,237,785 (2,737)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000569425_02 (
ENST00000464691
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,235,049 - 104,237,785 (2,737)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000544637 (
ENST00000446703
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,235,988 - 104,239,302 (3,315)
query : 1 - 1,363 (1,363/1,363)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000520483_02 (
ENST00000422549
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,237,602 - 104,238,574 (973)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0159710
HIT000523344_02 (
ENST00000425410
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,237,602 - 104,238,574 (973)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159710)
HIX0161052
HIT000537993 (
ENST00000440059
)
(Alpha amylase family protein.)
genome : 104,256,345 - 104,262,493 (6,149)
query : 1 - 1,023 (1,023/1,023)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.8333, cyto_plas 12.1667,
pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161052)
HIX0214162
HIT000528593_02 (
ENST00000430659
)
(Glycoside hydrolase, family 13 protein.)
genome : 104,292,050 - 104,295,365 (3,316)
query : 1 - 1,363 (1,363/1,363)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214162)
HIX0159711
HIT000351360_06 (
ENST00000370080
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,276 - 104,301,314 (9,039)
query : 1 - 1,787 (1,787/1,787)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000316488_06 (
NM_001008221
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,279 - 104,301,311 (9,033)
query : 1 - 1,781 (1,781/1,781)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000425138_06
(
AK292341
)
Representative transcript
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,280 - 104,301,310 (9,031)
query : 1 - 1,779 (1,779/1,779)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC105233
Pan
sp. (Chimpanzee) : XM_001142554
HIX0159711
HIT000126613_07 (
ENST00000330330
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,440 - 104,301,311 (8,872)
query : 1 - 1,862 (1,862/1,862)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000200813_06 (
NM_004038
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,440 - 104,301,311 (8,872)
query : 1 - 1,862 (1,862/1,862)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000316486_06 (
NM_001008219
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,441 - 104,301,310 (8,870)
query : 1 - 1,860 (1,860/1,860)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000316485_06 (
NM_001008218
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,463 - 104,301,310 (8,848)
query : 1 - 1,838 (1,838/1,838)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000260776_06
(
BC063129
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,515 - 104,301,311 (8,797)
query : 5 - 1,791 (1,787/1,820)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)3'
coverage = 0.997
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000351363_06 (
ENST00000370083
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,515 - 104,301,311 (8,797)
query : 1 - 1,787 (1,787/1,787)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000264260_06
(
BC070302
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,515 - 104,301,200 (8,686)
query : 1 - 1,676 (1,676/1,707)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 8, E.R. 6.5, extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000432141_06
(
AK313275
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,520 - 104,301,280 (8,761)
query : 1 - 1,751 (1,751/1,751)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000334421_06
(
BC092444
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,545 - 104,301,306 (8,762)
query : 2 - 1,753 (1,752/1,782)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;0.995)3'
coverage = 0.999
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000391036_06
(
BC132985
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,565 - 104,301,310 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000391038_06
(
BC132987
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,565 - 104,301,310 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000391048_06
(
BC132997
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,565 - 104,301,310 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000502862_03
(
BC144452
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,565 - 104,301,310 (8,746)
query : 1 - 1,736 (1,736/1,736)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000391046_06
(
BC132995
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,566 - 104,301,310 (8,745)
query : 1 - 1,735 (1,735/1,735)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000520483_03 (
ENST00000422549
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,778 - 104,293,751 (974)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000523344_03 (
ENST00000425410
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,292,778 - 104,293,751 (974)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000351359_06 (
ENST00000370079
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,293,028 - 104,301,312 (8,285)
query : 1 - 1,632 (1,632/1,632)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000263499_06
(
BC069347
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,293,092 - 104,301,280 (8,189)
query : 1 - 1,536 (1,536/1,536)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000263614_06
(
BC069463
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,293,092 - 104,301,280 (8,189)
query : 1 - 1,536 (1,536/1,536)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000566397_03 (
ENST00000461518
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,293,568 - 104,296,304 (2,737)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000569425_03 (
ENST00000464691
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,293,568 - 104,296,304 (2,737)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000597808_04 (
ENST00000494409
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,299,504 - 104,301,309 (1,806)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0159711
HIT000601522_04 (
ENST00000498295
)
(Alpha-amylase 1; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 1; Salivary alpha-amylase; Precursor;)
genome : 104,299,504 - 104,301,309 (1,806)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159711)
HIX0161084
HIT000539017 (
ENST00000441083
)
(Conserved hypothetical protein.)
genome : 104,469,189 - 104,470,428 (1,240)
query : 1 - 1,240 (1,240/1,240)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161084)
HIX0028710
HIT000483898 (
ENST00000401022
)
(THAP domain-containing protein 3 isoform 2.)
genome : 104,615,632 - 104,616,159 (528)
query : 1 - 528 (528/528)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028710)
HIX0028710
HIT000036583
(
BC014218
)
Representative transcript
(THAP domain-containing protein 3 isoform 2.)
genome : 104,615,645 - 104,619,692 (4,048)
query : 1 - 1,208 (1,208/1,225)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028710)
HIX0028710
HIT000516296 (
ENST00000418362
)
(THAP domain-containing protein 3 isoform 2.)
