bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000579
HIT000034102
(
BC008953
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,805 - 52,520,822 (35,018)
query : 1 - 1,374 (1,374/1,400)
7 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000070763
(
AF131758
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,805 - 52,520,878 (35,074)
query : 1 - 1,429 (1,429/1,452)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000205704 (
NM_015913
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,805 - 52,521,843 (36,039)
query : 1 - 2,394 (2,394/2,412)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000081484
(
AF543416
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,805 - 52,521,047 (35,243)
query : 1 - 1,598 (1,598/1,616)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000030450
(
BC001493
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,805 - 52,520,844 (35,040)
query : 1 - 1,395 (1,395/1,413)
7 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000034073
(
BC008913
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,807 - 52,520,873 (35,067)
query : 1 - 1,422 (1,422/1,441)
7 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000352906 (
ENST00000371626
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,803 - 52,521,843 (36,041)
query : 1 - 2,396 (2,396/2,396)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000012783
(
AK056169
)
Representative transcript
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,806 - 52,521,843 (36,038)
query : 1 - 2,393 (2,393/2,393)
7 exons
identity = 0.998
3'(1.000;0.999)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC006857
Danio
sp. (Zebrafish) : BC095367
Rattus
sp. (Rat) : BC100255
Bos
sp. (Cow) : BC102314
Equus
sp. (Horse) : ENSECAT00000009869
Monodelphis
sp. (Opossum) : ENSMODT00000039660
Oryzias
sp. (Medaka) : ENSORLT00000004491
Pongo
sp. (Orangutan) : ENSPPYT00000001623
Pan
sp. (Chimpanzee) : ENSPTRT00000001390
Takifugu
sp. (Fugu) : SINFRUT00000182118
Macaca
sp. (Macaque) : XM_001111349
Gallus
sp. (Chicken) : XM_001235372
Canis
sp. (Dog) : XM_847187
HIX0000579
HIT000082444
(
AK075409
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,485,806 - 52,520,841 (35,036)
query : 1 - 1,391 (1,391/1,391)
7 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000253026
(
AY358982
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,486,326 - 52,520,874 (34,549)
query : 1 - 904 (904/904)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
InterPro :
IPR012336 : Thioredoxin-like fold
IPR017937 : Thioredoxin, conserved site
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000576993 (
ENST00000472624
)
(Thioredoxin domain-containing protein 12; EC=1.8.4.2; Endoplasmic reticulum resident protein 18; ER protein 18; ERp18; Endoplasmic reticulum resident protein 19; ER protein 19; ERp19; Thioredoxin-like protein p19; hTLP19; Precursor;)
genome : 52,486,586 - 52,520,848 (34,263)
query : 1 - 800 (800/800)
8 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.8.4.2
KEGG pathway :
00480 : Glutathione metabolism (37)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000726691 (
NR_046405
)
(Protein KTI12 homolog;)
genome : 52,497,769 - 52,521,843 (24,075)
query : 1 - 3,188 (3,188/3,188)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 7.33333, mito 7, cyto 6.5,
cyto_pero 4.83333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0000579
HIT000726692 (
NR_046406
)
(Protein KTI12 homolog;)
genome : 52,497,769 - 52,521,843 (24,075)
query : 1 - 3,065 (3,065/3,065)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, mito 10, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000579)
HIX0203711
HIT000523736 (
ENST00000425802
)
(Conserved hypothetical protein.)
genome : 52,499,063 - 52,509,951 (10,889)
query : 1 - 762 (762/762)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203711)
HIX0159847
HIT000526728 (
ENST00000428794
)
(Conserved hypothetical protein.)
genome : 52,516,590 - 52,518,355 (1,766)
query : 1 - 391 (391/391)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11.5, extr 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159847)
HIX0000581
HIT000119702 (
ENST00000313334
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,797 - 52,556,388 (34,592)
query : 1 - 4,703 (4,703/4,703)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9.5, cyto_nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000317856 (
NM_152265
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,857 - 52,556,388 (34,532)
query : 1 - 4,643 (4,643/4,643)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9.5, cyto_nucl 9.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000560385 (
NM_001136497
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,857 - 52,556,388 (34,532)
query : 1 - 4,576 (4,576/4,576)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000723022 (
NM_001243767
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,857 - 52,556,388 (34,532)
query : 1 - 4,441 (4,441/4,441)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, mito 9, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000581957 (
ENST00000477828
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,871 - 52,552,419 (30,549)
query : 1 - 892 (892/892)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000592915_01 (
ENST00000489308
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,943 - 52,552,827 (30,885)
query : 1 - 794 (794/794)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, mito 9, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000625347 (
ENST00000526132
)
(Conserved hypothetical protein.)
genome : 52,521,944 - 52,552,546 (30,603)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 10, nucl 3.5, cyto_nucl 3, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000264333
(
BC070378
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,967 - 52,552,650 (30,684)
query : 1 - 795 (795/826)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9.5, cyto_nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000011022
(
AK027750
)
Representative transcript
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,973 - 52,554,062 (32,090)
query : 1 - 2,199 (2,199/2,203)
6 exons
identity = 0.998
5'(0.975;1.000;1.000;1.000;0.983;0.999)3'
coverage = 0.998
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9.5, cyto_nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720471
Mus
sp. (Mouse) : AK076283
Bos
sp. (Cow) : BC112459
Danio
sp. (Zebrafish) : BC150462
Tetraodon
sp. (Tetraodon) : CR631374
Tetraodon
sp. (Tetraodon) : CR716941
Pongo
sp. (Orangutan) : CR858422
Oryzias
sp. (Medaka) : ENSORLT00000004523
Takifugu
sp. (Fugu) : SINFRUT00000149254
Rattus
sp. (Rat) : XM_001067412
Macaca
sp. (Macaque) : XM_001111379
Monodelphis
sp. (Opossum) : XM_001372076
Equus
sp. (Horse) : XM_001490954
Pan
sp. (Chimpanzee) : XM_513405
Canis
sp. (Dog) : XM_532577
HIX0000581
HIT000010854
(
AK027582
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,976 - 52,554,090 (32,115)
query : 1 - 2,160 (2,160/2,160)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000577297_01 (
ENST00000472944
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,976 - 52,554,090 (32,115)
query : 1 - 2,159 (2,159/2,159)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000623675 (
ENST00000524414
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,986 - 52,530,971 (8,986)
query : 1 - 608 (608/608)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, mito 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000587902 (
ENST00000484036
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,993 - 52,552,282 (30,290)
query : 1 - 941 (941/941)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 10.5, cyto_nucl 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000039504
(
BC022371
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,995 - 52,553,824 (31,830)
query : 1 - 1,940 (1,940/2,009)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.979
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9.5, cyto_nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000475810_02 (
ENST00000392326
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,521,995 - 52,552,661 (30,667)
query : 1 - 712 (712/712)
5 exons
identity = 0.987
5'(0.982;0.983;1.000;1.000;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000632910 (
ENST00000533836
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,522,004 - 52,549,172 (27,169)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000258963
(
BC021004
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,522,022 - 52,586,956 (64,935)
query : 10 - 2,196 (2,187/2,209)
6 exons
identity = 0.989
5'(1.000;1.000;1.000;1.000;0.999;0.685)3'
coverage = 0.994
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0000581
HIT000476273_02 (
ENST00000392798
)
(Transcription factor BTF3 homolog 4; Basic transcription factor 3-like 4;)
genome : 52,530,572 - 52,552,428 (21,857)
query : 1 - 346 (346/346)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000581)
HIX0213873
HIT000070721
(
AF130420
)
Representative transcript
(FYVE zinc finger domain containing protein.)
genome : 52,608,046 - 52,729,719 (121,674)
query : 1 - 2,625 (2,625/2,625)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213873)
HIX0213873
HIT000314883 (
ENST00000361625
)
(FYVE zinc finger domain containing protein.)
genome : 52,608,046 - 52,729,719 (121,674)
query : 1 - 2,625 (2,625/2,625)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213873)
HIX0160295
HIT000511993_01 (
ENST00000414059
)
(GroES (chaperonin 10)-like domain containing protein.)
genome : 52,625,933 - 52,626,272 (340)
query : 1 - 340 (340/340)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 9.5, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160295)
HIX0160250
HIT000510719 (
ENST00000412785
)
(Conserved hypothetical protein.)
genome : 52,627,858 - 52,628,698 (841)
query : 1 - 841 (841/841)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 8, cyto_nucl 7, nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160250)
HIX0178300
HIT000527678 (
ENST00000429744
)
(Type II toxin-antitoxin system, antitoxin Phd/YefM family protein.)
genome : 52,645,520 - 52,646,225 (706)
query : 1 - 706 (706/706)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13.5, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178300)
HIX0161460
HIT000552736 (
ENST00000454802
)
(Ribosomal protein L6, alpha-beta domain containing protein.)
genome : 52,655,588 - 52,655,981 (394)
query : 1 - 394 (394/394)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161460)
HIX0160722
HIT000526745 (
ENST00000428811
)
(Conserved hypothetical protein.)
genome : 52,717,734 - 52,718,445 (712)
query : 1 - 344 (344/344)
2 exons
identity = 0.985
3'(0.980;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160722)
HIX0117438
HIT000479348 (
ENST00000395991
)
(Anaphase-promoting complex, subunit 10/DOC domain containing protein.)
genome : 52,719,293 - 52,719,848 (556)
query : 1 - 556 (556/556)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117438)
HIX0214188
HIT000573670 (
ENST00000469134
)
(Conserved hypothetical protein.)
genome : 52,761,567 - 52,800,879 (39,313)
query : 1 - 859 (859/859)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, cyto_nucl 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214188)
HIX0023666
HIT000043159
(
AK123286
)
Representative transcript
(Hypothetical protein.)
genome : 52,763,305 - 52,765,962 (2,658)
query : 1 - 2,671 (2,671/2,671)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023666)
HIX0000583
HIT000575299 (
ENST00000470844
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,811,395 - 52,820,537 (9,143)
query : 1 - 728 (728/728)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 10.6667, mito 9, cyto_plas 8,
extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000366913 (
NM_032449
)
(Coiled-coil and C2 domain-containing protein 1B; Five prime repressor element under dual repression-binding protein 2; FRE under dual repression-binding protein 2; Freud-2;)
genome : 52,816,266 - 52,831,877 (15,612)
query : 1 - 5,653 (5,653/5,670)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 7, mito 3, extr 2, mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000001551
(
AB058739
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,816,267 - 52,826,704 (10,438)
query : 1 - 5,083 (5,083/5,083)
20 exons
identity = 0.994
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000352866 (
ENST00000371586
)
(Coiled-coil and C2 domain-containing protein 1B; Five prime repressor element under dual repression-binding protein 2; FRE under dual repression-binding protein 2; Freud-2;)
genome : 52,816,269 - 52,831,865 (15,597)
query : 1 - 5,638 (5,638/5,638)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 7, mito 3, extr 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0029116
HIT000020342
(
AK095487
)
Representative transcript
(Conserved hypothetical protein.)
genome : 52,816,271 - 52,818,452 (2,182)
query : 1 - 2,182 (2,182/2,182)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029116)
HIX0000583
HIT000033528
(
BC007912
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,204 - 52,824,080 (5,877)
query : 1 - 1,869 (1,869/1,886)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR006608 : Domain of unknown function DM14
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000095584
(
BC039308
)
Representative transcript
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,204 - 52,831,828 (13,625)
query : 1 - 4,335 (4,335/4,349)
24 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997;0.948;
0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146601
Rattus
sp. (Rat) : BC089922
Oryzias
sp. (Medaka) : ENSORLT00000004583
Pongo
sp. (Orangutan) : ENSPPYT00000001619
Tetraodon
sp. (Tetraodon) : GSTENT00027660001
Takifugu
sp. (Fugu) : SINFRUT00000165221
Macaca
sp. (Macaque) : XM_001105514
Pan
sp. (Chimpanzee) : XM_001144134
Gallus
sp. (Chicken) : XM_001235392
Equus
sp. (Horse) : XM_001490652
Canis
sp. (Dog) : XM_539614
Bos
sp. (Cow) : XM_588670
Danio
sp. (Zebrafish) : XM_687077
HIX0000583
HIT000037736
(
BC016880
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,210 - 52,825,868 (7,659)
query : 1 - 2,520 (2,520/2,535)
19 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR006608 : Domain of unknown function DM14
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000112479 (
ENST00000284376
)
(Coiled-coil and C2 domain-containing protein 1B; Five prime repressor element under dual repression-binding protein 2; FRE under dual repression-binding protein 2; Freud-2;)
genome : 52,818,204 - 52,831,851 (13,648)
query : 1 - 3,377 (3,377/3,377)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 7, mito 3, extr 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000594672 (
ENST00000491136
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,204 - 52,831,828 (13,625)
query : 1 - 4,335 (4,335/4,335)
24 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.948;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000050145
(
AK130874
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,209 - 52,831,841 (13,633)
query : 1 - 1,083 (1,083/1,083)
5 exons
identity = 0.993
3'(1.000;0.923;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000565643 (
ENST00000460727
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,209 - 52,831,841 (13,633)
query : 1 - 1,083 (1,083/1,083)
5 exons
identity = 0.993
3'(1.000;0.923;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000018472
(
AK093605
)
(Conserved hypothetical protein.)
genome : 52,818,209 - 52,820,177 (1,969)
query : 1 - 1,969 (1,969/1,969)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, extr_plas 7, cyto 6, mito 6, cyto_mito 6,
extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000535955 (
ENST00000438021
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,210 - 52,825,868 (7,659)
query : 1 - 2,521 (2,521/2,521)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 7, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
eHIT000010743 ( ESTsASS_1_749 )
(Non-protein coding transcript.)
genome : 52,818,478 - 52,831,877 (13,400)
query : 1 - 3,129 (3,129/3,129)
25 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
ESTs used for assembly :
C06235,BI160674,BM716989,CO394179
BG253461,CR984707,EC495203,BE888083
CV022916,CF785948,CN279194,DA254660
CV027039,BX337298,CN365575,BG766526
CX866810,BQ277673,DB458797,CN279193
BQ936413,CD516225,CN365574,BG482656
BG763659,BF808249,CN365576,CR977253
BG982546,DB213836,Z41996,BM849183
BQ073406,CR988452
HIX0000583
HIT000088271
(
BC014080
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,761 - 52,826,772 (8,012)
query : 1 - 2,640 (2,640/2,661)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000565196 (
ENST00000460261
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,818,761 - 52,826,772 (8,012)
query : 1 - 2,640 (2,640/2,640)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000548876 (
ENST00000450942
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,819,191 - 52,828,309 (9,119)
query : 1 - 2,318 (2,318/2,318)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_golg 9, mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000565301 (
ENST00000460370
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,819,203 - 52,821,338 (2,136)
query : 1 - 577 (577/577)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000536765 (
ENST00000438831
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,820,055 - 52,831,864 (11,810)
query : 1 - 2,658 (2,658/2,658)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 7, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000595913 (
ENST00000492426
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,820,327 - 52,820,637 (311)
query : 1 - 170 (170/170)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 7, mito 4, nucl 2.5,
mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000589744 (
ENST00000485966
)
(Coiled-coil and C2 domain-containing protein 1B.)
