bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0203832
HIT000615953 (
ENST00000516550
)
(Non-protein coding transcript.)
genome : 165,041,710 - 165,041,781 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203832)
HIX0023561
HIT000215448 (
NM_177398
)
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,171,104 - 165,325,952 (154,849)
query : 1 - 3,545 (3,545/3,555)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000655102 (
NM_001174069
)
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,171,104 - 165,325,478 (154,375)
query : 1 - 3,356 (3,356/3,366)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000134940 (
ENST00000342310
)
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,171,104 - 165,325,952 (154,849)
query : 1 - 3,545 (3,545/3,545)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000047597
(
AK127724
)
Representative transcript
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,171,105 - 165,325,952 (154,848)
query : 1 - 3,543 (3,543/3,543)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK044944
Bos
sp. (Cow) : ENSBTAT00000015947
Equus
sp. (Horse) : ENSECAT00000009503
Gallus
sp. (Chicken) : ENSGALT00000005411
Oryzias
sp. (Medaka) : ENSORLT00000008272
Rattus
sp. (Rat) : ENSRNOT00000006163
Danio
sp. (Zebrafish) : NM_001025498
Takifugu
sp. (Fugu) : SINFRUT00000130026
Takifugu
sp. (Fugu) : SINFRUT00000165549
Macaca
sp. (Macaque) : XM_001084612
Pan
sp. (Chimpanzee) : XM_001174539
Monodelphis
sp. (Opossum) : XM_001363575
Canis
sp. (Dog) : XM_846259
HIX0023561
HIT000042673
(
AK122800
)
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,171,110 - 165,325,478 (154,369)
query : 1 - 3,350 (3,350/3,350)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;0.994)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000113970 (
ENST00000294816
)
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,171,110 - 165,325,478 (154,369)
query : 1 - 3,350 (3,350/3,350)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000262244
(
BC066353
)
(LIM homeobox transcription factor 1-alpha.)
genome : 165,172,647 - 165,182,517 (9,871)
query : 1 - 1,253 (1,253/1,268)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000593046 (
ENST00000489443
)
(LIM homeobox transcription factor 1-alpha.)
genome : 165,172,645 - 165,182,517 (9,873)
query : 1 - 1,255 (1,255/1,255)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000388062
(
BC119743
)
(LIM homeobox transcription factor 1-alpha.)
genome : 165,173,002 - 165,182,240 (9,239)
query : 1 - 640 (640/641)
5 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 12, mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000388063
(
BC119744
)
(LIM homeobox transcription factor 1-alpha.)
genome : 165,173,002 - 165,182,240 (9,239)
query : 1 - 640 (640/641)
5 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 12, mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0023561
HIT000349173 (
ENST00000367893
)
(LIM homeobox transcription factor 1-alpha; LIM/homeobox protein 1.1; LMX-1.1; LIM/homeobox protein LMX1A;)
genome : 165,173,111 - 165,324,983 (151,873)
query : 1 - 1,342 (1,342/1,342)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023561)
HIX0203725
HIT000555040 (
ENST00000457106
)
(Conserved hypothetical protein.)
genome : 165,179,864 - 165,182,327 (2,464)
query : 1 - 692 (692/692)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 6, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203725)
HIX0159862
HIT000539707 (
ENST00000441773
)
(Hypothetical short protein.)
genome : 165,185,217 - 165,188,341 (3,125)
query : 1 - 674 (674/674)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159862)
HIX0159862
HIT000524112 (
ENST00000426178
)
(Hypothetical short protein.)
genome : 165,187,652 - 165,188,284 (633)
query : 1 - 537 (537/537)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, extr 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159862)
HIX0001278
HIT000203480 (
NM_006917
)
(Steroid hormone receptor family protein.)
genome : 165,370,159 - 165,414,592 (44,434)
query : 1 - 2,195 (2,195/2,205)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000723736 (
NM_001256570
)
(Steroid hormone receptor family protein.)
genome : 165,370,159 - 165,414,592 (44,434)
query : 1 - 2,253 (2,253/2,263)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000723737 (
NM_001256571
)
(Steroid hormone receptor family protein.)
genome : 165,370,159 - 165,394,221 (24,063)
query : 1 - 1,670 (1,670/1,680)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000313312 (
ENST00000359842
)
(Steroid hormone receptor family protein.)
genome : 165,370,159 - 165,414,433 (44,275)
query : 1 - 2,036 (2,036/2,036)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000219592
(
U38480
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,355 - 165,414,157 (43,803)
query : 1 - 1,564 (1,564/1,594)
10 exons
identity = 0.999
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 0.981
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000035630
(
BC012063
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,355 - 165,414,318 (43,964)
query : 1 - 1,725 (1,725/1,742)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0159973
HIT000045370
(
AK125497
)
Representative transcript
(Conserved hypothetical protein.)
genome : 165,370,351 - 165,373,949 (3,599)
query : 1 - 2,770 (2,770/2,770)
2 exons
identity = 0.997
5'(0.996;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 11.5, cyto 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159973)
HIX0001278
HIT000563816
(
AB593015
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,354 - 165,414,236 (43,883)
query : 1 - 1,644 (1,644/1,644)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000563817
(
AB593016
)
Representative transcript
(Retinoic acid receptor RXR-gamma isoform c.)
genome : 165,370,356 - 165,414,500 (44,145)
query : 1 - 1,964 (1,964/1,964)
11 exons
identity = 0.998
3'(0.993;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000431788
(
AK312922
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,500 - 165,414,519 (44,020)
query : 1 - 1,784 (1,784/1,784)
10 exons
identity = 0.997
3'(1.000;1.000;0.989;1.000;1.000;1.000;0.994;
1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000267555
(
CR456705
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,504 - 165,414,130 (43,627)
query : 1 - 1,388 (1,388/1,392)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000486617
(
AB307706
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,500 - 165,414,130 (43,631)
query : 1 - 1,392 (1,392/1,392)
10 exons
identity = 0.997
3'(1.000;0.991;0.989;1.000;1.000;0.994;1.000;
0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000653598
(
HQ692845
)
(Retinoic acid receptor RXR-gamma isoform a.)
genome : 165,370,500 - 165,414,130 (43,631)
query : 1 - 1,392 (1,392/1,392)
10 exons
identity = 0.999
3'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
IPR021780 : Nuclear/hormone receptor activator site AF-1
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000575035 (
ENST00000470566
)
(Steroid hormone receptor family protein.)