genome : 104,615,645 - 104,619,692 (4,048)
query : 1 - 1,208 (1,208/1,225)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028710)
HIX0028710
HIT000659147 (
NR_033990
)
(THAP domain-containing protein 3 isoform 2.)
genome : 104,615,645 - 104,619,692 (4,048)
query : 1 - 1,208 (1,208/1,224)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028710)
HIX0160819
HIT000530501 (
ENST00000432567
)
(Ferritin family protein.)
genome : 104,695,928 - 104,696,452 (525)
query : 1 - 525 (525/525)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, cyto 9.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160819)
HIX0021182
HIT000632185 (
ENST00000533099
)
(RNA-binding protein 40; RNA-binding motif protein 40; RNA-binding region-containing protein 3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K;)
genome : 104,068,321 - 104,097,734 (29,414)
query : 1 - 3,641 (3,641/3,641)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000001554
(
AB058742
)
Representative transcript
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,068,341 - 104,122,147 (53,807)
query : 1 - 5,385 (5,385/5,385)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171684
Danio
sp. (Zebrafish) : BC062867
Monodelphis
sp. (Opossum) : ENSMODT00000003616
Pan
sp. (Chimpanzee) : ENSPTRT00000048528
Canis
sp. (Dog) : XM_843196
HIX0021182
HIT000317336 (
NM_017619
)
(RNA-binding protein 40; RNA-binding motif protein 40; RNA-binding region-containing protein 3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K;)
genome : 104,068,578 - 104,097,858 (29,281)
query : 1 - 1,884 (1,884/1,901)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000521789 (
ENST00000423855
)
(RNA-binding protein 40; RNA-binding motif protein 40; RNA-binding region-containing protein 3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K;)
genome : 104,068,593 - 104,097,861 (29,269)
query : 1 - 1,872 (1,872/1,872)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000250700
(
AY099329
)
(RNA-binding protein 40; RNA-binding motif protein 40; RNA-binding region-containing protein 3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K;)
genome : 104,068,594 - 104,097,858 (29,265)
query : 2 - 1,869 (1,868/1,870)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000014406
(
AK057799
)
(RNA-binding protein 40; RNA-binding motif protein 40; RNA-binding region-containing protein 3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K;)
genome : 104,068,599 - 104,097,854 (29,256)
query : 1 - 2,210 (2,210/2,210)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000035050
(
BC010697
)
(RNA-binding protein 40; RNA-binding motif protein 40; RNA-binding region-containing protein 3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K;)
genome : 104,068,602 - 104,097,858 (29,257)
query : 1 - 1,860 (1,860/1,877)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000027203
(
AL832291
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,078,757 - 104,122,156 (43,400)
query : 1 - 3,265 (3,265/3,286)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000020460
(
AK095605
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,096,437 - 104,122,152 (25,716)
query : 1 - 2,789 (2,789/2,789)
10 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, lyso 5, mito 4, pero 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000581793 (
ENST00000477657
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,096,437 - 104,122,152 (25,716)
query : 1 - 2,788 (2,788/2,788)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, lyso 5, mito 4, pero 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000208137 (
NM_020978
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,097,322 - 104,122,148 (24,827)
query : 1 - 2,178 (2,178/2,215)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000314621 (
ENST00000361355
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,097,322 - 104,122,151 (24,830)
query : 1 - 2,181 (2,181/2,181)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
HIX0021182
HIT000035191
(
BC011179
)
(Alpha-amylase 2B; EC=3.2.1.1; 1,4-alpha-D-glucan glucanohydrolase 2B; Carcinoid alpha-amylase; Precursor;)
genome : 104,097,574 - 104,122,148 (24,575)
query : 1 - 1,926 (1,926/1,963)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006046 : Alpha amylase
IPR006047 : Glycosyl hydrolase, family 13, catalytic domain
IPR006048 : Alpha-amylase, C-terminal all beta
IPR006589 : Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780 : Glycosyl hydrolase, family 13, all-beta
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015902 : Glycoside hydrolase, family 13
IPR017853 : Glycoside hydrolase superfamily
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0043169 : Molecular Function : cation binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, mito 5, lyso 3, E.R._mito 3,
cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021182)
AC093150.4
103500001-103650608 F +
NCBI
AL590082.9
103650609-103765640 F +
NCBI
BX649201.1
103765641-103863906 F +
NCBI
50000
103863907-103913906 N
AC095032.3
103913907-104071250 F +
NCBI
BX322653.2
104071251-104094315 F +
NCBI
AC105272.2
104094316-104211026 F +
NCBI
AL513482.13
104211027-104304052 F +
NCBI
AC113173.2
104304053-104452002 F -
NCBI
AL136455.6
104452003-104587743 F -
NCBI
AL162429.12
104587744-104600541 F +
NCBI
AC092506.3
104600542-104765610 F -
NCBI
AC098652.2
104765611-104922003 F +
NCBI
BX284698.6
104922004-105004879 F +
NCBI
AL691483.10
105004880-105093521 F +
NCBI
AL691486.10
105093522-105100000 F +
NCBI