genome : 52,820,559 - 52,822,232 (1,674)
query : 1 - 532 (532/532)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0000583
HIT000598177 (
ENST00000494789
)
(Non-protein coding transcript.)
genome : 52,821,927 - 52,822,485 (559)
query : 1 - 166 (166/166)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
HIX0029379
HIT000259780
(
BC057844
)
Representative transcript
(Group XIIA secretory phospholipase A2 precursor.)
genome : 52,834,192 - 52,835,939 (1,748)
query : 1 - 1,746 (1,746/1,762)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
EC number :
EC 3.1.1.4
KEGG pathway :
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00592 : alpha-Linolenic acid metabolism (10)
01100 : Metabolic pathways (1346)
InterPro :
IPR010711 : Phospholipase A2, group XII secretory
GO :
0004623 : Molecular Function : phospholipase A2 activity
0005509 : Molecular Function : calcium ion binding
0005576 : Cellular Component : extracellular region
0016042 : Biological Process : lipid catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10.5, cyto_nucl 7.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029379)
HIX0029379
HIT000600940_01 (
ENST00000497678
)
(Group XIIA secretory phospholipase A2 precursor.)
genome : 52,834,349 - 52,834,916 (568)
query : 1 - 568 (568/568)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029379)
HIX0029379
HIT000603103_01 (
ENST00000502772
)
(Group XIIA secretory phospholipase A2 precursor.)
genome : 52,834,555 - 52,834,798 (244)
query : 2 - 245 (244/245)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4, mito 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029379)
HIX0000584
HIT000035276
(
BC011539
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,503 - 52,870,059 (31,557)
query : 1 - 3,080 (3,080/3,136)
17 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.979;1.000)5'
coverage = 1.000
InterPro :
IPR001025 : Bromo adjacent homology (BAH) domain
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015163 : CDC6, C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003682 : Molecular Function : chromatin binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000200920 (
NM_004153
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,501 - 52,870,143 (31,643)
query : 1 - 3,169 (3,169/3,192)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000655679 (
NM_001190818
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,501 - 52,870,143 (31,643)
query : 1 - 3,166 (3,166/3,189)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000655680 (
NM_001190819
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,501 - 52,870,143 (31,643)
query : 1 - 3,154 (3,154/3,177)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000219857
(
U43416
)
Representative transcript
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,501 - 52,870,123 (31,623)
query : 2 - 3,149 (3,148/3,172)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.976)5'
coverage = 1.000
InterPro :
IPR001025 : Bromo adjacent homology (BAH) domain
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015163 : CDC6, C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003682 : Molecular Function : chromatin binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB105378
Gallus
sp. (Chicken) : AJ719459
Mus
sp. (Mouse) : AK145260
Danio
sp. (Zebrafish) : BC047200
Bos
sp. (Cow) : BC133326
Monodelphis
sp. (Opossum) : ENSMODT00000039680
Oryzias
sp. (Medaka) : ENSORLT00000016987
Pongo
sp. (Orangutan) : ENSPPYT00000001617
Tetraodon
sp. (Tetraodon) : GSTENT00010045001
Takifugu
sp. (Fugu) : SINFRUT00000142134
Macaca
sp. (Macaque) : XM_001111614
Equus
sp. (Horse) : XM_001493726
Pan
sp. (Chimpanzee) : XM_513408
Canis
sp. (Dog) : XM_532575
HIX0000584
HIT000352848 (
ENST00000371568
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,501 - 52,870,131 (31,631)
query : 1 - 3,157 (3,157/3,157)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000352846 (
ENST00000371566
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,503 - 52,870,059 (31,557)
query : 1 - 3,080 (3,080/3,080)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000219703
(
U40152
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,506 - 52,870,131 (31,626)
query : 2 - 3,152 (3,151/3,153)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995)5'
coverage = 0.999
InterPro :
IPR001025 : Bromo adjacent homology (BAH) domain
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015163 : CDC6, C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003682 : Molecular Function : chromatin binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000498044
(
AK303420
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,506 - 52,870,084 (31,579)
query : 1 - 3,090 (3,090/3,090)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001025 : Bromo adjacent homology (BAH) domain
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015163 : CDC6, C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003682 : Molecular Function : chromatin binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000580529 (
ENST00000476332
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,540 - 52,854,307 (15,768)
query : 1 - 1,165 (1,165/1,165)
8 exons
identity = 0.997
3'(1.000;0.963;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13, nucl 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0000584
HIT000424706
(
AK291909
)
(Origin recognition complex subunit 1; Replication control protein 1;)
genome : 52,838,592 - 52,870,118 (31,527)
query : 1 - 3,053 (3,053/3,053)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;0.997;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001025 : Bromo adjacent homology (BAH) domain
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015163 : CDC6, C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003682 : Molecular Function : chromatin binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000584)
HIX0214142
HIT000434487
(
AK315621
)
Representative transcript
(Pre-mRNA-splicing factor 38 family protein.)
genome : 52,870,236 - 52,871,385 (1,150)
query : 2 - 351 (350/367)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.954
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.6667, cyto_plas 9.33333,
nucl 5.5, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214142)
HIX0214084
HIT000011114
(
AK027842
)
Representative transcript
(Pre-mRNA-splicing factor 38 family protein.)
genome : 52,871,446 - 52,883,850 (12,405)
query : 2 - 2,204 (2,203/2,204)
9 exons
identity = 0.999
5'(0.985;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
IPR024767 : Pre-mRNA-splicing factor 38, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214084)
HIX0000586
HIT000627635 (
ENST00000528457
)
(Conserved hypothetical protein.)
genome : 52,873,954 - 52,896,899 (22,946)
query : 1 - 553 (553/553)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 12.5, nucl 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000627133 (
ENST00000527941
)
(Conserved hypothetical protein.)
genome : 52,873,957 - 52,896,784 (22,828)
query : 1 - 691 (691/691)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, cyto_nucl 6.83333, cyto_pero 5.83333,
mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000057712
(
BX649065
)
(Conserved hypothetical protein.)
genome : 52,888,949 - 52,890,935 (1,987)
query : 1 - 1,987 (1,987/2,003)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 10, pero 3, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000008972
(
AK025698
)
Representative transcript
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,888,949 - 52,927,417 (38,469)
query : 1 - 2,503 (2,503/2,518)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 13, extr 9, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000056895
(
BX648248
)
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,889,075 - 52,900,342 (11,268)
query : 1 - 5,763 (5,763/5,783)
2 exons
identity = 0.997
3'(0.999;0.996)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 12.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000571093 (
ENST00000466440
)
(Conserved hypothetical protein.)
genome : 52,889,075 - 52,900,342 (11,268)
query : 1 - 5,763 (5,763/5,763)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000597866 (
ENST00000494469
)
(Conserved hypothetical protein.)
genome : 52,889,235 - 52,897,110 (7,876)
query : 1 - 827 (827/827)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.8333, cyto 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000576038 (
ENST00000471623
)
(Conserved hypothetical protein.)
genome : 52,889,308 - 52,896,753 (7,446)
query : 1 - 506 (506/506)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000630843 (
ENST00000531722
)
(PAP/25A-associated domain containing protein.)
genome : 52,896,798 - 52,912,300 (15,503)
query : 1 - 1,016 (1,016/1,016)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000578744 (
ENST00000474453
)
(PAP/25A-associated domain containing protein.)
genome : 52,896,919 - 52,912,322 (15,404)
query : 1 - 1,010 (1,010/1,010)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000574698 (
ENST00000470212
)
(Zinc finger, CCHC-type domain containing protein.)
genome : 52,896,960 - 52,902,927 (5,968)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, extr 9, nucl 9, cyto 8.5,
cyto_pero 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0022381
HIT000022785
(
AK097931
)
Representative transcript
(Conserved hypothetical protein.)
genome : 52,904,077 - 52,905,893 (1,817)
query : 1 - 1,818 (1,818/1,818)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022381)
HIX0000586
HIT000600413 (
ENST00000497120
)
(PAP/25A-associated domain containing protein.)
genome : 52,911,937 - 52,927,762 (15,826)
query : 1 - 943 (943/943)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0000586
HIT000585497 (
ENST00000481528
)
(Conserved hypothetical protein.)
genome : 52,926,629 - 52,927,388 (760)
query : 1 - 471 (471/471)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, mito 15, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000586)
HIX0213784
HIT000057430
(
BX648783
)
Representative transcript
(PAP/25A-associated domain containing protein.)
genome : 52,927,867 - 52,991,602 (63,736)
query : 1 - 4,302 (4,302/4,319)
16 exons
identity = 0.999
3'(0.999;1.000;1.000;0.993;1.000;1.000;0.995;
1.000;1.000;1.000;0.981;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR002058 : PAP/25A-associated
IPR002934 : Nucleotidyl transferase domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000352821 (
ENST00000371541
)
(PAP/25A-associated domain containing protein.)
genome : 52,927,867 - 52,991,602 (63,736)
query : 1 - 4,302 (4,302/4,319)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000585116 (
ENST00000481133
)
(Nucleotidyl transferase domain containing protein.)
genome : 52,930,635 - 52,934,162 (3,528)
query : 1 - 521 (521/521)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, mito 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000094104
(
BC035820
)
(PAP/25A-associated domain containing protein.)
genome : 52,941,064 - 53,018,743 (77,680)
query : 12 - 2,412 (2,401/2,426)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR002058 : PAP/25A-associated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000087772
(
BC012047
)
(Conserved hypothetical protein.)
genome : 52,943,426 - 53,018,741 (75,316)
query : 1 - 2,030 (2,030/2,046)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000089699
(
BC018753
)
(Conserved hypothetical protein.)
genome : 52,943,426 - 53,018,741 (75,316)
query : 1 - 2,030 (2,030/2,046)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000578171 (
ENST00000473856
)
(Conserved hypothetical protein.)
genome : 52,943,410 - 53,018,741 (75,332)
query : 1 - 2,047 (2,047/2,047)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000020588
(
AK095733
)
(Conserved hypothetical protein.)
genome : 52,943,421 - 53,018,772 (75,352)
query : 1 - 2,245 (2,245/2,245)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0023815
HIT000049570
(
AK130299
)
Representative transcript
(UPF0764 protein C16orf89; Precursor;)
genome : 52,973,501 - 52,975,217 (1,717)
query : 1 - 1,716 (1,716/1,716)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 14, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023815)
HIX0213784
HIT000053322
(
BC048301
)
(Conserved hypothetical protein.)
genome : 52,980,467 - 53,018,666 (38,200)
query : 1 - 2,135 (2,135/2,162)
3 exons
identity = 1.000
3'(1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000309897 (
ENST00000355809
)
(Conserved hypothetical protein.)
genome : 52,980,467 - 53,018,666 (38,200)
query : 1 - 2,135 (2,135/2,152)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000575093 (
ENST00000470626
)
(Conserved hypothetical protein.)
genome : 52,991,692 - 53,018,757 (27,066)
query : 1 - 883 (883/883)
5 exons
identity = 0.992
3'(1.000;1.000;0.953;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 10, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0213784
HIT000623835 (
ENST00000524582
)
(Conserved hypothetical protein.)
genome : 52,991,722 - 53,019,159 (27,438)
query : 1 - 539 (539/539)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213784)
HIX0160539
HIT000520917 (
ENST00000422983
)
(Conserved hypothetical protein.)
genome : 53,038,786 - 53,039,488 (703)
query : 1 - 703 (703/703)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 12, cyto_nucl 8.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160539)
HIX0199859
HIT000205620 (
NM_015696
)
(Glutathione peroxidase 7; GPx-7; GSHPx-7; EC=1.11.1.9; CL683; Precursor;)
genome : 53,068,043 - 53,074,723 (6,681)
query : 1 - 1,229 (1,229/1,246)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0199859
HIT000010955
(
AK027683
)
Representative transcript
(Glutathione peroxidase 7; GPx-7; GSHPx-7; EC=1.11.1.9; CL683; Precursor;)
genome : 53,068,044 - 53,074,722 (6,679)
query : 2 - 1,228 (1,227/1,228)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
InterPro :
IPR000889 : Glutathione peroxidase
IPR012336 : Thioredoxin-like fold
IPR013376 : Glutathione peroxidase Gpx7, putative
GO :
0004602 : Molecular Function : glutathione peroxidase activity
0006979 : Biological Process : response to oxidative stress
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK165221
Danio
sp. (Zebrafish) : BC095737
Bos
sp. (Cow) : BC148128
Gallus
sp. (Chicken) : BX933973
Equus
sp. (Horse) : ENSECAT00000022315
Oryzias
sp. (Medaka) : ENSORLT00000016494
Pongo
sp. (Orangutan) : ENSPPYT00000001613
Tetraodon
sp. (Tetraodon) : GSTENT00003915001
Takifugu
sp. (Fugu) : SINFRUT00000142386
Rattus
sp. (Rat) : XM_001060175
Macaca
sp. (Macaque) : XM_001105729
Monodelphis
sp. (Opossum) : XM_001371668
Pan
sp. (Chimpanzee) : XM_524710
HIX0199859
HIT000314580 (
ENST00000361314
)
(Glutathione peroxidase 7; GPx-7; GSHPx-7; EC=1.11.1.9; CL683; Precursor;)
genome : 53,068,044 - 53,074,723 (6,680)
query : 1 - 1,228 (1,228/1,228)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0199859
HIT000077346
(
AF320068
)
(Glutathione peroxidase 7; GPx-7; GSHPx-7; EC=1.11.1.9; CL683; Precursor;)
genome : 53,068,044 - 53,074,717 (6,674)
query : 1 - 1,222 (1,222/1,222)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
InterPro :
IPR000889 : Glutathione peroxidase
IPR012336 : Thioredoxin-like fold
IPR013376 : Glutathione peroxidase Gpx7, putative
GO :
0004602 : Molecular Function : glutathione peroxidase activity
0006979 : Biological Process : response to oxidative stress
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0199859
HIT000252446
(
AY358402
)
(Glutathione peroxidase 7; GPx-7; GSHPx-7; EC=1.11.1.9; CL683; Precursor;)
genome : 53,068,060 - 53,074,723 (6,664)
query : 12 - 1,223 (1,212/1,227)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.988
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
InterPro :
IPR000889 : Glutathione peroxidase
IPR012336 : Thioredoxin-like fold
IPR013376 : Glutathione peroxidase Gpx7, putative
GO :
0004602 : Molecular Function : glutathione peroxidase activity
0006979 : Biological Process : response to oxidative stress
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0199859
HIT000041723
(
BC032788
)
(Glutathione peroxidase 7; GPx-7; GSHPx-7; EC=1.11.1.9; CL683; Precursor;)
genome : 53,068,070 - 53,074,592 (6,523)
query : 1 - 1,071 (1,071/1,129)
3 exons
identity = 0.998
5'(1.000;0.996;0.998)3'
coverage = 1.000
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
InterPro :
IPR000889 : Glutathione peroxidase
IPR012336 : Thioredoxin-like fold
IPR013376 : Glutathione peroxidase Gpx7, putative
GO :
0004602 : Molecular Function : glutathione peroxidase activity
0006979 : Biological Process : response to oxidative stress
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0199859
HIT000564738 (
ENST00000459779
)
(Glutathione peroxidase 7 precursor.)
genome : 53,068,072 - 53,073,080 (5,009)
query : 1 - 873 (873/873)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0199859
HIT000068313
(
AF091092
)
(Glutathione peroxidase 7 precursor.)