genome : 165,379,987 - 165,394,209 (14,223)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000658982 (
NR_033824
)
(Hypothetical short protein.)
genome : 165,406,165 - 165,414,592 (8,428)
query : 1 - 785 (785/803)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.33333, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0001278
HIT000570450 (
ENST00000465764
)
(Hypothetical short protein.)
genome : 165,406,165 - 165,414,409 (8,245)
query : 1 - 602 (602/602)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.33333, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001278)
HIX0022306
HIT000090322
(
BC020945
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,446,078 - 165,551,392 (105,315)
query : 1 - 1,719 (1,719/1,734)
6 exons
identity = 0.995
3'(0.996;0.985;0.995;1.000;0.986;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000514358 (
ENST00000416424
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,446,078 - 165,551,392 (105,315)
query : 1 - 1,717 (1,717/1,717)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000017999
(
AK093132
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,446,079 - 165,551,341 (105,263)
query : 1 - 1,752 (1,752/1,752)
7 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 9, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000519207 (
ENST00000421273
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,446,079 - 165,551,341 (105,263)
query : 1 - 1,752 (1,752/1,752)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 9, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000562931 (
NR_026744
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,446,079 - 165,551,341 (105,263)
query : 1 - 1,752 (1,752/1,752)
7 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 9, nucl 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0023723
HIT000045704
(
AK125831
)
Representative transcript
(Conserved hypothetical protein.)
genome : 165,454,920 - 165,458,655 (3,736)
query : 1 - 3,738 (3,738/3,738)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 5, nucl 4.5, cyto_nucl 3.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023723)
HIX0022306
HIT000092166
(
BC030596
)
Representative transcript
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,458,813 - 165,551,365 (92,553)
query : 1 - 2,399 (2,399/2,412)
8 exons
identity = 0.995
3'(1.000;0.990;0.995;1.000;0.929;0.986;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13.5, cyto_nucl 9, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000536209 (
ENST00000438275
)
(40S ribosomal protein S2; 40S ribosomal protein S4; Protein LLRep3;)
genome : 165,458,812 - 165,551,365 (92,554)
query : 1 - 2,400 (2,400/2,400)
8 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.929;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000093137
(
BC033551
)
(Hypothetical short protein.)
genome : 165,462,198 - 165,508,849 (46,652)
query : 1 - 973 (973/988)
6 exons
identity = 0.997
3'(1.000;0.995;1.000;0.995;1.000;0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000550217 (
ENST00000452283
)
(Hypothetical short protein.)
genome : 165,462,198 - 165,508,849 (46,652)
query : 1 - 973 (973/973)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000516859 (
ENST00000418925
)
(Hypothetical short protein.)
genome : 165,462,310 - 165,470,907 (8,598)
query : 1 - 371 (371/371)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0161302
HIT000546898 (
ENST00000448964
)
(Conserved hypothetical protein.)
genome : 165,466,961 - 165,467,585 (625)
query : 1 - 625 (625/625)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161302)
HIX0022306
HIT000512934 (
ENST00000415000
)
(Hypothetical short protein.)
genome : 165,468,249 - 165,496,895 (28,647)
query : 1 - 368 (368/368)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0022306
HIT000552185 (
ENST00000454251
)
(Hypothetical short protein.)
genome : 165,494,402 - 165,498,121 (3,720)
query : 1 - 287 (287/287)
3 exons
identity = 0.966
3'(1.000;1.000;0.913)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022306)
HIX0001279
HIT000023507
(
AK098677
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,244 - 165,533,198 (19,955)
query : 3 - 1,371 (1,369/1,371)
2 exons
identity = 0.997
5'(1.000;0.991)3'
coverage = 0.999
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0001279
HIT000113971 (
ENST00000294818
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,244 - 165,533,198 (19,955)
query : 1 - 1,369 (1,369/1,369)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0001279
HIT000316071 (
NM_001005214
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,478 - 165,533,185 (19,708)
query : 1 - 1,122 (1,122/1,125)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0001279
HIT000435898
(
BC150575
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,478 - 165,533,128 (19,651)
query : 1 - 1,065 (1,065/1,066)
2 exons
identity = 0.999
5'(1.000;0.997)3'
coverage = 0.999
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0001279
HIT000435899
(
BC150576
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,478 - 165,533,128 (19,651)
query : 1 - 1,065 (1,065/1,066)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0001279
HIT000389348
(
BC127721
)
Representative transcript
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,478 - 165,533,128 (19,651)
query : 1 - 1,065 (1,065/1,065)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC087947
Rattus
sp. (Rat) : BC126099
Canis
sp. (Dog) : ENSCAFT00000021186
Equus
sp. (Horse) : ENSECAT00000025122
Oryzias
sp. (Medaka) : ENSORLT00000012753
Oryzias
sp. (Medaka) : ENSORLT00000018390
Pongo
sp. (Orangutan) : ENSPPYT00000000694
Takifugu
sp. (Fugu) : SINFRUT00000129037
Macaca
sp. (Macaque) : XM_001085517
Gallus
sp. (Chicken) : XM_001234093
Danio
sp. (Zebrafish) : XM_001333454
Monodelphis
sp. (Opossum) : XM_001370429
Pan
sp. (Chimpanzee) : XM_524946
Bos
sp. (Cow) : XM_616645
HIX0001279
HIT000391032
(
BC132981
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,506 - 165,533,127 (19,622)
query : 1 - 1,036 (1,036/1,036)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0001279
HIT000391034
(
BC132983
)
(Leucine-rich repeat-containing protein 52; BK channel auxiliary gamma subunit LRRC52; Precursor;)
genome : 165,513,506 - 165,533,127 (19,622)
query : 1 - 1,036 (1,036/1,036)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001279)
HIX0161138
HIT000540943 (
ENST00000443009
)
(Ribosomal protein S5, C-terminal domain containing protein.)
genome : 165,550,850 - 165,551,713 (864)
query : 1 - 864 (864/864)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_mito 11.5, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161138)
HIX0161403
HIT000550552 (
ENST00000452618
)
(Hypothetical short protein.)
genome : 165,567,700 - 165,592,568 (24,869)
query : 1 - 492 (492/492)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161403)
HIX0001280
HIT000349169 (
ENST00000367889
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,098 - 165,624,857 (24,760)
query : 1 - 1,015 (1,015/1,015)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000201273 (
NM_004528
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,110 - 165,625,371 (25,262)
query : 1 - 1,517 (1,517/1,528)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000349168 (
ENST00000367888
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,450 - 165,631,033 (30,584)
query : 1 - 778 (778/778)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R._mito 6, mito 5.5, E.R. 5.5, pero 3,
plas 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000032559
(
BC005964
)
Representative transcript
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,461 - 165,624,854 (24,394)
query : 1 - 649 (649/677)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.986;0.996)3'
coverage = 1.000
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000566200 (
ENST00000461308
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 165,600,463 - 165,620,011 (19,549)
query : 1 - 1,002 (1,002/1,002)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000342127
(
DQ185045
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 165,600,473 - 165,619,192 (18,720)
query : 1 - 173 (173/173)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14.5, mito 9, extr_plas 9, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000565553 (
ENST00000460632
)
(Hypothetical short protein.)
genome : 165,600,474 - 165,606,386 (5,913)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, cyto_nucl 9.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000598810 (
ENST00000495447
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,476 - 165,624,854 (24,379)
query : 1 - 720 (720/720)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000349165 (
ENST00000367885
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,477 - 165,624,857 (24,381)
query : 1 - 680 (680/680)
7 exons
identity = 0.994
5'(0.983;0.927;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.5, nucl 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000504889 (
ENST00000404549
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,477 - 165,624,857 (24,381)
query : 1 - 678 (678/678)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.5, nucl 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000062861
(
AF026977
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,504 - 165,624,857 (24,354)
query : 16 - 624 (609/649)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 0.938
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000349164 (
ENST00000367884
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,492 - 165,624,857 (24,366)
query : 1 - 717 (717/717)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000430969
(
AK312103
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,494 - 165,624,741 (24,248)
query : 1 - 503 (503/503)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000592325 (
ENST00000488688
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,600,495 - 165,620,831 (20,337)
query : 1 - 741 (741/741)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, E.R. 5, E.R._mito 5, cyto 4, pero 4,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000349163 (
ENST00000367883
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,601,300 - 165,624,857 (23,558)
query : 1 - 706 (706/706)
7 exons
identity = 0.996
5'(0.976;0.974;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.5, nucl 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000349166 (
ENST00000367886
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,601,477 - 165,624,853 (23,377)
query : 1 - 613 (613/613)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.5, nucl 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0200109
HIT000002548
(
AK000073
)
Representative transcript
(Conserved hypothetical protein.)
genome : 165,614,898 - 165,617,896 (2,999)
query : 1 - 2,444 (2,444/2,459)
2 exons
identity = 0.999
5'(0.999;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8, cyto_nucl 6.5, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200109)
HIX0200109
HIT000566626 (
ENST00000461759
)
(Conserved hypothetical protein.)
genome : 165,614,898 - 165,617,896 (2,999)
query : 1 - 2,445 (2,445/2,456)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 4.16667, cyto_pero 4.16667, nucl 3,
cyto 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200109)
HIX0001280
HIT000019326
(
AK094471
)
(Conserved hypothetical protein.)
genome : 165,618,029 - 165,621,129 (3,101)
query : 1 - 3,103 (3,103/3,103)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000330792
(
AK223012
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,619,075 - 165,624,854 (5,780)
query : 19 - 600 (582/663)
5 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000)3'
coverage = 0.970
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, plas 4, cyto 3.5, mito 3.5,
pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000029687
(
BC000505
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,619,075 - 165,624,854 (5,780)
query : 18 - 599 (582/616)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.972
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000581597 (
ENST00000477450
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,619,075 - 165,623,038 (3,964)
query : 1 - 364 (364/364)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, extr 6.5, cyto_mito 6.5, extr_plas 5.5,
pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000031375
(
BC003034
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,619,076 - 165,624,854 (5,779)
query : 1 - 581 (581/598)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000267268
(
CR450359
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,619,085 - 165,624,738 (5,654)
query : 1 - 456 (456/456)
5 exons
identity = 0.998
5'(1.000;0.986;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, E.R. 5.5, E.R._mito 5.16667,
mito_pero 4.66667, cyto_pero 4.16667, cyto 3.5, mito 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0001280
HIT000597482 (
ENST00000494074
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 165,623,070 - 165,624,857 (1,788)
query : 1 - 772 (772/772)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001280)
HIX0199965
HIT000219373
(
U34252
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,453 - 165,668,100 (36,648)
query : 1 - 2,688 (2,688/2,712)
11 exons
identity = 0.990
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.963)5'
coverage = 0.991
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 4, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000263988
(
BC070030
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,449 - 165,667,829 (36,381)
query : 1 - 2,429 (2,429/2,445)
11 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.995;0.993;1.000;
1.000;0.992;1.000;0.995)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000197718 (
NM_000696
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,631,449 - 165,667,900 (36,452)
query : 1 - 2,500 (2,500/2,500)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000309018 (
ENST00000354775
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,631,453 - 165,668,100 (36,648)
query : 1 - 2,696 (2,696/2,696)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.47
KEGG pathway :
00310 : Lysine degradation (49)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000035248
(
BC011410
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,810 - 165,667,778 (35,969)
query : 1 - 2,016 (2,016/2,031)
11 exons
identity = 0.999
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, mito 6, extr 4, pero 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000220138
(
U50203
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,795 - 165,667,639 (35,845)
query : 1 - 1,892 (1,892/1,892)
11 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cysk 12, cyto_nucl 9.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000488144
(
AK293520
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,820 - 165,667,832 (36,013)
query : 3 - 2,033 (2,031/2,033)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;0.995)5'
coverage = 0.999
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000496807
(