genome : 53,072,447 - 53,074,575 (2,129)
query : 10 - 822 (813/857)
2 exons
identity = 0.998
5'(0.994;0.998)3'
coverage = 0.999
EC number :
EC 1.11.1.9
KEGG pathway :
00480 : Glutathione metabolism (37)
00590 : Arachidonic acid metabolism (26)
InterPro :
IPR000889 : Glutathione peroxidase
IPR012336 : Thioredoxin-like fold
GO :
0004602 : Molecular Function : glutathione peroxidase activity
0006979 : Biological Process : response to oxidative stress
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 4, mito 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199859)
HIX0000587
HIT000048109
(
AK128236
)
(Membrane protein FAM159A;)
genome : 53,099,016 - 53,134,793 (35,778)
query : 1 - 1,468 (1,468/1,468)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, nucl 6, mito 4, plas 3, E.R._mito 3, extr 2,
E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0000587
HIT000538237 (
ENST00000440303
)
(Membrane protein FAM159A;)
genome : 53,099,016 - 53,134,793 (35,778)
query : 1 - 1,468 (1,468/1,468)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, nucl 6, mito 4, plas 3, E.R._mito 3, extr 2,
E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0000587
HIT000617261 (
ENST00000517870
)
(Membrane protein FAM159A;)
genome : 53,099,016 - 53,122,737 (23,722)
query : 1 - 748 (748/748)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, plas 6, cyto_mito 6, nucl 5, cyto_pero 5,
cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0000587
HIT000052571
(
BC041608
)
Representative transcript
(Membrane protein FAM159A;)
genome : 53,099,066 - 53,135,338 (36,273)
query : 1 - 1,976 (1,976/1,993)
6 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR026910 : Shisa family
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, nucl 6.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0000587
HIT000483918 (
ENST00000401050
)
(Membrane protein FAM159A;)
genome : 53,099,066 - 53,135,338 (36,273)
query : 1 - 1,975 (1,975/1,992)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0000587
HIT000397637 (
NM_001042693
)
(Membrane protein FAM159A;)
genome : 53,099,066 - 53,122,737 (23,672)
query : 1 - 698 (698/698)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, plas 6, cyto_mito 6, nucl 5, cyto_pero 5,
cyto_golg 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0000587
HIT000252665
(
AY358621
)
(Membrane protein FAM159A;)
genome : 53,099,242 - 53,122,739 (23,498)
query : 1 - 524 (524/526)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7, extr 6.5, extr_plas 6, nucl 5, plas 4.5,
mito 3.5, cyto_golg 3.5, E.R. 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000001612
Mus
sp. (Mouse) : NM_001099303
Rattus
sp. (Rat) : XM_001067092
Macaca
sp. (Macaque) : XM_001112028
Pan
sp. (Chimpanzee) : XM_001146642
Bos
sp. (Cow) : XM_001254545
Equus
sp. (Horse) : XM_001915785
Danio
sp. (Zebrafish) : XM_001919901
Canis
sp. (Dog) : XM_847063
HIX0000587
HIT000522098 (
ENST00000424164
)
(Membrane protein FAM159A;)
genome : 53,099,265 - 53,133,360 (34,096)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, extr_plas 8.5, extr 4.5, cyto 4, mito 4,
cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000587)
HIX0029084
HIT000006511
(
AK023237
)
Representative transcript
(Conserved hypothetical protein.)
genome : 53,150,123 - 53,153,412 (3,290)
query : 1 - 3,295 (3,295/3,295)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_nucl 13.3333, nucl 7, extr 5,
cyto_nucl 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029084)
HIX0000588
HIT000208992 (
NM_023077
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,152,014 - 53,164,038 (12,025)
query : 1 - 2,114 (2,114/2,114)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0000588
HIT000352818 (
ENST00000371538
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,152,508 - 53,164,038 (11,531)
query : 1 - 1,620 (1,620/1,620)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0000588
HIT000005775
(
AK022501
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,152,514 - 53,164,038 (11,525)
query : 1 - 1,614 (1,614/1,614)
3 exons
identity = 0.998
3'(0.998;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR006597 : Sel1-like
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0000588
HIT000384171
(
AK225041
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,152,523 - 53,164,012 (11,490)
query : 2 - 1,580 (1,579/1,580)
3 exons
identity = 0.999
3'(0.999;0.993;1.000)5'
coverage = 0.999
InterPro :
IPR006597 : Sel1-like
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0000588
HIT000384217
(
AK225087
)
Representative transcript
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,152,622 - 53,164,019 (11,398)
query : 1 - 1,487 (1,487/1,487)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006597 : Sel1-like
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK168902
Danio
sp. (Zebrafish) : BC115052
Gallus
sp. (Chicken) : BX929935
Tetraodon
sp. (Tetraodon) : CR695651
Monodelphis
sp. (Opossum) : ENSMODT00000000707
Oryzias
sp. (Medaka) : ENSORLT00000018344
Pongo
sp. (Orangutan) : ENSPPYT00000001611
Takifugu
sp. (Fugu) : SINFRUT00000138542
Rattus
sp. (Rat) : XM_001066987
Pan
sp. (Chimpanzee) : XM_001146832
Equus
sp. (Horse) : XM_001493560
Canis
sp. (Dog) : XM_539613
Bos
sp. (Cow) : XM_598765
HIX0000588
HIT000086574
(
BC005992
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,152,863 - 53,164,034 (11,172)
query : 1 - 1,261 (1,261/1,290)
3 exons
identity = 0.995
3'(0.995;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR006597 : Sel1-like
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0000588
HIT000037071
(
BC015313
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,153,143 - 53,164,004 (10,862)
query : 1 - 951 (951/999)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006597 : Sel1-like
IPR011990 : Tetratricopeptide-like helical domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0000588
HIT000590645 (
ENST00000486918
)
(Sel1 repeat-containing protein 1; Beta-lactamase hcp-like protein;)
genome : 53,153,234 - 53,163,740 (10,507)
query : 1 - 908 (908/908)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000588)
HIX0161346
HIT000548602 (
ENST00000450668
)
(NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5 family protein.)
genome : 53,174,794 - 53,175,114 (321)
query : 1 - 321 (321/321)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161346)
HIX0000589
HIT000468496
(
DQ646393
)
(Protein zyg-11 homolog B.)
genome : 53,192,139 - 53,282,311 (90,173)
query : 28 - 2,322 (2,295/2,336)
14 exons
identity = 0.997
5'(0.995;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.988
InterPro :
IPR001611 : Leucine-rich repeat
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000491084
(
AK296460
)
(Protein zyg-11 homolog B;)
genome : 53,192,126 - 53,287,401 (95,276)
query : 1 - 2,325 (2,325/2,325)
12 exons
identity = 0.996
5'(0.996;1.000;1.000;1.000;0.994;0.957;0.960;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000541690 (
ENST00000443756
)
(Protein zyg-11 homolog B;)
genome : 53,192,126 - 53,287,401 (95,276)
query : 1 - 2,325 (2,325/2,325)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000317582 (
NM_024646
)
(Protein zyg-11 homolog B;)
genome : 53,192,131 - 53,293,014 (100,884)
query : 1 - 8,143 (8,143/8,143)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 7.5, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000644177 (
ENST00000545132
)
(Protein zyg-11 homolog B.)
genome : 53,192,139 - 53,282,310 (90,172)
query : 1 - 2,294 (2,294/2,294)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000113830 (
ENST00000294353
)
(Protein zyg-11 homolog B;)
genome : 53,192,181 - 53,293,014 (100,834)
query : 1 - 8,093 (8,093/8,093)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 7.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000001446
(
AB051517
)
Representative transcript
(Protein zyg-11 homolog B;)
genome : 53,192,181 - 53,291,325 (99,145)
query : 1 - 6,404 (6,404/6,404)
14 exons
identity = 0.997
5'(0.994;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 7.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB047605
Mus
sp. (Mouse) : AK148335
Danio
sp. (Zebrafish) : BC115195
Bos
sp. (Cow) : BC151363
Equus
sp. (Horse) : ENSECAT00000011700
Oryzias
sp. (Medaka) : ENSORLT00000012750
Oryzias
sp. (Medaka) : ENSORLT00000018378
Pongo
sp. (Orangutan) : ENSPPYT00000001610
Tetraodon
sp. (Tetraodon) : GSTENT00020523001
Takifugu
sp. (Fugu) : SINFRUT00000129048
Takifugu
sp. (Fugu) : SINFRUT00000138538
Pan
sp. (Chimpanzee) : XM_001139134
Monodelphis
sp. (Opossum) : XM_001371474
Canis
sp. (Dog) : XM_539612
Danio
sp. (Zebrafish) : XM_690724
HIX0029174
HIT000088997
(
BC016458
)
Representative transcript
(Conserved hypothetical protein.)
genome : 53,208,517 - 53,209,075 (559)
query : 1 - 559 (559/582)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029174)
HIX0000589
HIT000020498
(
AK095643
)
(Protein zyg-11 homolog B.)
genome : 53,222,265 - 53,288,963 (66,699)
query : 1 - 3,732 (3,732/3,732)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;0.957;0.960;1.000;
1.000;1.000;1.000;1.000;0.990;0.998)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000056290
(
BX647643
)
(Protein zyg-11 homolog B.)
genome : 53,237,128 - 53,291,326 (54,199)
query : 1 - 5,635 (5,635/5,652)
12 exons
identity = 0.995
5'(0.994;1.000;0.994;0.957;0.960;1.000;1.000;
1.000;0.995;1.000;0.990;0.996)3'
coverage = 1.000
InterPro :
IPR004908 : ATPase, V1 complex, subunit H
IPR011989 : Armadillo-like helical
GO :
0000221 : Cellular Component : vacuolar proton-transporting V-type ATPase, V1 domain
0015991 : Biological Process : ATP hydrolysis coupled proton transport
0046961 : Molecular Function : proton-transporting ATPase activity, rotational mechanism
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000040894
(
BC029832
)
(Protein zyg-11 homolog B.)
genome : 53,237,287 - 53,287,740 (50,454)
query : 1 - 1,883 (1,883/1,930)
12 exons
identity = 0.996
5'(1.000;1.000;0.994;0.957;0.960;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, cysk 5, mito 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000013259
(
AK056645
)
(Protein zyg-11 homolog B.)
genome : 53,237,357 - 53,288,363 (51,007)
query : 1 - 2,436 (2,436/2,436)
12 exons
identity = 0.996
5'(1.000;1.000;0.994;0.957;0.960;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, cysk 5, mito 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0178049
HIT000626103_01 (
ENST00000526895
)
(Ribosomal protein S15 family protein.)
genome : 53,237,822 - 53,238,346 (525)
query : 40 - 561 (522/561)
1 exon
identity = 0.970
3'(0.970)5'
coverage = 0.930
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 6, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178049)
HIX0178049
HIT000104059_02 (
ENST00000228140
)
(Ribosomal protein S15 family protein.)
genome : 53,237,822 - 53,238,345 (524)
query : 1 - 491 (491/491)
2 exons
identity = 0.963
3'(0.985;0.956)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 11, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178049)
HIX0178049
HIT000535824 (
ENST00000437890
)
(Ribosomal protein S13/S15, N-terminal domain containing protein.)
genome : 53,237,866 - 53,238,320 (455)
query : 1 - 455 (455/455)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8, nucl 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178049)
HIX0178049
HIT000101258_03
(
D28429
)
Representative transcript
(Non-protein coding transcript.)
genome : 53,238,315 - 53,238,346 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178049)
HIX0000589
HIT000006792
(
AK023518
)
(Protein zyg-11 homolog B.)
genome : 53,262,409 - 53,288,304 (25,896)
query : 1 - 1,890 (1,890/1,890)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
0.997)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11, extr 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0000589
HIT000008330
(
AK025056
)
(Conserved hypothetical protein.)
genome : 53,290,943 - 53,293,008 (2,066)
query : 1 - 2,066 (2,066/2,082)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000589)
HIX0028675
HIT000251342
(
AY271826
)
Representative transcript
(Protein zyg-11 homolog B.)
genome : 53,308,183 - 53,360,666 (52,484)
query : 1 - 3,678 (3,678/3,698)
14 exons
identity = 0.994
5'(0.981;0.994;1.000;1.000;0.957;0.960;1.000;
0.994;1.000;1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 10.5, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028675)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC022150
Gallus
sp. (Chicken) : CR391669
Oryzias
sp. (Medaka) : ENSORLT00000018378
Pongo
sp. (Orangutan) : ENSPPYT00000001609
Pan
sp. (Chimpanzee) : ENSPTRT00000059193
Tetraodon
sp. (Tetraodon) : GSTENT00015025001
Tetraodon
sp. (Tetraodon) : GSTENT00020523001
Takifugu
sp. (Fugu) : SINFRUT00000180951
Rattus
sp. (Rat) : XM_001066935
Monodelphis
sp. (Opossum) : XM_001371362
Equus
sp. (Horse) : XM_001493421
Bos
sp. (Cow) : XM_600246
Danio
sp. (Zebrafish) : XM_690724
Canis
sp. (Dog) : XM_848286
Macaca
sp. (Macaque) : XR_014023
HIX0028675
HIT000352812 (
ENST00000371532
)
(Protein zyg-11 homolog B.)
genome : 53,308,183 - 53,360,670 (52,488)
query : 1 - 3,942 (3,942/3,942)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.957;0.960;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 10.5, cyto_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028675)
HIX0028675
HIT000315870 (
NM_001004339
)
(Protein zyg-11 homolog A;)
genome : 53,308,183 - 53,360,247 (52,065)
query : 1 - 4,271 (4,271/4,286)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 4, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028675)
HIX0028675
HIT000352808 (
ENST00000371528
)
(Protein zyg-11 homolog A;)
genome : 53,308,408 - 53,360,670 (52,263)
query : 1 - 4,469 (4,469/4,469)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.960;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028675)
HIX0028675
HIT000388102
(
BC119789
)
(Protein zyg-11 homolog A;)
genome : 53,308,609 - 53,359,877 (51,269)
query : 1 - 1,525 (1,525/1,525)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;0.957;0.918;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 5.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028675)
HIX0028675
HIT000388117
(
BC119815
)
(Protein zyg-11 homolog A;)
genome : 53,308,609 - 53,359,877 (51,269)
query : 1 - 1,375 (1,375/1,375)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, nucl 6.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028675)
HIX0028761
HIT000097504
(
BC043176
)
Representative transcript
(Conserved hypothetical protein.)
genome : 53,345,759 - 53,347,970 (2,212)
query : 1 - 2,209 (2,209/2,224)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028761)
HIX0028761
HIT000262396
(
BC066976
)
(Protein zyg-11 homolog A;)
genome : 53,345,759 - 53,347,970 (2,212)
query : 1 - 2,209 (2,209/2,224)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028761)
HIX0028761
HIT000544720 (
ENST00000446786
)
(Hypothetical short protein.)
genome : 53,346,888 - 53,347,402 (515)
query : 1 - 380 (380/380)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 14.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028761)
HIX0000590
HIT000055833
(
BX647186
)
(Conserved hypothetical protein.)
genome : 53,361,897 - 53,367,700 (5,804)
query : 14 - 5,813 (5,800/5,833)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9.5, cyto_mito 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000027786
(
AL832874
)
(Crotonase superfamily protein.)