AK302183
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,820 - 165,667,603 (35,784)
query : 1 - 1,960 (1,960/1,960)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;0.992;1.000;0.991)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000503364
(
BC151140
)
Representative transcript
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,905 - 165,667,888 (35,984)
query : 1 - 2,032 (2,032/2,032)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000503365
(
BC151141
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,905 - 165,667,888 (35,984)
query : 1 - 2,032 (2,032/2,032)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000496391
(
AK301767
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,631,973 - 165,667,795 (35,823)
query : 1 - 1,841 (1,841/1,841)
11 exons
identity = 0.997
3'(1.000;1.000;0.993;1.000;0.995;1.000;0.995;
1.000;0.992;1.000;0.993)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000568398 (
ENST00000463610
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,632,012 - 165,634,443 (2,432)
query : 1 - 559 (559/559)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000323527
(
X75425
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,632,041 - 165,664,635 (32,595)
query : 13 - 1,633 (1,621/1,635)
10 exons
identity = 0.993
3'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
0.978;0.969;1.000)5'
coverage = 0.991
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000496815
(
AK302191
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,632,048 - 165,667,545 (35,498)
query : 1 - 1,674 (1,674/1,674)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000637193 (
ENST00000538148
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,632,048 - 165,667,545 (35,498)
query : 1 - 1,674 (1,674/1,674)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000431617
(
AK312751
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,632,287 - 165,667,829 (35,543)
query : 1 - 1,591 (1,591/1,591)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000072416
(
AF172093
)
(4-trimethylaminobutyraldehyde dehydrogenase; TMABADH; EC=1.2.1.47; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3; Gamma-aminobutyraldehyde dehydrogenase; EC=1.2.1.19; R-aminobutyraldehyde dehydrogenase;)
genome : 165,632,287 - 165,667,723 (35,437)
query : 1 - 1,485 (1,485/1,485)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
,
EC 1.2.1.19
,
EC 1.2.1.47
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, mito 6, extr 4, pero 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000594960 (
ENST00000491436
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,637,911 - 165,649,872 (11,962)
query : 1 - 819 (819/819)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000497278
(
AK302654
)
(Aldehyde dehydrogenase family 9 member A1; EC=1.2.1.3;)
genome : 165,638,008 - 165,667,823 (29,816)
query : 1 - 1,518 (1,518/1,518)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.2.1.3
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00040 : Pentose and glucuronate interconversions (57)
00053 : Ascorbate and aldarate metabolism (38)
00071 : Fatty acid metabolism (28)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00330 : Arginine and proline metabolism (98)
00340 : Histidine metabolism (33)
00380 : Tryptophan metabolism (54)
00410 : beta-Alanine metabolism (34)
00561 : Glycerolipid metabolism (35)
00620 : Pyruvate metabolism (62)
00625 : Chloroalkane and chloroalkene degradation (15)
00640 : Propanoate metabolism (45)
00903 : Limonene and pinene degradation (16)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR015590 : Aldehyde dehydrogenase domain
IPR016160 : Aldehyde dehydrogenase, cysteine active site
IPR016161 : Aldehyde/histidinol dehydrogenase
IPR016162 : Aldehyde dehydrogenase N-terminal domain
IPR016163 : Aldehyde dehydrogenase, C-terminal
IPR029510 : Aldehyde dehydrogenase, glutamic acid active site
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0016620 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cysk 11, cyto_nucl 9.83333,
cyto_plas 8.16667, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0161261
HIT000545479 (
ENST00000447545
)
(Ribosomal protein S15 family protein.)
genome : 165,640,493 - 165,640,962 (470)
query : 1 - 470 (470/470)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11.5, cyto_nucl 8, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161261)
HIX0160967
HIT000535643 (
ENST00000437709
)
(Ribosomal protein L21e family protein.)
genome : 165,645,547 - 165,646,018 (472)
query : 1 - 472 (472/472)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160967)
HIX0199965
HIT000566538 (
ENST00000461664
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,649,724 - 165,667,777 (18,054)
query : 1 - 899 (899/899)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cysk 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0199965
HIT000575885 (
ENST00000471457
)
(Aldehyde dehydrogenase domain containing protein.)
genome : 165,652,062 - 165,667,750 (15,689)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, mito_pero 9.5, extr 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199965)
HIX0001282
HIT000035665
(
BC012108
)
Representative transcript
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 165,667,987 - 165,679,198 (11,212)
query : 1 - 1,209 (1,209/1,227)
4 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018431 : Carbonic anhydrase, CA14
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 7.5, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001282)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC107639
HIX0001282
HIT000483865 (
ENST00000400982
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 165,667,987 - 165,679,205 (11,219)
query : 1 - 1,216 (1,216/1,216)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 10.5, extr 7, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001282)
HIX0001282
HIT000659705 (
NR_036683
)
(Carbonic anhydrase 14; EC=4.2.1.1; Carbonate dehydratase XIV; Carbonic anhydrase XIV; CA-XIV; Precursor;)
genome : 165,667,987 - 165,679,205 (11,219)
query : 1 - 1,216 (1,216/1,216)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 10.5, extr 7, cyto 6, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001282)
HIX0001282
HIT000551696 (
ENST00000453762
)
(Conserved hypothetical protein.)
genome : 165,677,520 - 165,678,747 (1,228)
query : 1 - 989 (989/989)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_pero 3.33333, extr 3, pero 3,
cyto_nucl 2.66667, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001282)
HIX0022700
HIT000207554 (
NM_019026
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,693,529 - 165,738,159 (44,631)
query : 1 - 4,469 (4,469/4,478)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, cyto_mito 10, pero 4, plas 3, nucl 3,
cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000723529 (
NM_001256164
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,693,529 - 165,738,159 (44,631)
query : 1 - 4,367 (4,367/4,376)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000723530 (
NM_001256165
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,693,529 - 165,738,159 (44,631)
query : 1 - 4,669 (4,669/4,678)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000726431 (
NR_045818
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,693,529 - 165,738,159 (44,631)
query : 1 - 4,392 (4,392/4,401)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 6, cyto_nucl 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000349161 (
ENST00000367881
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,696,032 - 165,738,417 (42,386)
query : 1 - 2,224 (2,224/2,224)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, cyto_mito 10, pero 4, plas 3, nucl 3,
cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000475623 (
ENST00000392129
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,696,032 - 165,738,139 (42,108)
query : 1 - 1,946 (1,946/1,946)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000257651
(
AY763589
)
Representative transcript
(Transmembrane and coiled-coil domain-containing protein 1; Transmembrane and coiled-coil domains protein 4; Xenogeneic cross-immune protein PCIA3;)
genome : 165,696,507 - 165,738,088 (41,582)
query : 1 - 1,421 (1,421/1,421)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000018169
(
AK093302
)
(Transmembrane and coiled-coil domain-containing protein 1 isoform c.)