genome : 53,361,904 - 53,370,499 (8,596)
query : 1 - 2,336 (2,336/2,360)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, cyto 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000075236
(
AF258590
)
(Enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform 2.)
genome : 53,361,904 - 53,372,139 (10,236)
query : 1 - 2,087 (2,087/2,104)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 10, cyto 9.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0214243
HIT000638725 (
ENST00000539680
)
(Conserved hypothetical protein.)
genome : 53,361,897 - 53,367,700 (5,804)
query : 1 - 5,804 (5,804/5,817)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214243)
HIX0000590
HIT000568696 (
ENST00000463923
)
(Crotonase superfamily protein.)
genome : 53,361,904 - 53,377,348 (15,445)
query : 1 - 663 (663/663)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 3, cyto 3, mito 3, cyto_nucl 3,
cyto_mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000642464 (
ENST00000543419
)
(Crontonase, C-terminal domain containing protein.)
genome : 53,361,904 - 53,377,327 (15,424)
query : 1 - 555 (555/555)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 11, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000583259 (
ENST00000479183
)
(Crotonase superfamily protein.)
genome : 53,361,904 - 53,370,519 (8,616)
query : 1 - 2,356 (2,356/2,356)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10.5, cyto 8.5, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000601763 (
ENST00000498544
)
(Crotonase superfamily protein.)
genome : 53,361,911 - 53,370,844 (8,934)
query : 1 - 985 (985/985)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 11, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000591551 (
ENST00000487866
)
(Crotonase superfamily protein.)
genome : 53,364,846 - 53,378,502 (13,657)
query : 1 - 940 (940/940)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, mito 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000589940 (
ENST00000486170
)
(Crotonase superfamily protein.)
genome : 53,370,317 - 53,372,773 (2,457)
query : 1 - 427 (427/427)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 5, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000426247
(
AK307381
)
(Crotonase superfamily protein.)
genome : 53,372,983 - 53,379,683 (6,701)
query : 1 - 812 (812/812)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, extr 7, nucl 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000591924 (
ENST00000488268
)
(Crotonase superfamily protein.)
genome : 53,372,984 - 53,387,204 (14,221)
query : 1 - 631 (631/631)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000643410 (
ENST00000544365
)
(Crotonase superfamily protein.)
genome : 53,373,120 - 53,392,884 (19,765)
query : 1 - 1,335 (1,335/1,335)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000429516
(
AK310650
)
Representative transcript
(Enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform 1.)
genome : 53,373,120 - 53,387,377 (14,258)
query : 1 - 1,017 (1,017/1,017)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000599268 (
ENST00000495920
)
(Crotonase superfamily protein.)
genome : 53,373,271 - 53,387,386 (14,116)
query : 1 - 456 (456/456)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 14, cyto 5.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000596452 (
ENST00000492992
)
(Crotonase superfamily protein.)
genome : 53,373,511 - 53,377,560 (4,050)
query : 1 - 370 (370/370)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 7, mito 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000643576 (
ENST00000544531
)
(Crotonase superfamily protein.)
genome : 53,377,236 - 53,387,258 (10,023)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, extr 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000584335 (
ENST00000480312
)
(Crotonase superfamily protein.)
genome : 53,377,236 - 53,387,187 (9,952)
query : 1 - 804 (804/804)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10, extr 7, mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000597315 (
ENST00000493896
)
(Conserved hypothetical protein.)
genome : 53,377,271 - 53,379,016 (1,746)
query : 1 - 714 (714/714)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11, mito 6, cyto 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000590761 (
ENST00000487040
)
(Conserved hypothetical protein.)
genome : 53,377,272 - 53,377,897 (626)
query : 1 - 557 (557/557)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000057169
(
BX648522
)
(Conserved hypothetical protein.)
genome : 53,378,402 - 53,380,548 (2,147)
query : 1 - 2,147 (2,147/2,169)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000428401
(
AK309535
)
(Conserved hypothetical protein.)
genome : 53,379,092 - 53,387,457 (8,366)
query : 1 - 982 (982/982)
3 exons
identity = 0.998
3'(1.000;1.000;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, extr_plas 6.5, extr 6, cyto_pero 6, plas 5,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000641597 (
ENST00000542552
)
(Conserved hypothetical protein.)
genome : 53,379,092 - 53,387,457 (8,366)
query : 1 - 981 (981/981)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 8.33333, nucl 7.5, mito 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0000590
HIT000579066 (
ENST00000474789
)
(Conserved hypothetical protein.)
genome : 53,379,392 - 53,387,393 (8,002)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000590)
HIX0160464
HIT000518509_01 (
ENST00000420575
)
(Translation machinery associated TMA7 family protein.)
genome : 53,386,094 - 53,386,268 (175)
query : 1 - 175 (175/175)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160464)
HIX0160931
HIT000534319 (
ENST00000436385
)
(Mitochondrial proteolipid family protein.)
genome : 53,390,921 - 53,391,095 (175)
query : 1 - 175 (175/175)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160931)
HIX0213921
HIT000316374 (
NM_001007098
)
(Thiolase, C-terminal domain containing protein.)
genome : 53,392,901 - 53,459,903 (67,003)
query : 1 - 2,091 (2,091/2,150)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, pero 8, E.R._mito 6, cyto_plas 6,
cyto_golg 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213921)
HIX0213921
HIT000262443
(
BC067108
)
Representative transcript
(Thiolase, C-terminal domain containing protein.)
genome : 53,392,990 - 53,459,903 (66,914)
query : 1 - 2,001 (2,001/2,060)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, pero 8, E.R._mito 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213921)
HIX0213921
HIT000352793 (
ENST00000371513
)
(Thiolase, C-terminal domain containing protein.)
genome : 53,392,990 - 53,459,904 (66,915)
query : 1 - 2,003 (2,003/2,003)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, pero 8, E.R._mito 6, cyto_plas 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213921)
HIX0213921
HIT000627980 (
ENST00000528809
)
(Thiolase, N-terminal domain containing protein.)
genome : 53,393,052 - 53,442,384 (49,333)
query : 1 - 570 (570/570)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, cyto_nucl 10, mito 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213921)
HIX0213921
HIT000628523 (
ENST00000529363
)
(Thiolase, N-terminal domain containing protein.)
genome : 53,407,475 - 53,444,047 (36,573)
query : 1 - 669 (669/671)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.987)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 19, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213921)
HIX0160668
HIT000525015 (
ENST00000427081
)
(Histone H3/CENP-A family protein.)
genome : 53,409,208 - 53,409,602 (395)
query : 1 - 395 (395/395)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160668)
HIX0213921
HIT000577908 (
ENST00000473584
)
(Thiolase, C-terminal domain containing protein.)
genome : 53,429,313 - 53,453,752 (24,440)
query : 1 - 582 (582/582)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 15.5, extr 2, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213921)
HIX0178182
HIT000655166_01 (
NM_001177314
)
(Small GTPase superfamily protein.)
genome : 53,457,454 - 53,459,375 (1,922)
query : 116 - 2,038 (1,923/2,054)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.943
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, extr 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000636805_01 (
ENST00000537760
)
(Small GTPase superfamily protein.)
genome : 53,457,458 - 53,459,375 (1,918)
query : 116 - 2,034 (1,919/2,034)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.943
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, extr 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000511957_02 (
ENST00000414023
)
(Small GTPase superfamily protein.)
genome : 53,457,496 - 53,459,376 (1,881)
query : 3 - 1,884 (1,882/1,884)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, extr 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000686855_01 (
ENST00000574530
)
(Small GTPase superfamily protein.)
genome : 53,457,496 - 53,459,376 (1,881)
query : 3 - 1,884 (1,882/1,884)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, extr 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000628400_01 (
ENST00000529237
)
(Small GTPase superfamily protein.)
genome : 53,458,214 - 53,459,375 (1,162)
query : 116 - 1,278 (1,163/1,278)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.910
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, extr 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000685021_01 (
ENST00000572397
)
(Small GTPase superfamily protein.)
genome : 53,458,214 - 53,459,375 (1,162)
query : 116 - 1,278 (1,163/1,278)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 0.910
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, extr 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000633792_01 (
ENST00000534746
)
(Small GTPase superfamily protein.)
genome : 53,458,470 - 53,459,377 (908)
query : 86 - 993 (908/993)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 0.914
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, extr 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000686281_01 (
ENST00000573870
)
(Small GTPase superfamily protein.)
genome : 53,458,470 - 53,459,377 (908)
query : 86 - 993 (908/993)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 0.914
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, extr 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000540108 (
ENST00000442174
)
(Small GTPase superfamily protein.)
genome : 53,458,868 - 53,459,251 (384)
query : 1 - 384 (384/384)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, extr 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000512102 (
ENST00000414168
)
(Small GTPase superfamily protein.)
genome : 53,458,873 - 53,459,374 (502)
query : 1 - 502 (502/502)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, mito 5, extr 4, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000630924_01 (
ENST00000531807
)
(Small GTPase superfamily protein.)
genome : 53,458,928 - 53,459,658 (731)
query : 1 - 732 (732/732)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto_nucl 8, cyto 7.5, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0178182
HIT000687326_01 (
ENST00000575077
)
(Small GTPase superfamily protein.)
genome : 53,458,928 - 53,459,658 (731)
query : 1 - 732 (732/732)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto_nucl 8, cyto 7.5, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0178182)
HIX0214157
HIT000525602 (
ENST00000427668
)
(Beta tubulin family protein.)
genome : 53,460,398 - 53,461,698 (1,301)
query : 1 - 1,301 (1,301/1,301)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214157)
HIX0203672
HIT000462690_02
(
DQ596159
)
Representative transcript
(Non-protein coding transcript.)
genome : 53,470,141 - 53,470,170 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203672)
HIX0203625
HIT000455367_05
(
DQ588836
)
Representative transcript
(Non-protein coding transcript.)
genome : 53,470,624 - 53,470,653 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203625)
HIX0213814
HIT000528264 (
ENST00000430330
)
(SCP2 sterol-binding domain containing protein.)
genome : 53,480,600 - 53,516,798 (36,199)
query : 1 - 938 (938/938)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.6667, cyto_plas 14.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000316375 (
NM_001007099
)
(SCP2 sterol-binding domain containing protein.)
genome : 53,480,610 - 53,517,289 (36,680)
query : 1 - 1,428 (1,428/1,428)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000316376 (
NM_001007100
)
(SCP2 sterol-binding domain containing protein.)
genome : 53,480,610 - 53,517,289 (36,680)
query : 1 - 1,419 (1,419/1,419)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.6667, cyto_plas 14.1667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000316413 (
NM_001007250
)
(Conserved hypothetical protein.)
genome : 53,480,610 - 53,517,289 (36,680)
query : 1 - 1,298 (1,298/1,298)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000506981 (
ENST00000408941
)
(Conserved hypothetical protein.)
genome : 53,480,610 - 53,517,289 (36,680)
query : 1 - 1,298 (1,298/1,298)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000215697
(
S52450
)
(Non-specific lipid-transfer protein isoform 3 proprotein.)
genome : 53,480,610 - 53,517,081 (36,472)
query : 1 - 1,220 (1,220/1,229)
5 exons
identity = 0.991
5'(1.000;1.000;0.985;0.988;0.990)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, mito 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000195785
(
M55421
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,480,610 - 53,517,081 (36,472)
query : 1 - 1,219 (1,219/1,219)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000032515
(
BC005911
)
Representative transcript
(Non-specific lipid-transfer protein isoform 5 proprotein.)
genome : 53,480,620 - 53,517,278 (36,659)
query : 1 - 1,407 (1,407/1,439)
5 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;0.999)3'
coverage = 0.998
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000632205 (
ENST00000533119
)
(SCP2 sterol-binding domain containing protein.)
genome : 53,480,638 - 53,516,734 (36,097)
query : 1 - 742 (742/742)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, cyto_nucl 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000587964 (
ENST00000484100
)
(Conserved hypothetical protein.)
genome : 53,480,638 - 53,516,690 (36,053)
query : 1 - 671 (671/671)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000582388 (
ENST00000478274
)
(SCP2 sterol-binding domain containing protein.)
genome : 53,480,638 - 53,514,187 (33,550)
query : 1 - 969 (969/969)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 9, cyto_pero 9, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000533279 (
ENST00000435345
)
(SCP2 sterol-binding domain containing protein.)
genome : 53,480,640 - 53,516,785 (36,146)
query : 1 - 894 (894/894)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000054403
(
BX537618
)
(Non-specific lipid-transfer protein isoform 3 proprotein.)
genome : 53,480,646 - 53,517,282 (36,637)
query : 2 - 3,927 (3,926/3,953)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000054404
(
BX537619
)
(Non-specific lipid-transfer protein isoform 3 proprotein.)
genome : 53,480,646 - 53,517,282 (36,637)
query : 2 - 3,927 (3,926/3,953)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000592583 (
ENST00000488965
)
(Conserved hypothetical protein.)
genome : 53,480,646 - 53,517,282 (36,637)
query : 1 - 3,926 (3,926/3,926)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0213814
HIT000498024
(
AK303400
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,480,649 - 53,514,187 (33,539)
query : 1 - 958 (958/958)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 10, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213814)
HIX0023743
HIT000046640
(
AK126767
)
Representative transcript
(Conserved hypothetical protein.)
genome : 53,481,076 - 53,484,412 (3,337)
query : 1 - 3,337 (3,337/3,337)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, plas 11, mito 2, E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023743)
HIX0199924
HIT000214429 (
NM_153703
)
(Podocan; Precursor;)
genome : 53,527,724 - 53,551,174 (23,451)
query : 1 - 3,171 (3,171/3,180)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 7.33333, nucl 7, cyto_mito 6.16667, pero 6,
cyto 5.5, mito 5.5, plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000656419 (
NM_001199082
)
(Podocan isoform 3.)
genome : 53,527,724 - 53,551,174 (23,451)
query : 1 - 2,745 (2,745/2,754)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto_nucl 6.83333, plas 6, pero 6,
cyto_mito 5.66667, mito 5.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000656417 (
NM_001199080
)
(Podocan; Precursor;)
genome : 53,527,724 - 53,551,174 (23,451)
query : 1 - 3,417 (3,417/3,417)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_mito 10.6667, plas 4.5, nucl 4,
mito 3.5, mito_pero 3.33333, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000252338
(
AY358294
)
(Podocan; Precursor;)
genome : 53,527,854 - 53,551,174 (23,321)
query : 1 - 3,287 (3,287/3,296)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997;0.989;1.000;1.000;
1.000;1.000;0.997;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_mito 10.6667, plas 4.5, nucl 4,
mito 3.5, mito_pero 3.33333, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000352780 (
ENST00000371500
)
(Podocan; Precursor;)
genome : 53,527,854 - 53,551,174 (23,321)
query : 1 - 3,287 (3,287/3,287)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_mito 10.6667, plas 4.5, nucl 4,
mito 3.5, mito_pero 3.33333, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000479235 (
ENST00000395871
)
(Podocan isoform 3.)
genome : 53,527,854 - 53,551,173 (23,320)
query : 1 - 2,614 (2,614/2,614)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto_nucl 6.83333, plas 6, pero 6,
cyto_mito 5.66667, mito 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000495471
(
AK300847
)
(Podocan isoform 2.)