genome : 165,696,543 - 165,796,992 (100,450)
query : 1 - 1,734 (1,734/1,734)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 6, cyto_nucl 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000692166 (
ENST00000580248
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,696,543 - 165,796,992 (100,450)
query : 1 - 1,735 (1,735/1,735)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 6, cyto_nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000075892
(
AF274935
)
(Transmembrane and coiled-coil domain-containing protein 1; Transmembrane and coiled-coil domains protein 4; Xenogeneic cross-immune protein PCIA3;)
genome : 165,696,685 - 165,737,995 (41,311)
query : 1 - 1,039 (1,039/1,067)
7 exons
identity = 0.972
3'(1.000;0.971;0.986;1.000;0.767;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000253071
(
AY359027
)
(Transmembrane and coiled-coil domain-containing protein 1; Transmembrane and coiled-coil domains protein 4; Xenogeneic cross-immune protein PCIA3;)
genome : 165,696,684 - 165,738,094 (41,411)
query : 1 - 1,249 (1,249/1,264)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000029348
(
BC000104
)
(Transmembrane and coiled-coil domain-containing protein 1; Transmembrane and coiled-coil domains protein 4; Xenogeneic cross-immune protein PCIA3;)
genome : 165,696,772 - 165,738,079 (41,308)
query : 1 - 1,146 (1,146/1,166)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000065793
(
AF070626
)
(Transmembrane and coiled-coil domain-containing protein 1; Transmembrane and coiled-coil domains protein 4; Xenogeneic cross-immune protein PCIA3;)
genome : 165,696,778 - 165,738,115 (41,338)
query : 1 - 1,176 (1,176/1,193)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000569387 (
ENST00000464650
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,696,775 - 165,738,113 (41,339)
query : 1 - 1,100 (1,100/1,100)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 6, cyto_nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000058651
(
AB020980
)
(Transmembrane and coiled-coil domain-containing protein 1; Transmembrane and coiled-coil domains protein 4; Xenogeneic cross-immune protein PCIA3;)
genome : 165,696,779 - 165,738,126 (41,348)
query : 1 - 1,186 (1,186/1,186)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000499693
(
AK316080
)
(Transmembrane and coiled-coil domain-containing protein 1 isoform c.)
genome : 165,696,836 - 165,738,092 (41,257)
query : 1 - 1,295 (1,295/1,295)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000493238
(
AK298614
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,696,895 - 165,738,126 (41,232)
query : 1 - 1,270 (1,270/1,270)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000075990
(
AF277194
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,697,214 - 165,737,996 (40,783)
query : 38 - 652 (615/653)
7 exons
identity = 0.963
3'(0.862;0.986;0.985;1.000;1.000;1.000;1.000)5'
coverage = 0.942
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000434821
(
AK316610
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,697,260 - 165,738,105 (40,846)
query : 1 - 684 (684/684)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002809 : Protein of unknown function DUF106, transmembrane
IPR008559 : Uncharacterised conserved protein UCP023322, transmembrane eukaryotic
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000580354 (
ENST00000476143
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,697,323 - 165,738,125 (40,803)
query : 1 - 581 (581/581)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21.5, cyto_mito 12, plas 4, extr 2, nucl 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000585255 (
ENST00000481278
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,712,406 - 165,738,074 (25,669)
query : 1 - 752 (752/752)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto 9, nucl 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0022700
HIT000570391 (
ENST00000465705
)
(Protein of unknown function DUF106, transmembrane family protein.)
genome : 165,712,416 - 165,738,155 (25,740)
query : 1 - 760 (760/760)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21.5, cyto_mito 12.5, nucl 3, cyto 2.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022700)
HIX0023704
HIT000044837
(
AK124964
)
(Conserved hypothetical protein.)
genome : 165,738,166 - 165,744,413 (6,248)
query : 1 - 2,150 (2,150/2,150)
2 exons
identity = 1.000
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto_nucl 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023704)
HIX0023704
HIT000521055 (
ENST00000423121
)
(Conserved hypothetical protein.)
genome : 165,738,166 - 165,744,413 (6,248)
query : 1 - 2,150 (2,150/2,150)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023704)
HIX0023704
HIT000034212
(
BC009228
)
(Conserved hypothetical protein.)
genome : 165,738,208 - 165,739,080 (873)
query : 1 - 873 (873/893)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 10.5, plas 2, extr 2,
mito 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023704)
HIX0023704
HIT000264589
(
BC071770
)
Representative transcript
(Conserved hypothetical protein.)
genome : 165,738,257 - 165,744,684 (6,428)
query : 1 - 2,055 (2,055/2,084)
3 exons
identity = 0.998
5'(1.000;0.996;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto_nucl 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023704)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001174652
HIX0160093
HIT000447623_09
(
DQ581092
)
Representative transcript
(Non-protein coding transcript.)
genome : 165,746,667 - 165,746,696 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160093)
HIX0160344
HIT000513828 (
ENST00000415894
)
(Ribosomal protein L26/L24P, eukaryotic/archaeal family protein.)
genome : 165,788,590 - 165,789,024 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 9, mito 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160344)
HIX0160344
HIT000712050 (
ENST00000600305
)
(Ribosomal protein L26/L24P, eukaryotic/archaeal family protein.)
genome : 165,788,590 - 165,788,997 (408)
query : 1 - 408 (408/408)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 9, mito 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160344)
HIX0001286
HIT000204204 (
NM_012474
)
(Uridine kinase like family protein.)
genome : 165,796,732 - 165,880,855 (84,124)
query : 1 - 4,920 (4,920/4,940)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, cysk 4, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000349159 (
ENST00000367879
)
(Uridine kinase like family protein.)
genome : 165,796,768 - 165,877,346 (80,579)
query : 1 - 1,375 (1,375/1,375)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, cysk 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000031280
(
BC002906
)
Representative transcript
(Uridine-cytidine kinase 2; UCK 2; EC=2.7.1.48; Cytidine monophosphokinase 2; Testis-specific protein TSA903; Uridine monophosphokinase 2;)
genome : 165,796,892 - 165,877,277 (80,386)
query : 1 - 1,182 (1,182/1,200)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, cysk 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000074735
(
AF236637
)
(Uridine-cytidine kinase 2; UCK 2; EC=2.7.1.48; Cytidine monophosphokinase 2; Testis-specific protein TSA903; Uridine monophosphokinase 2;)
genome : 165,797,061 - 165,877,338 (80,278)
query : 9 - 1,082 (1,074/1,121)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, cysk 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000353492 (
ENST00000372212
)
(Uridine kinase like family protein.)