genome : 53,527,881 - 53,550,568 (22,688)
query : 1 - 1,505 (1,505/1,505)
6 exons
identity = 0.989
5'(1.000;0.986;0.977;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000092169
(
BC030608
)
(Podocan; Precursor;)
genome : 53,527,885 - 53,551,164 (23,280)
query : 3 - 3,002 (3,000/3,020)
11 exons
identity = 0.998
5'(1.000;0.997;0.989;1.000;1.000;1.000;1.000;
0.997;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 7.33333, nucl 7, cyto_mito 6.16667, pero 6,
cyto 5.5, mito 5.5, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000656418 (
NM_001199081
)
(Podocan; Precursor;)
genome : 53,527,885 - 53,551,174 (23,290)
query : 1 - 3,066 (3,066/3,075)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_mito 10.6667, plas 4.5, nucl 4,
mito 3.5, mito_pero 3.33333, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000119428 (
ENST00000312553
)
(Podocan; Precursor;)
genome : 53,527,885 - 53,551,174 (23,290)
query : 1 - 3,010 (3,010/3,010)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 7.33333, nucl 7, cyto_mito 6.16667, pero 6,
cyto 5.5, mito 5.5, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000491273
(
AK296649
)
(Podocan; Precursor;)
genome : 53,527,885 - 53,551,165 (23,281)
query : 1 - 3,057 (3,057/3,057)
12 exons
identity = 0.999
5'(1.000;1.000;0.997;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_mito 10.6667, plas 4.5, nucl 4,
mito 3.5, mito_pero 3.33333, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000499223
(
AK304599
)
(Podocan; Precursor;)
genome : 53,527,885 - 53,550,738 (22,854)
query : 1 - 2,074 (2,074/2,074)
8 exons
identity = 0.995
5'(1.000;0.997;1.000;0.997;1.000;0.995;0.996;
0.974)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, cyto_nucl 6.83333, plas 6, pero 6,
cyto_mito 5.66667, mito 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000493999
(
AK299375
)
Representative transcript
(Podocan; Precursor;)
genome : 53,527,885 - 53,550,584 (22,700)
query : 1 - 2,666 (2,666/2,666)
13 exons
identity = 0.998
5'(0.990;1.000;1.000;0.997;0.989;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;0.998)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_mito 10.6667, plas 4.5, nucl 4,
mito 3.5, mito_pero 3.33333, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY313606
Bos
sp. (Cow) : ENSBTAT00000016614
Macaca
sp. (Macaque) : ENSMMUT00000047144
Oryzias
sp. (Medaka) : ENSORLT00000017878
Pongo
sp. (Orangutan) : ENSPPYT00000001606
Tetraodon
sp. (Tetraodon) : GSTENT00034564001
Gallus
sp. (Chicken) : L09231
Rattus
sp. (Rat) : M62763
Takifugu
sp. (Fugu) : SINFRUT00000157199
Monodelphis
sp. (Opossum) : XM_001371210
Equus
sp. (Horse) : XM_001493252
Pan
sp. (Chimpanzee) : XM_513413
Danio
sp. (Zebrafish) : XM_694610
Canis
sp. (Dog) : XM_861004
HIX0199924
HIT000251662
(
AY313607
)
(Podocan; Precursor;)
genome : 53,527,885 - 53,547,852 (19,968)
query : 1 - 2,012 (2,012/2,012)
10 exons
identity = 0.997
5'(1.000;0.997;0.989;1.000;1.000;1.000;1.000;
0.995;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 7.33333, nucl 7, cyto_mito 6.16667, pero 6,
cyto 5.5, mito 5.5, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000050942
(
BC028292
)
(Podocan; Precursor;)
genome : 53,527,901 - 53,551,166 (23,266)
query : 1 - 2,986 (2,986/3,001)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, plas 7, E.R. 4, cyto_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0161271
HIT000545801 (
ENST00000447867
)
(Non-protein coding transcript.)
genome : 53,535,610 - 53,551,174 (15,565)
query : 1 - 467 (467/467)
2 exons
identity = 0.985
3'(1.000;0.981)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161271)
HIX0199924
HIT000432962
(
AK314096
)
(Podocan isoform 2.)
genome : 53,535,641 - 53,547,833 (12,193)
query : 20 - 1,748 (1,729/1,748)
9 exons
identity = 0.998
5'(1.000;0.989;1.000;0.991;1.000;1.000;0.997;
1.000;1.000)3'
coverage = 0.989
InterPro :
IPR000372 : Leucine-rich repeat-containing N-terminal
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000024891
(
AL122104
)
(HIG1 domain family member 1A, mitochondrial isoform a.)
genome : 53,536,581 - 53,539,421 (2,841)
query : 1 - 1,537 (1,537/1,591)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, cyto 9.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000575650 (
ENST00000471210
)
(HIG1 domain family member 1A, mitochondrial isoform a.)
genome : 53,536,581 - 53,539,426 (2,846)
query : 1 - 1,542 (1,542/1,542)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, cyto 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0160985
HIT000536295 (
ENST00000438361
)
(Conserved hypothetical protein.)
genome : 53,538,782 - 53,539,061 (280)
query : 1 - 280 (280/280)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.83333, nucl 6, cyto 5.5,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160985)
HIX0199924
HIT000575725 (
ENST00000471285
)
(Podocan isoform 3.)
genome : 53,544,283 - 53,547,766 (3,484)
query : 1 - 710 (710/710)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 6.5, cyto_nucl 6.33333, cyto 3,
cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000594198 (
ENST00000490650
)
(Podocan isoform 3.)
genome : 53,544,322 - 53,547,860 (3,539)
query : 1 - 652 (652/652)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11, mito 10, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0199924
HIT000050873
(
BC024024
)
(Hypothetical protein.)
genome : 53,550,255 - 53,551,164 (910)
query : 4 - 913 (910/945)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.3333, extr 7, cyto 5,
cyto_pero 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199924)
HIX0213769
HIT000018782
(
AK093921
)
Representative transcript
(Excitatory amino acid transporter 4 isoform 2.)
genome : 53,552,856 - 53,556,654 (3,799)
query : 1 - 2,330 (2,330/2,330)
3 exons
identity = 0.998
3'(0.997;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27.5, extr_plas 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213769)
HIX0213769
HIT000591704 (
ENST00000488036
)
(Sodium:dicarboxylate symporter family protein.)
genome : 53,552,856 - 53,556,654 (3,799)
query : 1 - 2,330 (2,330/2,330)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213769)
HIX0213769
HIT000721941
(
JX162773
)
(Excitatory amino acid transporter 5.)
genome : 53,553,743 - 53,559,188 (5,446)
query : 1 - 880 (880/880)
6 exons
identity = 0.998
3'(1.000;0.990;1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213769)
HIX0213811
HIT000029806
(
BC000651
)
Representative transcript
(Sodium:dicarboxylate symporter family protein.)
genome : 53,573,600 - 53,608,289 (34,690)
query : 1 - 1,306 (1,306/1,341)
4 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, extr 8, E.R. 7, cysk_plas 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213811)
HIX0213811
HIT000352771 (
ENST00000371491
)
(Sodium:dicarboxylate symporter family protein.)
genome : 53,573,600 - 53,608,289 (34,690)
query : 1 - 1,306 (1,306/1,306)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, extr 8, E.R. 7, cysk_plas 7, cyto_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213811)
HIX0159667
HIT000018905
(
AK094048
)
Representative transcript
(Excitatory amino acid transporter 5.)
genome : 53,580,248 - 53,584,281 (4,034)
query : 1 - 1,871 (1,871/1,871)
2 exons
identity = 0.997
5'(0.997;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 8.5, E.R._mito 5.5, pero 3, plas 2,
lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159667)
HIX0159667
HIT000537555 (
ENST00000439621
)
(Excitatory amino acid transporter 5.)
genome : 53,580,248 - 53,584,281 (4,034)
query : 1 - 1,871 (1,871/1,871)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 8.5, E.R._mito 5.5, pero 3, plas 2,
lyso 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159667)
HIX0000594
HIT000197149 (
NM_000098
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,101 - 53,679,868 (17,768)
query : 1 - 3,093 (3,093/3,110)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000352766 (
ENST00000371486
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,101 - 53,679,869 (17,769)
query : 1 - 3,094 (3,094/3,094)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000217930
(
U09648
)
Representative transcript
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,101 - 53,679,867 (17,767)
query : 1 - 3,090 (3,090/3,090)
5 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
InterPro :
IPR000542 : Acyltransferase ChoActase/COT/CPT
GO :
0016746 : Molecular Function : transferase activity, transferring acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB125158
Mus
sp. (Mouse) : AK144441
Danio
sp. (Zebrafish) : BC085392
Bos
sp. (Cow) : BC105423
Equus
sp. (Horse) : ENSECAT00000023567
Monodelphis
sp. (Opossum) : ENSMODT00000025549
Oryzias
sp. (Medaka) : ENSORLT00000017137
Pongo
sp. (Orangutan) : ENSPPYT00000001604
Tetraodon
sp. (Tetraodon) : GSTENT00013741001
Rattus
sp. (Rat) : J05470
Takifugu
sp. (Fugu) : SINFRUT00000167256
Takifugu
sp. (Fugu) : SINFRUT00000167945
Pan
sp. (Chimpanzee) : XM_001148628
Monodelphis
sp. (Opossum) : XM_001370936
Canis
sp. (Dog) : XM_546705
HIX0000594
HIT000030898
(
BC002445
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,492 - 53,679,604 (17,113)
query : 1 - 2,438 (2,438/2,455)
5 exons
identity = 0.999
5'(1.000;1.000;0.991;0.999;0.999)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
InterPro :
IPR000542 : Acyltransferase ChoActase/COT/CPT
GO :
0016746 : Molecular Function : transferase activity, transferring acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000032263
(
BC005172
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,492 - 53,679,604 (17,113)
query : 1 - 2,438 (2,438/2,455)
5 exons
identity = 0.999
5'(1.000;1.000;0.991;0.999;0.999)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
InterPro :
IPR000542 : Acyltransferase ChoActase/COT/CPT
GO :
0016746 : Molecular Function : transferase activity, transferring acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000431553
(
AK312687
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,497 - 53,679,267 (16,771)
query : 1 - 2,096 (2,096/2,096)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
InterPro :
IPR000542 : Acyltransferase ChoActase/COT/CPT
GO :
0016746 : Molecular Function : transferase activity, transferring acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000195876
(
M58581
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,515 - 53,679,444 (16,930)
query : 1 - 2,254 (2,254/2,255)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
InterPro :
IPR000542 : Acyltransferase ChoActase/COT/CPT
GO :
0016746 : Molecular Function : transferase activity, transferring acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000573131 (
ENST00000468572
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,662,531 - 53,668,408 (5,878)
query : 1 - 732 (732/732)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000594
HIT000330832
(
AK223052
)
(Carnitine O-palmitoyltransferase 2, mitochondrial; EC=2.3.1.21; Carnitine palmitoyltransferase II; CPT II; Precursor;)
genome : 53,668,004 - 53,679,604 (11,601)
query : 1 - 2,072 (2,072/2,090)
3 exons
identity = 0.997
5'(1.000;0.998;0.996)3'
coverage = 1.000
EC number :
EC 2.3.1.21
KEGG pathway :
00071 : Fatty acid metabolism (28)
InterPro :
IPR000542 : Acyltransferase ChoActase/COT/CPT
GO :
0016746 : Molecular Function : transferase activity, transferring acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.3333, nucl 14, cyto 12.5, cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0161393
HIT000550400 (
ENST00000452466
)
(Conserved hypothetical protein.)
genome : 53,676,128 - 53,679,447 (3,320)
query : 1 - 524 (524/524)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161393)
HIX0000594
HIT000444449
(
DQ577918
)
(Non-protein coding transcript.)
genome : 53,676,320 - 53,676,349 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000594)
HIX0000595
HIT000035112
(
BC010908
)
Representative transcript
(UPF0587 protein C1orf123;)
genome : 53,679,771 - 53,686,289 (6,519)
query : 5 - 1,089 (1,085/1,123)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.992
InterPro :
IPR008584 : Protein of unknown function DUF866, eukaryotic
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 6.33333,
cyto_plas 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK003575
Rattus
sp. (Rat) : BC100100
Bos
sp. (Cow) : BC108240
Gallus
sp. (Chicken) : CR353799
Equus
sp. (Horse) : ENSECAT00000022824
Monodelphis
sp. (Opossum) : ENSMODT00000000573
Oryzias
sp. (Medaka) : ENSORLT00000013120
Pongo
sp. (Orangutan) : ENSPPYT00000001603
Tetraodon
sp. (Tetraodon) : GSTENT00013362001
Danio
sp. (Zebrafish) : NM_001128685
Macaca
sp. (Macaque) : XM_001112673
Pan
sp. (Chimpanzee) : XM_001138629
Canis
sp. (Dog) : XM_536703
HIX0000595
HIT000003062
(
AK000587
)
(UPF0587 protein C1orf123;)
genome : 53,679,773 - 53,686,289 (6,517)
query : 1 - 1,083 (1,083/1,118)
8 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.979)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 6.33333,
cyto_plas 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000206746 (
NM_017887
)
(UPF0587 protein C1orf123;)
genome : 53,679,773 - 53,686,289 (6,517)
query : 1 - 1,083 (1,083/1,118)
8 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.979)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 6.33333,
cyto_plas 6.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000113831 (
ENST00000294360
)
(UPF0587 protein C1orf123;)
genome : 53,679,771 - 53,686,289 (6,519)
query : 1 - 1,085 (1,085/1,085)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 6.33333,
cyto_plas 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000017601
(
AK092734
)
(UPF0587 protein C1orf123;)
genome : 53,679,809 - 53,685,592 (5,784)
query : 1 - 1,913 (1,913/1,913)
6 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;0.988;0.997)5'
coverage = 1.000
InterPro :
IPR008584 : Protein of unknown function DUF866, eukaryotic
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000587613 (
ENST00000483739
)
(UPF0587 protein C1orf123;)
genome : 53,679,809 - 53,685,592 (5,784)
query : 1 - 1,912 (1,912/1,912)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000574863 (
ENST00000470385
)
(UPF0587 protein C1orf123;)
genome : 53,680,047 - 53,686,264 (6,218)
query : 1 - 1,009 (1,009/1,009)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, extr 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000019226
(
AK094371
)
(UPF0587 protein C1orf123;)
genome : 53,680,146 - 53,684,032 (3,887)
query : 1 - 1,908 (1,908/1,908)
3 exons
identity = 0.999
3'(1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR008584 : Protein of unknown function DUF866, eukaryotic
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000582928 (
ENST00000478839
)
(UPF0587 protein C1orf123;)
genome : 53,680,146 - 53,684,032 (3,887)
query : 1 - 1,908 (1,908/1,908)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000352760 (
ENST00000371480
)
(UPF0587 protein C1orf123;)
genome : 53,680,291 - 53,686,278 (5,988)
query : 1 - 493 (493/493)
7 exons
identity = 0.992
3'(1.000;1.000;0.949;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 11, cyto_nucl 10, nucl 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000268096
(
CR457246
)
(UPF0587 protein C1orf123;)
genome : 53,680,335 - 53,686,017 (5,683)
query : 6 - 479 (474/483)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.981
InterPro :
IPR008584 : Protein of unknown function DUF866, eukaryotic
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 6.33333,
cyto_plas 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000593347 (
ENST00000489755
)
(UPF0587 protein C1orf123;)
genome : 53,682,458 - 53,684,699 (2,242)
query : 1 - 720 (720/720)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000578523 (
ENST00000474227
)
(Conserved hypothetical protein.)