genome : 165,797,059 - 165,877,607 (80,549)
query : 1 - 1,202 (1,202/1,202)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000489161
(
AK294537
)
(Uridine-cytidine kinase 2; UCK 2; EC=2.7.1.48; Cytidine monophosphokinase 2; Testis-specific protein TSA903; Uridine monophosphokinase 2;)
genome : 165,797,061 - 165,877,607 (80,547)
query : 3 - 1,202 (1,200/1,202)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000059915
(
AB062451
)
(Uridine-cytidine kinase 2; UCK 2; EC=2.7.1.48; Cytidine monophosphokinase 2; Testis-specific protein TSA903; Uridine monophosphokinase 2;)
genome : 165,797,113 - 165,877,060 (79,948)
query : 1 - 744 (744/744)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000101749
(
D78335
)
(Uridine-cytidine kinase 2; UCK 2; EC=2.7.1.48; Cytidine monophosphokinase 2; Testis-specific protein TSA903; Uridine monophosphokinase 2;)
genome : 165,861,889 - 165,877,337 (15,449)
query : 1 - 831 (831/831)
5 exons
identity = 0.992
5'(1.000;0.979;1.000;0.980;0.993)3'
coverage = 1.000
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 10, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000567173 (
ENST00000462329
)
(Uridine kinase like family protein.)
genome : 165,861,889 - 165,877,337 (15,449)
query : 1 - 830 (830/830)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12.5, cyto 12.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000568960 (
ENST00000464197
)
(Uridine kinase like family protein.)
genome : 165,863,403 - 165,877,027 (13,625)
query : 1 - 811 (811/811)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000573787 (
ENST00000469256
)
(Uridine kinase like family protein.)
genome : 165,864,813 - 165,877,311 (12,499)
query : 1 - 747 (747/747)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12.5, cyto 12.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000575276 (
ENST00000470820
)
(Uridine kinase like family protein.)
genome : 165,864,822 - 165,877,108 (12,287)
query : 1 - 1,083 (1,083/1,083)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12.5, cyto 12.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0161477
HIT000553191 (
ENST00000455257
)
(Hypothetical short protein.)
genome : 165,865,116 - 165,869,592 (4,477)
query : 1 - 347 (347/347)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161477)
HIX0001286
HIT000099780
(
BT006860
)
(Uridine kinase like family protein.)
genome : 165,865,521 - 165,877,058 (11,538)
query : 1 - 334 (334/336)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12.5, cyto 12.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000267707
(
CR456857
)
(Uridine kinase like family protein.)
genome : 165,865,521 - 165,877,058 (11,538)
query : 1 - 334 (334/336)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR000764 : Uridine kinase like
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12.5, cyto 12.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000568551 (
ENST00000463772
)
(Phosphoribulokinase/uridine kinase domain containing protein.)
genome : 165,867,216 - 165,877,346 (10,131)
query : 1 - 599 (599/599)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, pero 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000055406
(
BX640859
)
(Uridine-cytidine kinase 2; UCK 2; EC=2.7.1.48; Cytidine monophosphokinase 2; Testis-specific protein TSA903; Uridine monophosphokinase 2;)
genome : 165,871,856 - 165,880,854 (8,999)
query : 27 - 4,670 (4,644/4,723)
3 exons
identity = 0.997
5'(1.000;1.000;0.997)3'
coverage = 0.989
EC number :
EC 2.7.1.48
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006083 : Phosphoribulokinase/uridine kinase
GO :
0005524 : Molecular Function : ATP binding
0008152 : Biological Process : metabolic process
0016301 : Molecular Function : kinase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000583915 (
ENST00000479872
)
(Phosphoribulokinase/uridine kinase domain containing protein.)
genome : 165,871,856 - 165,880,855 (9,000)
query : 25 - 4,669 (4,645/4,669)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000579581 (
ENST00000475333
)
(Conserved hypothetical protein.)
genome : 165,873,303 - 165,877,185 (3,883)
query : 1 - 416 (416/416)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, nucl 2, mito 2, pero 2, mito_pero 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000659792 (
NR_037431
)
(Non-protein coding transcript.)
genome : 165,877,158 - 165,877,213 (56)
query : 1 - 56 (56/56)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000428605
(
AK309739
)
(Hypothetical protein.)
genome : 165,877,256 - 165,878,195 (940)
query : 1 - 940 (940/940)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, plas 10, mito 5.5, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000012409
(
AK055795
)
(Conserved hypothetical protein.)
genome : 165,880,633 - 166,059,452 (178,820)
query : 1 - 3,197 (3,197/3,197)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 9, cyto 8, cyto_mito 7.16667,
nucl 6.5, cyto_pero 5.83333, mito_nucl 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0001286
HIT000389290
(
BC127662
)
(Hypothetical short protein.)
genome : 165,891,059 - 166,056,349 (165,291)
query : 4 - 417 (414/423)
4 exons
identity = 0.993
5'(0.939;1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0160508
HIT000520034 (
ENST00000422100
)
(Ribosomal protein S3Ae family protein.)
genome : 165,991,452 - 165,992,264 (813)
query : 1 - 813 (813/813)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160508)
HIX0213748
HIT000011961
(
AK055347
)
Representative transcript
(Conserved hypothetical protein.)
genome : 166,026,672 - 166,028,709 (2,038)
query : 1 - 2,035 (2,035/2,047)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, cyto_nucl 2.83333, cyto_pero 2.33333,
extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213748)
HIX0213748
HIT000707223 (
ENST00000595430
)
(Conserved hypothetical protein.)
genome : 166,026,679 - 166,028,709 (2,031)
query : 1 - 2,031 (2,031/2,031)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, cyto_nucl 2.83333, cyto_pero 2.33333,
extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213748)
HIX0028733
HIT000554834 (
ENST00000456900
)
(Protein FAM78B.)
genome : 166,028,926 - 166,135,618 (106,693)
query : 1 - 2,300 (2,300/2,300)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, E.R._mito 7, nucl 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0028733
HIT000539583 (
ENST00000441649
)
(Protein FAM78B.)
genome : 166,029,138 - 166,135,471 (106,334)
query : 1 - 2,264 (2,264/2,264)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15, nucl 3, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0028733
HIT000092856
(
BC032900
)
(Protein FAM78B.)
genome : 166,029,416 - 166,039,596 (10,181)
query : 1 - 1,010 (1,010/1,014)
2 exons
identity = 0.996
3'(0.998;0.994)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0028733
HIT000494570
(
AK299946
)
Representative transcript
(Protein FAM78B.)
genome : 166,029,603 - 166,135,522 (105,920)
query : 1 - 1,530 (1,530/1,530)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, E.R._mito 7, nucl 5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC132161
Gallus
sp. (Chicken) : ENSGALT00000004803
Macaca
sp. (Macaque) : ENSMMUT00000007400
Monodelphis
sp. (Opossum) : ENSMODT00000001679
Oryzias
sp. (Medaka) : ENSORLT00000005268
Oryzias
sp. (Medaka) : ENSORLT00000005689
Pongo
sp. (Orangutan) : ENSPPYT00000000682
Tetraodon
sp. (Tetraodon) : GSTENT00012658001
Takifugu
sp. (Fugu) : SINFRUT00000142281
Rattus
sp. (Rat) : XM_001075923
Pan
sp. (Chimpanzee) : XM_001174671
Equus
sp. (Horse) : XM_001492878
Danio
sp. (Zebrafish) : XM_001923138
Bos
sp. (Cow) : XM_582037
Canis
sp. (Dog) : XM_846100
HIX0028733
HIT000340639
(
BC114214
)
(Protein FAM78B.)
genome : 166,039,256 - 166,136,206 (96,951)
query : 1 - 1,598 (1,598/1,676)
3 exons
identity = 0.999
3'(0.999;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, E.R._mito 7, nucl 5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0028733
HIT000365531 (
NM_001017961
)
(Protein FAM78B.)
genome : 166,039,256 - 166,135,958 (96,703)
query : 1 - 1,481 (1,481/1,481)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, E.R._mito 7, nucl 5, cyto_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0028733
HIT000308721 (
ENST00000354422
)
(Protein FAM78B.)
genome : 166,039,256 - 166,135,952 (96,697)
query : 1 - 1,475 (1,475/1,475)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, E.R._mito 7, nucl 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0028733
HIT000130983 (
ENST00000338353
)
(Protein FAM78B.)
genome : 166,039,257 - 166,136,206 (96,950)
query : 1 - 1,597 (1,597/1,597)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7, E.R._mito 7, nucl 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028733)
HIX0021909
HIT000005409
(
AK022135
)
Representative transcript
(Conserved hypothetical protein.)
genome : 166,042,789 - 166,045,355 (2,567)
query : 1 - 2,567 (2,567/2,567)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021909)
HIX0001286
HIT000347416 (
ENST00000366136
)
(Conserved hypothetical protein.)
genome : 166,050,420 - 166,056,720 (6,301)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto_nucl 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001286)
HIX0161376
HIT000549718 (
ENST00000451784
)
(Conserved hypothetical protein.)
genome : 166,117,019 - 166,134,332 (17,314)
query : 1 - 484 (484/484)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161376)
HIX0117458
HIT000127001_02 (
ENST00000331029
)
(Zinc finger, RanBP2-type domain containing protein.)
genome : 166,244,691 - 166,246,867 (2,177)
query : 14 - 2,078 (2,065/2,267)
2 exons
identity = 0.964
3'(0.952;0.976)5'
coverage = 0.911
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
HIX0117458
HIT000512117_02 (
ENST00000414183
)
(Zinc finger, RanBP2-type domain containing protein.)
genome : 166,244,691 - 166,246,855 (2,165)
query : 1 - 2,182 (2,182/2,189)
1 exon
identity = 0.955
3'(0.955)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
HIX0117458
HIT000127563_02 (
ENST00000332035
)
(Zinc finger, RanBP2-type domain containing protein.)
genome : 166,244,691 - 166,246,845 (2,155)
query : 1 - 1,989 (1,989/1,989)
2 exons
identity = 0.961
3'(0.959;0.969)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
HIX0117458
HIT000483863 (
ENST00000400979
)
(Conserved hypothetical protein.)
genome : 166,244,866 - 166,246,834 (1,969)
query : 1 - 1,969 (1,969/1,969)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 8.5, mito_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
HIX0117458
pHIT000002883 ( pHIT000002883 )
Representative transcript
(Conserved hypothetical protein.)
genome : 166,244,927 - 166,246,834 (1,908)
query : 1 - 1,590 (1,590/1,590)
2 exons
InterPro :
IPR000504 : RNA recognition motif domain
IPR001876 : Zinc finger, RanBP2-type
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
CAGE tag :
H40BC73I1611
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC068397
Canis
sp. (Dog) : ENSCAFT00000019701
Oryzias
sp. (Medaka) : ENSORLT00000008430
Pongo
sp. (Orangutan) : ENSPPYT00000000681
Tetraodon
sp. (Tetraodon) : GSTENT00029479001
Takifugu
sp. (Fugu) : SINFRUT00000155145
Monodelphis
sp. (Opossum) : XM_001372950
Pan
sp. (Chimpanzee) : XR_021516
Mus
sp. (Mouse) : XR_033621
HIX0117458
HIT000535089_02 (
ENST00000437155
)
(Hypothetical protein.)
genome : 166,245,960 - 166,246,867 (908)
query : 23 - 933 (911/933)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
HIX0214078
eHIT000012331 ( ESTsASS_1_2337 )
Representative transcript
(Non-protein coding transcript.)
genome : 166,304,121 - 166,304,999 (879)
query : 1 - 423 (423/423)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214078)
ESTs used for assembly :
BG216067
HIX0161297
HIT000546577 (
ENST00000448643
)
(Conserved hypothetical protein.)
genome : 166,356,964 - 166,421,869 (64,906)
query : 1 - 810 (810/810)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 3, cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161297)
HIX0160921
HIT000533979 (
ENST00000436045
)
(Flavin monooxygenase-like family protein.)
genome : 166,443,982 - 166,450,802 (6,821)
query : 1 - 768 (768/768)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, extr 7.5, mito_nucl 7.5, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160921)
HIX0160646
HIT000524453 (
ENST00000426519
)
(Hypothetical short protein.)
genome : 166,445,009 - 166,459,276 (14,268)
query : 1 - 701 (701/701)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 5.5, cyto_nucl 5, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160646)
HIX0160872
HIT000532395 (
ENST00000434461
)
(Flavin monooxygenase-like family protein.)
genome : 166,535,415 - 166,549,942 (14,528)
query : 1 - 1,600 (1,600/1,600)
8 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.929;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14, cyto 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160872)
HIX0160872
HIT000639973 (
ENST00000540928
)
(Flavin monooxygenase-like family protein.)