genome : 53,685,207 - 53,686,272 (1,066)
query : 1 - 841 (841/841)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto_nucl 3.16667, mito_pero 3.16667,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0000595
HIT000714540 (
ENST00000602807
)
(UPF0587 protein C1orf123;)
genome : 53,685,759 - 53,686,248 (490)
query : 1 - 490 (490/490)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000595)
HIX0029362
HIT000098110
(
BC045672
)
Representative transcript
(Transposase, L1 family protein.)
genome : 53,686,335 - 53,689,923 (3,589)
query : 1 - 3,589 (3,589/3,604)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR004244 : Transposase, L1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.6667, cyto 11, nucl 10,
cyto_plas 7.33333, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029362)
HIX0214288
HIT000682795 (
ENST00000569869
)
(Conserved hypothetical protein.)
genome : 53,686,335 - 53,689,925 (3,591)
query : 1 - 3,591 (3,591/3,591)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214288)
HIX0199798
HIT000199267 (
NM_002370
)
(Protein mago nashi homolog;)
genome : 53,692,565 - 53,704,282 (11,718)
query : 1 - 755 (755/772)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000063316
(
AF035940
)
Representative transcript
(Protein mago nashi homolog;)
genome : 53,692,565 - 53,704,180 (11,616)
query : 6 - 658 (653/675)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
InterPro :
IPR004023 : Mago nashi protein
GO :
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179220
Mus
sp. (Mouse) : AF007862
Gallus
sp. (Chicken) : AF383945
Danio
sp. (Zebrafish) : BC093273
Bos
sp. (Cow) : BC103092
Rattus
sp. (Rat) : DQ359101
Monodelphis
sp. (Opossum) : ENSMODT00000000565
Pongo
sp. (Orangutan) : ENSPPYT00000001602
Pan
sp. (Chimpanzee) : ENSPTRT00000001419
Takifugu
sp. (Fugu) : SINFRUT00000142158
Equus
sp. (Horse) : XM_001489443
Canis
sp. (Dog) : XM_536702
HIX0199798
HIT000038317
(
BC018211
)
(Protein mago nashi homolog;)
genome : 53,692,606 - 53,704,194 (11,589)
query : 1 - 626 (626/677)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004023 : Mago nashi protein
GO :
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000352750 (
ENST00000371470
)
(Protein mago nashi homolog;)
genome : 53,692,564 - 53,704,282 (11,719)
query : 1 - 756 (756/756)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000067125
(
AF086246
)
(Protein mago nashi homolog 2.)
genome : 53,692,599 - 53,699,272 (6,674)
query : 1 - 360 (360/369)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004023 : Mago nashi protein
GO :
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, extr 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000001765
(
AF067173
)
(Protein mago nashi homolog;)
genome : 53,692,598 - 53,704,207 (11,610)
query : 2 - 648 (647/650)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000352746 (
ENST00000371466
)
(Protein mago nashi homolog;)
genome : 53,692,598 - 53,704,171 (11,574)
query : 1 - 500 (500/500)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000492519
(
AK297895
)
(Protein mago nashi homolog;)
genome : 53,692,600 - 53,704,199 (11,600)
query : 1 - 526 (526/526)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004023 : Mago nashi protein
GO :
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000599216 (
ENST00000495868
)
(Protein mago nashi homolog 2.)
genome : 53,692,603 - 53,699,611 (7,009)
query : 1 - 695 (695/695)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, extr 10, mito_pero 7.5, cyto 6.5,
cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000430979
(
AK312113
)
(Protein mago nashi homolog;)
genome : 53,692,717 - 53,704,218 (11,502)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004023 : Mago nashi protein
GO :
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23.5, cyto_pero 14.1667, cyto_nucl 13.3333,
pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0199798
HIT000567755 (
ENST00000462941
)
(Protein mago nashi homolog;)
genome : 53,698,794 - 53,704,180 (5,387)
query : 1 - 738 (738/738)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199798)
HIX0029236
HIT000093066
(
BC033363
)
Representative transcript
(Hypothetical short protein.)
genome : 53,704,282 - 53,708,455 (4,174)
query : 1 - 1,181 (1,181/1,208)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 8.5, extr 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029236)
HIX0029236
HIT000556085 (
ENST00000458151
)
(Conserved hypothetical protein.)
genome : 53,704,282 - 53,708,455 (4,174)
query : 1 - 1,181 (1,181/1,181)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 8.5, extr 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029236)
HIX0029236
HIT000725620 (
NR_038953
)
(Hypothetical short protein.)
genome : 53,704,282 - 53,708,455 (4,174)
query : 1 - 1,181 (1,181/1,181)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11.5, nucl 8.5, extr 7, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029236)
HIX0000597
HIT000201373 (
NM_004631
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,708,036 - 53,793,821 (85,786)
query : 1 - 7,783 (7,783/7,783)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, plas 11, extr_plas 9.5, extr 6, E.R._mito 6,
E.R._golg 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000206440 (
NM_017522
)
(Low-density lipoprotein receptor-related protein 8 isoform 3 precursor.)
genome : 53,708,036 - 53,793,821 (85,786)
query : 1 - 6,994 (6,994/6,994)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 18, plas 5.5, extr_plas 5.5, extr 4.5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000211269 (
NM_033300
)
(Low-density lipoprotein receptor-related protein 8 isoform 3 precursor.)
genome : 53,708,036 - 53,793,821 (85,786)
query : 1 - 7,273 (7,273/7,273)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, plas 9, extr_plas 7.5, extr 4, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000365585 (
NM_001018054
)
(Low-density lipoprotein receptor-related protein 8 isoform 4 precursor.)
genome : 53,708,036 - 53,793,821 (85,786)
query : 1 - 7,606 (7,606/7,606)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, extr 8.5, extr_plas 8, plas 6.5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000714676 (
ENST00000602943
)
(Conserved hypothetical protein.)
genome : 53,708,036 - 53,710,212 (2,177)
query : 1 - 2,177 (2,177/2,177)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, mito 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000086666
(
BC006443
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,711,217 - 53,724,042 (12,826)
query : 1 - 2,209 (2,209/2,230)
6 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7, nucl 6, mito 6, mito_nucl 6, plas 5.5,
extr_plas 4.5, mito_pero 4.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000101578
(
D50678
)
Representative transcript
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,711,217 - 53,793,686 (82,470)
query : 1 - 4,468 (4,468/4,468)
19 exons
identity = 0.996
3'(0.994;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.983;1.000;1.000;1.000;
0.992;1.000;1.000;0.992;0.996)5'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, plas 8.5, extr_plas 7.5, E.R._golg 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB220498
Bos
sp. (Cow) : AY364441
Mus
sp. (Mouse) : D85463
Monodelphis
sp. (Opossum) : ENSMODT00000039753
Pongo
sp. (Orangutan) : ENSPPYT00000001600
Oryzias
sp. (Medaka) : EU159461
Tetraodon
sp. (Tetraodon) : GSTENT00015012001
Takifugu
sp. (Fugu) : SINFRUT00000180166
Gallus
sp. (Chicken) : X97001
Rattus
sp. (Rat) : XM_001066578
Equus
sp. (Horse) : XM_001493031
Danio
sp. (Zebrafish) : XM_001920081
Pan
sp. (Chimpanzee) : XM_513416
Canis
sp. (Dog) : XM_546704
HIX0000597
HIT000117224 (
ENST00000306052
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,711,217 - 53,793,686 (82,470)
query : 1 - 4,467 (4,467/4,467)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, plas 11, extr_plas 9.5, extr 6, E.R._mito 6,
E.R._golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000628825 (
ENST00000529670
)
(Low-density lipoprotein receptor-related protein 8 isoform 4 precursor.)
genome : 53,711,421 - 53,722,995 (11,575)
query : 1 - 660 (660/660)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 6, nucl 4, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000099436
(
BC051836
)
(Low-density lipoprotein receptor-related protein 8 isoform 4 precursor.)
genome : 53,712,239 - 53,793,726 (81,488)
query : 1 - 3,308 (3,308/3,322)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.996)5'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 17, plas 7.5, extr_plas 5.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000352734 (
ENST00000371454
)
(Low-density lipoprotein receptor-related protein 8 isoform 4 precursor.)
genome : 53,712,239 - 53,793,726 (81,488)
query : 1 - 3,308 (3,308/3,322)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 12, extr 8.5, extr_plas 8, plas 6.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000308711 (
ENST00000354412
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,712,240 - 53,793,584 (81,345)
query : 1 - 2,553 (2,553/2,553)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 18, plas 5.5, extr_plas 5.5, extr 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000328043
(
Z75190
)
(Low-density lipoprotein receptor-related protein 8 isoform 3 precursor.)
genome : 53,712,240 - 53,793,584 (81,345)
query : 1 - 2,549 (2,549/2,549)
16 exons
identity = 0.995
3'(0.992;0.994;1.000;1.000;1.000;1.000;1.000;
0.996;0.983;0.992;0.992;1.000;1.000;1.000;
0.992;0.992)5'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000021337
(
AK096482
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,712,240 - 53,793,071 (80,832)
query : 1 - 2,671 (2,671/2,671)
16 exons
identity = 0.997
3'(0.996;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;0.994;1.000;1.000;1.000;1.000;
1.000;0.993)5'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR013032 : EGF-like, conserved site
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, plas 5, nucl 5, mito 4.5, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000570362 (
ENST00000465675
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,712,240 - 53,793,071 (80,832)
query : 1 - 2,670 (2,670/2,670)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, pero 5, E.R. 4, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000584083 (
ENST00000480045
)
(Low-density lipoprotein receptor-related protein 8 isoform 2 precursor.)
genome : 53,712,630 - 53,793,742 (81,113)
query : 1 - 3,231 (3,231/3,231)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000307473 (
ENST00000347547
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,712,690 - 53,793,584 (80,895)
query : 1 - 2,382 (2,382/2,382)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, plas 9, extr_plas 7.5, extr 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000042760
(
AK122887
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,716,437 - 53,734,270 (17,834)
query : 1 - 3,298 (3,298/3,298)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000033 : LDLR class B repeat
IPR000742 : Epidermal growth factor-like domain
IPR011042 : Six-bladed beta-propeller, TolB-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, mito 6, cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000564634 (
ENST00000459674
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,716,437 - 53,734,270 (17,834)
query : 1 - 3,300 (3,300/3,300)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 7, cyto 7, cyto_nucl 7, mito 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000565153 (
ENST00000460214
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,722,915 - 53,728,169 (5,255)
query : 1 - 775 (775/775)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000585402 (
ENST00000481431
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,726,136 - 53,732,261 (6,126)
query : 1 - 627 (627/627)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6.5, cyto_nucl 4.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0000597
HIT000579738 (
ENST00000475501
)
(Low-density lipoprotein receptor-related protein 8; LRP-8; Apolipoprotein E receptor 2; Precursor;)
genome : 53,729,841 - 53,741,335 (11,495)
query : 1 - 721 (721/721)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11, extr 8, nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0160820
HIT000530587 (
ENST00000432653
)
(Conserved hypothetical protein.)
genome : 53,733,607 - 53,734,273 (667)
query : 1 - 470 (470/470)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160820)
HIX0160495
HIT000519571 (
ENST00000421637
)
(Conserved hypothetical protein.)
genome : 53,753,696 - 53,755,378 (1,683)
query : 1 - 675 (675/675)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7.5, cyto_nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160495)
HIX0000597
HIT000599894 (
ENST00000496580
)
(Low-density lipoprotein receptor-related protein 8 isoform 3 precursor.)
genome : 53,755,004 - 53,793,489 (38,486)
query : 1 - 507 (507/507)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000597)
HIX0161340
HIT000548403 (
ENST00000450469
)
(Hypothetical short protein.)
genome : 53,757,463 - 53,757,810 (348)
query : 1 - 237 (237/237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9, extr 8, mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161340)
HIX0161240
HIT000544620 (
ENST00000446686
)
(Hypothetical short protein.)
genome : 53,770,208 - 53,773,134 (2,927)
query : 1 - 752 (752/752)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10.5, cyto_nucl 6.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161240)
HIX0029163
HIT000088300
(
BC014162
)
Representative transcript
(Hypothetical protein.)
genome : 53,771,129 - 53,774,157 (3,029)
query : 1 - 3,029 (3,029/3,046)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 13, cyto_nucl 11.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029163)
HIX0017663
HIT000022425
(
AK097571
)
Representative transcript
(Conserved hypothetical protein.)
genome : 53,793,905 - 53,804,985 (11,081)
query : 2 - 1,686 (1,685/1,686)
4 exons
identity = 0.995
5'(1.000;1.000;0.999;0.981)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, extr 5, extr_plas 4, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017663)
HIX0017663
HIT000542973 (
ENST00000445039
)
(Non-protein coding transcript.)
genome : 53,793,921 - 53,802,890 (8,970)
query : 1 - 326 (326/326)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017663)
HIX0160731
HIT000527033 (
ENST00000429099
)
(Hypothetical short protein.)
genome : 53,814,160 - 53,814,905 (746)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 11, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160731)
HIX0161324
HIT000547892 (
ENST00000449958
)
(Conserved hypothetical protein.)
genome : 53,832,355 - 53,833,917 (1,563)
query : 1 - 835 (835/850)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9.5, cyto_nucl 7.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161324)
HIX0000599
HIT000676895 (
ENST00000563752
)
(Hypothetical short protein.)
genome : 53,878,821 - 53,905,648 (26,828)
query : 1 - 460 (460/460)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000679497 (
ENST00000566461
)
(Hypothetical short protein.)
genome : 53,878,835 - 53,883,338 (4,504)
query : 1 - 369 (369/369)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000679148 (
ENST00000566100
)
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Precursor;)
genome : 53,902,708 - 53,905,238 (2,531)
query : 1 - 2,531 (2,531/2,531)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000022607
(
AK097753
)
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Precursor;)
genome : 53,903,211 - 53,905,238 (2,028)
query : 2 - 2,029 (2,028/2,029)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR018108 : Mitochondrial substrate/solute carrier
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000366980 (
NR_002314
)
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Solute carrier family 25 member 3; Precursor;)
genome : 53,904,043 - 53,905,693 (1,651)
query : 1 - 925 (925/925)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000389644
(
BC128116
)
Representative transcript
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Solute carrier family 25 member 3; Precursor;)
genome : 53,904,043 - 53,905,693 (1,651)
query : 1 - 925 (925/925)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018108 : Mitochondrial substrate/solute carrier
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR637472
Equus
sp. (Horse) : ENSECAT00000019973
Monodelphis
sp. (Opossum) : ENSMODT00000039762
Macaca
sp. (Macaque) : XR_013332
Pan
sp. (Chimpanzee) : XR_023137
HIX0000599
HIT000389645
(
BC128117
)
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Solute carrier family 25 member 3; Precursor;)
genome : 53,904,043 - 53,905,693 (1,651)
query : 1 - 925 (925/925)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018108 : Mitochondrial substrate/solute carrier
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000682090 (
ENST00000569142
)
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Solute carrier family 25 member 3; Precursor;)
genome : 53,904,043 - 53,905,693 (1,651)
query : 1 - 925 (925/925)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000541778 (
ENST00000443844
)
(Phosphate carrier protein, mitochondrial; Phosphate transport protein; PTP; Solute carrier family 25 member 3; Precursor;)
genome : 53,904,044 - 53,904,974 (931)
query : 1 - 931 (931/931)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000599
HIT000675881 (
ENST00000562700
)
(Conserved hypothetical protein.)