genome : 166,535,415 - 166,543,011 (7,597)
query : 1 - 627 (627/627)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 9, mito 5.5, cyto_pero 5.5,
cyto_plas 5.5, cyto_golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160872)
HIX0001288
HIT000582002 (
ENST00000477875
)
(Dimethylaniline monooxygenase [N-oxide-forming] 5; EC=1.14.13.8; Dimethylaniline oxidase 5; FMO 1C1; FMO form 3; Hepatic flavin-containing monooxygenase 5; FMO 5;)
genome : 166,572,912 - 166,594,475 (21,564)
query : 1 - 1,605 (1,605/1,605)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.13.8
KEGG pathway :
00680 : Methane metabolism (75)
00982 : Drug metabolism - cytochrome P450 (8)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto 8.5, E.R._mito 6, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001288)
HIX0001288
HIT000036650
(
BC014341
)
Representative transcript
(Dimethylaniline monooxygenase [N-oxide-forming] 5; EC=1.14.13.8; Dimethylaniline oxidase 5; FMO 1C1; FMO form 3; Hepatic flavin-containing monooxygenase 5; FMO 5;)
genome : 166,573,153 - 166,594,472 (21,320)
query : 5 - 1,365 (1,361/1,394)
7 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 1.14.13.8
KEGG pathway :
00680 : Methane metabolism (75)
00982 : Drug metabolism - cytochrome P450 (8)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000960 : Flavin monooxygenase FMO
IPR020946 : Flavin monooxygenase-like
GO :
0004499 : Molecular Function : N,N-dimethylaniline monooxygenase activity
0050660 : Molecular Function : flavin adenine dinucleotide binding
0050661 : Molecular Function : NADP binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 9.5, E.R._mito 7, extr 1, nucl 1,
pero 1, golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001288)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK029219
Danio
sp. (Zebrafish) : BC124712
Gallus
sp. (Chicken) : ENSGALT00000002644
Oryzias
sp. (Medaka) : ENSORLT00000018194
Pongo
sp. (Orangutan) : ENSPPYT00000000680
Pan
sp. (Chimpanzee) : ENSPTRT00000058568
Takifugu
sp. (Fugu) : SINFRUT00000147115
Rattus
sp. (Rat) : XM_001063500
Monodelphis
sp. (Opossum) : XM_001370748
HIX0001288
HIT000367203 (
NR_002925
)
(Dimethylaniline monooxygenase [N-oxide-forming] 5; EC=1.14.13.8; Dimethylaniline oxidase 5; FMO 1C1; FMO form 3; Hepatic flavin-containing monooxygenase 5; FMO 5;)
genome : 166,573,153 - 166,594,472 (21,320)
query : 1 - 1,361 (1,361/1,390)
7 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.13.8
KEGG pathway :
00680 : Methane metabolism (75)
00982 : Drug metabolism - cytochrome P450 (8)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 9.5, E.R._mito 7, extr 1, nucl 1,
pero 1, golg 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001288)
HIX0001288
HIT000592107 (
ENST00000488458
)
(Dimethylaniline monooxygenase [N-oxide-forming] 5; EC=1.14.13.8; Dimethylaniline oxidase 5; FMO 1C1; FMO form 3; Hepatic flavin-containing monooxygenase 5; FMO 5;)
genome : 166,581,707 - 166,600,637 (18,931)
query : 1 - 1,535 (1,535/1,535)
8 exons
identity = 0.996
5'(1.000;1.000;1.000;0.974;0.989;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.13.8
KEGG pathway :
00680 : Methane metabolism (75)
00982 : Drug metabolism - cytochrome P450 (8)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_mito 7.83333, E.R._mito 5.66667,
pero 5.5, mito_pero 5.33333, E.R. 4.5, mito 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001288)
HIX0214458
HIT000533610 (
ENST00000435676
)
(Conserved hypothetical protein.)
genome : 166,026,674 - 166,135,462 (108,789)
query : 1 - 4,399 (4,399/4,399)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, pero 5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214458)
HIX0214458
HIT000563935
(
AB593134
)
Representative transcript
(Conserved hypothetical protein.)
genome : 166,026,690 - 166,135,992 (109,303)
query : 1 - 3,984 (3,984/3,984)
2 exons
identity = 0.997
3'(0.997;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 11.5, extr 8, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214458)
HIX0117458
pHIT000002883 ( pHIT000002883 )
Representative transcript
(Conserved hypothetical protein.)
genome : 166,244,927 - 166,246,834 (1,908)
query : 1 - 1,590 (1,590/1,590)
2 exons
InterPro :
IPR000504 : RNA recognition motif domain
IPR001876 : Zinc finger, RanBP2-type
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117458)
CAGE tag :
H09BA60L1307,H21BA53P1412,H22BA72D1602
H27BB61H2304,H40BC73I1611
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC068397
Canis
sp. (Dog) : ENSCAFT00000019701
Oryzias
sp. (Medaka) : ENSORLT00000008430
Pongo
sp. (Orangutan) : ENSPPYT00000000681
Tetraodon
sp. (Tetraodon) : GSTENT00029479001
Takifugu
sp. (Fugu) : SINFRUT00000155145
Monodelphis
sp. (Opossum) : XM_001372950
Pan
sp. (Chimpanzee) : XR_021516
Mus
sp. (Mouse) : XR_033621
HIX0214078
eHIT000012331 ( ESTsASS_1_2337 )
Representative transcript
(Non-protein coding transcript.)
genome : 166,304,121 - 166,304,999 (879)
query : 1 - 423 (423/423)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214078)
ESTs used for assembly :
BG216067
AL390119.25
165000001-165001677 F +
NCBI
AL360088.5
165001678-165163690 F -
NCBI
AL390730.12
165163691-165279449 F +
NCBI
AL590112.5
165279450-165312570 F +
NCBI
AL160058.8
165312571-165465939 F +
NCBI
AL157714.8
165465940-165544396 F +
NCBI
AL356441.16
165544397-165618310 F +
NCBI
AL451074.13
165618311-165804527 F +
NCBI
AL358115.18
165804528-165902393 F +
NCBI
AL606495.6
165902394-166021357 F +
NCBI
AL626787.9
166021358-166091242 F +
NCBI
AL596087.11
166091243-166269960 F +
NCBI
AL390115.18
166269961-166370493 F +
NCBI
AL583804.5
166370494-166535335 F +
NCBI
AL611962.6
166535336-166600000 F +
NCBI