genome : 53,904,384 - 53,905,242 (859)
query : 1 - 481 (481/481)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 11, mito_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000599)
HIX0000600
HIT000352725 (
ENST00000371445
)
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,072 - 53,933,161 (8,090)
query : 1 - 1,910 (1,910/1,910)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 13, cyto_nucl 6, nucl 5.5,
cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
HIX0000600
HIT000013887
(
AK057273
)
Representative transcript
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,072 - 53,933,158 (8,087)
query : 1 - 1,907 (1,907/1,907)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001275 : DM DNA-binding domain
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 13, cyto_nucl 6, nucl 5.5,
cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK132787
Bos
sp. (Cow) : ENSBTAT00000011942
Gallus
sp. (Chicken) : ENSGALT00000017441
Pongo
sp. (Orangutan) : ENSPPYT00000001599
Rattus
sp. (Rat) : ENSRNOT00000031684
Takifugu
sp. (Fugu) : SINFRUT00000137558
Macaca
sp. (Macaque) : XM_001112973
Pan
sp. (Chimpanzee) : XM_001148838
Monodelphis
sp. (Opossum) : XM_001369421
Canis
sp. (Dog) : XM_848189
HIX0000600
HIT000211113 (
NM_033067
)
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,072 - 53,933,158 (8,087)
query : 1 - 1,907 (1,907/1,907)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 13, cyto_nucl 6, nucl 5.5,
cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
HIX0000600
HIT000246562
(
AJ291671
)
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,145 - 53,932,722 (7,578)
query : 1 - 1,398 (1,398/1,398)
4 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
HIX0000600
HIT000496709
(
AK302085
)
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,483 - 53,933,052 (7,570)
query : 1 - 1,340 (1,340/1,340)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.988;1.000)3'
coverage = 1.000
InterPro :
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 9.5, mito 9, cyto 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
HIX0000600
HIT000040827
(
BC029566
)
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,556 - 53,933,159 (7,604)
query : 1 - 1,424 (1,424/1,439)
4 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
HIX0000600
HIT000567935 (
ENST00000463126
)
(Doublesex- and mab-3-related transcription factor B1;)
genome : 53,925,649 - 53,930,352 (4,704)
query : 1 - 801 (801/801)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11.5, cyto_nucl 9.66667, cyto 6.5,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000600)
HIX0000601
HIT000015501
(
AK090634
)
Representative transcript
(Zinc finger protein GLIS1.)
genome : 53,971,906 - 54,199,877 (227,972)
query : 1 - 2,815 (2,815/2,815)
10 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000601)
HIX0000601
HIT000213413 (
NM_147193
)
(Zinc finger protein GLIS1.)
genome : 53,971,906 - 54,199,877 (227,972)
query : 1 - 2,816 (2,816/2,816)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000601)
HIX0000601
HIT000018341
(
AK093474
)
(Zinc finger protein GLIS1.)
genome : 53,971,906 - 54,060,511 (88,606)
query : 1 - 2,185 (2,185/2,185)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000601)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF486579
Gallus
sp. (Chicken) : CR390886
Oryzias
sp. (Medaka) : ENSORLT00000004836
Pongo
sp. (Orangutan) : ENSPPYT00000001598
Rattus
sp. (Rat) : ENSRNOT00000032433
Tetraodon
sp. (Tetraodon) : GSTENT00020210001
Takifugu
sp. (Fugu) : SINFRUT00000177548
Macaca
sp. (Macaque) : XM_001106844
Danio
sp. (Zebrafish) : XM_001340564
Equus
sp. (Horse) : XM_001915700
Canis
sp. (Dog) : XM_546702
Bos
sp. (Cow) : XM_615122
Pan
sp. (Chimpanzee) : XR_020189
HIX0000601
HIT000119311 (
ENST00000312233
)
(Zinc finger protein GLIS1.)
genome : 53,971,910 - 54,199,877 (227,968)
query : 1 - 2,812 (2,812/2,812)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000601)
HIX0000601
HIT000337999
(
BC104911
)
(Zinc finger protein GLIS1.)
genome : 53,972,218 - 54,060,648 (88,431)
query : 1 - 2,010 (2,010/2,010)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000601)
HIX0000601
HIT000386389
(
BC101799
)
(Zinc finger protein GLIS1.)
genome : 53,972,229 - 54,060,648 (88,420)
query : 1 - 1,999 (1,999/1,999)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000601)
HIX0117240
HIT000467490
(
DQ600959
)
Representative transcript
(Non-protein coding transcript.)
genome : 54,043,324 - 54,043,353 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117240)
HIX0117006
HIT000457938
(
DQ591407
)
Representative transcript
(Non-protein coding transcript.)
genome : 54,055,918 - 54,055,947 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0117006)
HIX0028984
HIT000066552
(
AF083122
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,061,035 - 54,061,516 (482)
query : 37 - 520 (484/520)
1 exon
identity = 0.963
3'(0.963)5'
coverage = 0.931
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028984)
HIX0000602
HIT000007842
(
AK024568
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,061,392 - 54,063,042 (1,651)
query : 1 - 1,646 (1,646/1,657)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11, extr 6, cyto 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000602)
HIX0000582
HIT000201531 (
NM_004799
)
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,607,766 - 52,812,358 (204,593)
query : 1 - 5,195 (5,195/5,210)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000203823 (
NM_007324
)
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,607,766 - 52,812,358 (204,593)
query : 1 - 5,018 (5,018/5,033)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000112892 (
ENST00000287727
)
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,608,046 - 52,812,357 (204,312)
query : 1 - 4,914 (4,914/4,914)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000070720
(
AF130419
)
(Conserved hypothetical protein.)
genome : 52,608,046 - 52,812,187 (204,142)
query : 1 - 4,565 (4,565/4,565)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000311082 (
ENST00000357206
)
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,608,046 - 52,812,187 (204,142)
query : 1 - 4,567 (4,567/4,567)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000352871 (
ENST00000371591
)
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,682,052 - 52,812,358 (130,307)
query : 1 - 4,874 (4,874/4,874)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000069418
(
AF104304
)
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,682,052 - 52,812,306 (130,255)
query : 1 - 4,823 (4,823/4,839)
18 exons
identity = 0.999
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR022557 : Domain of unknown function DUF3480
IPR024608 : Smad anchor for receptor activation, Smad-binding domain
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000582
HIT000041666
(
BC032680
)
Representative transcript
(Zinc finger FYVE domain-containing protein 9; Mothers against decapentaplegic homolog-interacting protein; Madh-interacting protein; Novel serine protease; NSP; Receptor activation anchor; hSARA; Smad anchor for receptor activation;)
genome : 52,698,876 - 52,812,358 (113,483)
query : 9 - 4,754 (4,746/4,769)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000306 : FYVE zinc finger
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR022557 : Domain of unknown function DUF3480
IPR024608 : Smad anchor for receptor activation, Smad-binding domain
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : DQ303413
Equus
sp. (Horse) : ENSECAT00000007946
Gallus
sp. (Chicken) : ENSGALT00000017269
Pongo
sp. (Orangutan) : ENSPPYT00000001620
Tetraodon
sp. (Tetraodon) : GSTENT00027659001
Danio
sp. (Zebrafish) : XM_001344468
Rattus
sp. (Rat) : XM_233341
Pan
sp. (Chimpanzee) : XM_513406
Canis
sp. (Dog) : XM_532576
Bos
sp. (Cow) : XM_863952
Macaca
sp. (Macaque) : XR_013956
HIX0000582
HIT000329060
(
AB209125
)
(Zinc finger FYVE domain-containing protein 9 isoform 1.)
genome : 52,703,364 - 52,812,305 (108,942)
query : 1 - 4,416 (4,416/4,416)
16 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000306 : FYVE zinc finger
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
IPR022557 : Domain of unknown function DUF3480
IPR024608 : Smad anchor for receptor activation, Smad-binding domain
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000582)
HIX0000585
HIT000210951 (
NM_032864
)
(Pre-mRNA-splicing factor 38A;)
genome : 52,870,219 - 52,883,992 (13,774)
query : 1 - 2,772 (2,772/2,780)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000107054 (
ENST00000257181
)
(Pre-mRNA-splicing factor 38A;)
genome : 52,870,236 - 52,883,992 (13,757)
query : 1 - 2,755 (2,755/2,755)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000016905
(
AK092038
)
Representative transcript
(Pre-mRNA-splicing factor 38A;)
genome : 52,870,236 - 52,883,850 (13,615)
query : 1 - 2,613 (2,613/2,613)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
IPR024767 : Pre-mRNA-splicing factor 38, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB097549
Mus
sp. (Mouse) : AK075925
Danio
sp. (Zebrafish) : BC075873
Bos
sp. (Cow) : BC119992
Gallus
sp. (Chicken) : BX934142
Pongo
sp. (Orangutan) : CR857982
Equus
sp. (Horse) : ENSECAT00000024335
Oryzias
sp. (Medaka) : ENSORLT00000016913
Tetraodon
sp. (Tetraodon) : GSTENT00010046001
Takifugu
sp. (Fugu) : SINFRUT00000157603
Rattus
sp. (Rat) : XM_001060413
Monodelphis
sp. (Opossum) : XM_001362072
Canis
sp. (Dog) : XM_532574
Macaca
sp. (Macaque) : XR_011481
HIX0000585
HIT000261109
(
BC063655
)
(Pre-mRNA-splicing factor 38A.)
genome : 52,870,243 - 52,882,693 (12,451)
query : 1 - 1,115 (1,115/1,130)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000590875 (
ENST00000487160
)
(Pre-mRNA-splicing factor 38A.)
genome : 52,870,292 - 52,874,746 (4,455)
query : 1 - 926 (926/926)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 10, cyto_nucl 10, nucl 5, mito 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000029912
(
BC000777
)
(Pre-mRNA-splicing factor 38A.)
genome : 52,870,300 - 52,882,694 (12,395)
query : 1 - 1,059 (1,059/1,098)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.999
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000578352 (
ENST00000474048
)
(Pre-mRNA-splicing factor 38A.)
genome : 52,870,300 - 52,882,694 (12,395)
query : 1 - 1,059 (1,059/1,059)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000338092
(
BC105004
)
(Pre-mRNA-splicing factor 38A;)
genome : 52,870,378 - 52,882,401 (12,024)
query : 1 - 1,022 (1,022/1,022)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
IPR024767 : Pre-mRNA-splicing factor 38, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0000585
HIT000338094
(
BC105006
)
(Pre-mRNA-splicing factor 38A;)
genome : 52,870,378 - 52,882,401 (12,024)
query : 1 - 1,022 (1,022/1,022)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005037 : Pre-mRNA-splicing factor 38
IPR024767 : Pre-mRNA-splicing factor 38, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000585)
HIX0214401
HIT000316660 (
NM_001009881
)
(Terminal uridylyltransferase 4; TUTase 4; EC=2.7.7.52; Zinc finger CCHC domain-containing protein 11;)
genome : 52,888,949 - 53,018,762 (129,814)
query : 1 - 5,849 (5,849/5,864)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000317245 (
NM_015269
)
(Terminal uridylyltransferase 4; TUTase 4; EC=2.7.7.52; Zinc finger CCHC domain-containing protein 11;)
genome : 52,888,949 - 53,018,762 (129,814)
query : 1 - 5,846 (5,846/5,856)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000352824 (
ENST00000371544
)
(Terminal uridylyltransferase 4; TUTase 4; EC=2.7.7.52; Zinc finger CCHC domain-containing protein 11;)
genome : 52,888,947 - 53,018,772 (129,826)
query : 1 - 5,858 (5,858/5,858)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000107053 (
ENST00000257177
)
(Terminal uridylyltransferase 4; TUTase 4; EC=2.7.7.52; Zinc finger CCHC domain-containing protein 11;)
genome : 52,888,947 - 53,018,654 (129,708)
query : 1 - 5,743 (5,743/5,743)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000042328
(
D83776
)
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,888,957 - 52,991,570 (102,614)
query : 1 - 5,203 (5,203/5,203)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR002058 : PAP/25A-associated
IPR002934 : Nucleotidyl transferase domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000390636
(
BC131734
)
Representative transcript
(Terminal uridylyltransferase 4; TUTase 4; EC=2.7.7.52; Zinc finger CCHC domain-containing protein 11;)
genome : 52,889,548 - 53,018,654 (129,107)
query : 1 - 5,142 (5,142/5,142)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR002058 : PAP/25A-associated
IPR002934 : Nucleotidyl transferase domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK220327
Gallus
sp. (Chicken) : CR390386
Pongo
sp. (Orangutan) : CR860282
Bos
sp. (Cow) : ENSBTAT00000003525
Monodelphis
sp. (Opossum) : ENSMODT00000000757
Oryzias
sp. (Medaka) : ENSORLT00000016466
Tetraodon
sp. (Tetraodon) : GSTENT00003914001
Takifugu
sp. (Fugu) : SINFRUT00000142376
Macaca
sp. (Macaque) : XM_001111807
Pan
sp. (Chimpanzee) : XM_001146040
Equus
sp. (Horse) : XM_001490450
Canis
sp. (Dog) : XM_532573
Danio
sp. (Zebrafish) : XM_695847
HIX0214401
HIT000044741
(
AK124868
)
(Terminal uridylyltransferase 4 isoform a.)
genome : 52,898,761 - 52,928,584 (29,824)
query : 1 - 3,756 (3,756/3,756)
3 exons
identity = 0.997
3'(0.998;0.999;0.991)5'
coverage = 1.000
EC number :
EC 2.7.7.52
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, extr 11, cyto 9, nucl 7.5,
cyto_pero 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000574312 (
ENST00000469810
)
(Terminal uridylyltransferase 4 isoform a.)
genome : 52,898,761 - 52,928,584 (29,824)
query : 1 - 3,757 (3,757/3,757)
3 exons
identity = 0.999
3'(1.000;1.000;0.991)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, extr 11, cyto 9, nucl 7.5,
cyto_pero 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000426445
(
AK307579
)
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,903,897 - 53,018,771 (114,875)
query : 1 - 4,195 (4,195/4,195)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR002058 : PAP/25A-associated
IPR002934 : Nucleotidyl transferase domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000627816 (
ENST00000528642
)
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,911,459 - 53,018,754 (107,296)
query : 1 - 3,854 (3,854/3,854)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000427293
(
AK308427
)
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,912,072 - 53,019,130 (107,059)
query : 1 - 2,908 (2,908/2,908)
21 exons
identity = 0.999
3'(1.000;0.987;0.978;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR002058 : PAP/25A-associated
IPR002934 : Nucleotidyl transferase domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
0016779 : Molecular Function : nucleotidyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214401
HIT000588560 (
ENST00000484723
)
(Terminal uridylyltransferase 4 isoform b.)
genome : 52,912,072 - 53,019,130 (107,059)
query : 1 - 2,910 (2,910/2,910)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.52
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214401)
HIX0214380
HIT000207101 (
NM_018281
)
(Crotonase superfamily protein.)
genome : 53,361,582 - 53,387,446 (25,865)
query : 1 - 1,497 (1,497/1,498)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000656375 (
NM_001198961
)
(Crotonase superfamily protein.)
genome : 53,361,582 - 53,387,446 (25,865)
query : 1 - 1,590 (1,590/1,591)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3, cyto 3, cyto_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000656376 (
NM_001198962
)
(Crotonase superfamily protein.)
genome : 53,361,582 - 53,387,446 (25,865)
query : 1 - 1,446 (1,446/1,447)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000352802 (
ENST00000371522
)
(Crotonase superfamily protein.)
genome : 53,361,656 - 53,387,439 (25,784)
query : 1 - 1,509 (1,509/1,509)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000099452
(
BC051887
)
(Crotonase superfamily protein.)
genome : 53,361,895 - 53,387,434 (25,540)
query : 1 - 2,645 (2,645/2,695)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 11, nucl 9.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000095187
(
BC038389
)
(Crotonase superfamily protein.)
genome : 53,361,904 - 53,387,375 (25,472)
query : 1 - 1,606 (1,606/1,660)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 4.5, cyto_nucl 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000052865
(
BC044574
)
(Crotonase superfamily protein.)
genome : 53,361,904 - 53,387,375 (25,472)
query : 2 - 1,198 (1,197/1,212)
10 exons
identity = 0.998
3'(1.000;1.000;0.980;1.000;1.000;1.000;0.989;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000565534 (
ENST00000460612
)
(Crotonase superfamily protein.)
genome : 53,361,895 - 53,387,434 (25,540)
query : 1 - 2,645 (2,645/2,645)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 11, nucl 9.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000352800 (
ENST00000371520
)
(Crotonase superfamily protein.)
genome : 53,361,904 - 53,387,375 (25,472)
query : 1 - 1,606 (1,606/1,606)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000004284
(
AK001810
)
(Conserved hypothetical protein.)
genome : 53,361,905 - 53,387,398 (25,494)
query : 1 - 1,126 (1,126/1,126)
9 exons
identity = 0.998
3'(1.000;1.000;0.980;1.000;1.000;1.000;0.989;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000312078 (
ENST00000358358
)
(Crotonase superfamily protein.)
genome : 53,361,905 - 53,387,398 (25,494)
query : 1 - 1,126 (1,126/1,126)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000096185
(
BC040480
)
(Crotonase superfamily protein.)
genome : 53,362,030 - 53,387,446 (25,417)
query : 1 - 4,265 (4,265/4,280)
11 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;0.982;1.000;0.991)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 10, cyto 9.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000496909
(
AK302285
)
Representative transcript
(Crotonase superfamily protein.)
genome : 53,362,075 - 53,392,851 (30,777)
query : 1 - 1,676 (1,676/1,676)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997;0.986)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000580669 (
ENST00000476477
)
(Crotonase superfamily protein.)
genome : 53,362,075 - 53,392,851 (30,777)
query : 1 - 1,676 (1,676/1,676)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000635165 (
ENST00000536120
)
(Crotonase superfamily protein.)
genome : 53,362,075 - 53,392,851 (30,777)
query : 1 - 1,676 (1,676/1,676)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000583649 (
ENST00000479593
)
(Crotonase superfamily protein.)
genome : 53,362,220 - 53,379,602 (17,383)
query : 1 - 766 (766/766)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000572574 (
ENST00000467988
)
(Crotonase superfamily protein.)
genome : 53,363,109 - 53,387,390 (24,282)
query : 1 - 702 (702/702)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000591537 (
ENST00000487851
)
(Crotonase superfamily protein.)
genome : 53,370,461 - 53,379,749 (9,289)
query : 1 - 471 (471/471)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000499519
(
AK315906
)
(Crotonase superfamily protein.)
genome : 53,371,693 - 53,387,376 (15,684)
query : 1 - 1,187 (1,187/1,187)
6 exons
identity = 0.999
3'(1.000;1.000;0.989;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000640326 (
ENST00000541281
)
(Crotonase superfamily protein.)
genome : 53,371,693 - 53,387,376 (15,684)
query : 1 - 1,187 (1,187/1,187)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000495520
(
AK300896
)
(Crotonase superfamily protein.)
genome : 53,371,835 - 53,387,214 (15,380)
query : 1 - 953 (953/953)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0214380
HIT000494458
(
AK299834
)
(Crotonase superfamily protein.)
genome : 53,372,020 - 53,387,258 (15,239)
query : 2 - 898 (897/898)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 0.999
InterPro :
IPR001753 : Crotonase superfamily
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214380)
HIX0000591
HIT000352794 (
ENST00000371514
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,901 - 53,517,375 (124,475)
query : 1 - 2,811 (2,811/2,811)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.16667, extr 8,
cyto_pero 7.33333, mito 7, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000199849 (
NM_002979
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,901 - 53,517,289 (124,389)
query : 1 - 2,725 (2,725/2,725)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.16667, extr 8,
cyto_pero 7.33333, mito 7, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000655903 (
NM_001193599
)
(Non-specific lipid-transfer protein isoform 7 proprotein.)
genome : 53,392,901 - 53,517,289 (124,389)
query : 1 - 2,653 (2,653/2,653)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_pero 8.5, extr 7, mito 6, E.R._mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000655904 (
NM_001193600
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,901 - 53,517,289 (124,389)
query : 1 - 2,593 (2,593/2,593)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, pero 10, cyto_pero 10, E.R._mito 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000655910 (
NM_001193617
)
(Non-specific lipid-transfer protein isoform 8 proprotein.)
genome : 53,392,901 - 53,517,289 (124,389)
query : 1 - 2,667 (2,667/2,667)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_pero 11.8333, cyto_nucl 9.66667,
mito 9, E.R._mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000328724
(
AB208789
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,949 - 53,517,073 (124,125)
query : 1 - 5,204 (5,204/5,204)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;0.999;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020615 : Thiolase, acyl-enzyme intermediate active site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.8333, cyto 3.5,
cyto_nucl 3.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000582728 (
ENST00000478631
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,949 - 53,517,073 (124,125)
query : 1 - 5,204 (5,204/5,204)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_mito 15.8333, cyto 3.5,
cyto_nucl 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000431722
(
AK312856
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,950 - 53,516,376 (123,427)
query : 1 - 1,763 (1,763/1,763)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020615 : Thiolase, acyl-enzyme intermediate active site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.16667, extr 8,
cyto_pero 7.33333, mito 7, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000489255
(
AK294631
)
(Non-specific lipid-transfer protein isoform 7 proprotein.)
genome : 53,392,958 - 53,516,932 (123,975)
query : 1 - 2,239 (2,239/2,239)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020615 : Thiolase, acyl-enzyme intermediate active site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_pero 9, extr 6, mito 6, E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000505902 (
ENST00000407246
)
(Non-specific lipid-transfer protein isoform 7 proprotein.)
genome : 53,392,958 - 53,516,932 (123,975)
query : 1 - 2,239 (2,239/2,239)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_pero 8.5, extr 7, mito 6, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000352789 (
ENST00000371509
)
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,392,958 - 53,516,642 (123,685)
query : 1 - 1,889 (1,889/1,889)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, pero 10, cyto_pero 10, E.R._mito 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000426971
(
AK308105
)
(Non-specific lipid-transfer protein isoform 5 proprotein.)
genome : 53,392,958 - 53,516,642 (123,685)
query : 1 - 1,888 (1,888/1,888)
15 exons
identity = 0.998
5'(1.000;1.000;0.986;0.985;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 19, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000489838
(
AK295214
)
(Non-specific lipid-transfer protein isoform 8 proprotein.)
genome : 53,392,958 - 53,516,575 (123,618)
query : 1 - 1,896 (1,896/1,896)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020615 : Thiolase, acyl-enzyme intermediate active site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_pero 11.8333, cyto_nucl 9.66667,
mito 9, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000627493 (
ENST00000528311
)
(Non-specific lipid-transfer protein isoform 8 proprotein.)
genome : 53,392,958 - 53,516,575 (123,618)
query : 1 - 1,896 (1,896/1,896)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_pero 11.8333, cyto_nucl 9.66667,
mito 9, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000591
HIT000196358
(
M75883
)
Representative transcript
(Non-specific lipid-transfer protein; NSL-TP; EC=2.3.1.176; Propanoyl-CoA C-acyltransferase; SCP-chi; SCPX; Sterol carrier protein 2; SCP-2; Sterol carrier protein X; SCP-X;)
genome : 53,393,048 - 53,517,282 (124,235)
query : 1 - 2,571 (2,571/2,572)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020615 : Thiolase, acyl-enzyme intermediate active site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.16667, extr 8,
cyto_pero 7.33333, mito 7, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC018384
Danio
sp. (Zebrafish) : BC063230
Bos
sp. (Cow) : BC103370
Tetraodon
sp. (Tetraodon) : CR648509
Pongo
sp. (Orangutan) : CR859768
Oryzias
sp. (Medaka) : ENSORLT00000013109
Gallus
sp. (Chicken) : L09231
Rattus
sp. (Rat) : M62763
Takifugu
sp. (Fugu) : SINFRUT00000135532
Macaca
sp. (Macaque) : XM_001106145
Monodelphis
sp. (Opossum) : XM_001371210
Equus
sp. (Horse) : XM_001493315
Pan
sp. (Chimpanzee) : XM_513413
Canis
sp. (Dog) : XM_861004
HIX0000591
HIT000196359
(
M75884
)
(Non-specific lipid-transfer protein isoform 5 proprotein.)
genome : 53,443,925 - 53,516,925 (73,001)
query : 16 - 1,500 (1,485/1,500)
8 exons
identity = 0.995
5'(0.974;0.986;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.990
EC number :
EC 2.3.1.176
KEGG pathway :
00120 : Primary bile acid biosynthesis (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR003033 : SCP2 sterol-binding domain
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020613 : Thiolase, conserved site
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 19, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000591)
HIX0000592
HIT000035673
(
BC012119
)
(Excitatory amino acid transporter 5; Retinal glutamate transporter; Solute carrier family 1 member 7;)
genome : 53,552,855 - 53,608,249 (55,395)
query : 1 - 2,637 (2,637/2,654)
11 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000037898
(
BC017242
)
(Excitatory amino acid transporter 5; Retinal glutamate transporter; Solute carrier family 1 member 7;)
genome : 53,552,855 - 53,608,249 (55,395)
query : 1 - 2,637 (2,637/2,654)
11 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000563862
(
AB593061
)
(Excitatory amino acid transporter 5.)
genome : 53,552,851 - 53,608,276 (55,426)
query : 1 - 2,471 (2,471/2,471)
10 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000203253 (
NM_006671
)
(Excitatory amino acid transporter 5; Retinal glutamate transporter; Solute carrier family 1 member 7;)
genome : 53,552,855 - 53,608,289 (55,435)
query : 1 - 2,677 (2,677/2,677)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000352774 (
ENST00000371494
)
(Excitatory amino acid transporter 5; Retinal glutamate transporter; Solute carrier family 1 member 7;)
genome : 53,552,855 - 53,608,249 (55,395)
query : 1 - 2,637 (2,637/2,637)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000563861
(
AB593060
)
Representative transcript
(Excitatory amino acid transporter 5.)
genome : 53,552,856 - 53,608,304 (55,449)
query : 1 - 2,663 (2,663/2,663)
11 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC030400
Macaca
sp. (Macaque) : DQ417740
Canis
sp. (Dog) : ENSCAFT00000030446
Equus
sp. (Horse) : ENSECAT00000024445
Oryzias
sp. (Medaka) : ENSORLT00000017901
Pongo
sp. (Orangutan) : ENSPPYT00000001605
Tetraodon
sp. (Tetraodon) : GSTENT00013364001
Takifugu
sp. (Fugu) : SINFRUT00000135542
Rattus
sp. (Rat) : XM_001066839
Danio
sp. (Zebrafish) : XM_001336321
Monodelphis
sp. (Opossum) : XM_001371137
Gallus
sp. (Chicken) : XM_426662
Pan
sp. (Chimpanzee) : XM_524714
Bos
sp. (Cow) : XM_601975
HIX0000592
HIT000563860
(
AB593059
)
(Excitatory amino acid transporter 5.)
genome : 53,552,856 - 53,608,293 (55,438)
query : 1 - 3,378 (3,378/3,378)
8 exons
identity = 0.999
3'(0.997;0.996;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, E.R. 8, extr 7, lyso 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000221286
(
U76362
)
(Excitatory amino acid transporter 5; Retinal glutamate transporter; Solute carrier family 1 member 7;)
genome : 53,553,556 - 53,608,299 (54,744)
query : 11 - 1,996 (1,986/1,996)
11 exons
identity = 0.990
3'(0.988;1.000;0.985;1.000;0.996;0.990;1.000;
1.000;1.000;0.975;0.971)5'
coverage = 0.995
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000592
HIT000715571
(
JF917096
)
(Excitatory amino acid transporter 5.)
genome : 53,553,681 - 53,608,121 (54,441)
query : 1 - 1,860 (1,860/1,860)
11 exons
identity = 0.998
3'(0.991;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001991 : Sodium:dicarboxylate symporter
IPR018107 : Sodium:dicarboxylate symporter, conserved site
GO :
0006835 : Biological Process : dicarboxylic acid transport
0016020 : Cellular Component : membrane
0017153 : Molecular Function : sodium:dicarboxylate symporter activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000592)
HIX0000583
eHIT000010743 ( ESTsASS_1_749 )
(Non-protein coding transcript.)
genome : 52,818,478 - 52,831,877 (13,400)
query : 1 - 3,129 (3,129/3,129)
25 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000583)
ESTs used for assembly :
C06235,BI160674,BM716989,CO394179
BG253461,CR984707,EC495203,BE888083
CV022916,CF785948,CN279194,DA254660
CV027039,BX337298,CN365575,BG766526
CX866810,BQ277673,DB458797,CN279193
BQ936413,CD516225,CN365574,BG482656
BG763659,BF808249,CN365576,CR977253
BG982546,DB213836,Z41996,BM849183
BQ073406,CR988452
AL445685.18
52500001-52541773 F +
NCBI
AL606761.8
52541774-52546433 F +
NCBI
AL139156.11
52546434-52685418 F +
NCBI
AC105754.3
52685419-52776870 F +
NCBI
AL513218.27
52776871-52882497 F +
NCBI
AL138849.12
52882498-53007504 F +
NCBI
AL591167.6
53007505-53063691 F +
NCBI
AL356976.30
53063692-53128014 F +
NCBI
AC099784.2
53128015-53289181 F -
NCBI
AL139255.9
53289182-53306822 F +
NCBI
AC099677.2
53306823-53421058 F +
NCBI
AL445183.19
53421059-53612832 F +
NCBI
AL606760.9
53612833-53731722 F +
NCBI
AL355483.14
53731723-53809977 F +
NCBI
AC119428.2
53809978-53854175 F -
NCBI
AL365445.11
53854176-53958612 F +
NCBI
AC105280.3
53958613-54029236 F +
NCBI
AL603915.4
54029237-54037699 F +
NCBI
AL591720.12
54037700-54100000 F +
NCBI