bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0022321
pHIT000072281 ( pHIT000072281 )
(Conserved hypothetical protein.)
genome : 99,127,222 - 99,225,687 (98,466)
query : 1 - 1,677 (1,677/1,677)
12 exons
InterPro :
IPR001683 : Phox homologous domain
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
CAGE tag :
H06BA52G0203
HIX0022321
HIT000205759 (
NM_015976
)
(Sorting nexin-7 family protein.)
genome : 99,127,236 - 99,226,055 (98,820)
query : 1 - 1,776 (1,776/1,792)
9 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000213525 (
NM_152238
)
(Sorting nexin-7 family protein.)
genome : 99,127,236 - 99,226,055 (98,820)
query : 1 - 1,611 (1,611/1,627)
8 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000658915 (
NR_033716
)
(Sorting nexin-7 family protein.)
genome : 99,127,236 - 99,226,055 (98,820)
query : 1 - 1,743 (1,743/1,759)
9 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000351469 (
ENST00000370189
)
(Sorting nexin-7 family protein.)
genome : 99,127,236 - 99,226,054 (98,819)
query : 1 - 1,742 (1,742/1,742)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000629144 (
ENST00000529992
)
(Sorting nexin-7 family protein.)
genome : 99,127,257 - 99,226,054 (98,798)
query : 1 - 1,589 (1,589/1,589)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000008305
(
AK025031
)
Representative transcript
(Sorting nexin-7;)
genome : 99,127,279 - 99,226,055 (98,777)
query : 1 - 1,733 (1,733/1,749)
9 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000117254 (
ENST00000306121
)
(Sorting nexin-7 family protein.)
genome : 99,127,279 - 99,226,056 (98,778)
query : 1 - 1,734 (1,734/1,734)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000578183 (
ENST00000473868
)
(Conserved hypothetical protein.)
genome : 99,127,366 - 99,142,887 (15,522)
query : 1 - 253 (253/253)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, extr 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000331009
(
AK223229
)
(Sorting nexin-7;)
genome : 99,127,377 - 99,226,051 (98,675)
query : 1 - 1,631 (1,631/1,631)
9 exons
identity = 0.998
5'(0.989;1.000;0.991;1.000;0.995;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000023891
(
AL049989
)
(Sorting nexin-7;)
genome : 99,127,383 - 99,226,055 (98,673)
query : 5 - 1,633 (1,629/1,649)
9 exons
identity = 0.996
5'(0.988;1.000;1.000;0.994;0.995;1.000;1.000;
0.993;0.996)3'
coverage = 0.998
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000492835
(
AK298211
)
(Sorting nexin-7;)
genome : 99,127,390 - 99,226,054 (98,665)
query : 1 - 1,456 (1,456/1,456)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995;0.990;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000070334
(
AF121857
)
(Sorting nexin-7;)
genome : 99,127,393 - 99,226,054 (98,662)
query : 1 - 1,618 (1,618/1,618)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000038267
(
BC018105
)
(Sorting nexin-7 isoform a.)
genome : 99,127,418 - 99,226,055 (98,638)
query : 1 - 1,561 (1,561/1,585)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000627995 (
ENST00000528824
)
(Sorting nexin-7 family protein.)
genome : 99,127,418 - 99,226,056 (98,639)
query : 1 - 1,562 (1,562/1,562)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000034888
(
BC010349
)
(Sorting nexin-7;)
genome : 99,127,425 - 99,226,053 (98,629)
query : 4 - 1,588 (1,585/1,618)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;0.995)3'
coverage = 0.997
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000425815
(
AK293018
)
(Sorting nexin-7;)
genome : 99,127,779 - 99,225,807 (98,029)
query : 1 - 1,456 (1,456/1,456)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000552133 (
ENST00000454199
)
(Sorting nexin-7 family protein.)
genome : 99,127,779 - 99,157,133 (29,355)
query : 1 - 497 (497/497)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0022321
HIT000099667
(
BT006747
)
(Sorting nexin-7 family protein.)
genome : 99,150,453 - 99,225,686 (75,234)
query : 1 - 1,010 (1,010/1,011)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.987)3'
coverage = 0.999
InterPro :
IPR001683 : Phox homologous domain
IPR028656 : Sorting nexin-7
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
HIX0203564
HIT000447370_07
(
DQ580839
)
Representative transcript
(Non-protein coding transcript.)
genome : 99,271,864 - 99,271,893 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203564)
HIX0028560
HIT000070788
(
AF131783
)
(Hypothetical short protein.)
genome : 99,355,809 - 99,357,327 (1,519)
query : 1 - 1,519 (1,519/1,537)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 11, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000365142 (
NM_001010861
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,355,802 - 99,470,449 (114,648)
query : 1 - 3,999 (3,999/4,008)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000366302 (
NM_001037317
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,355,802 - 99,470,449 (114,648)
query : 1 - 4,014 (4,014/4,023)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000096043
(
BC040174
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,355,809 - 99,470,181 (114,373)
query : 6 - 3,729 (3,724/3,745)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.999
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000351468 (
ENST00000370188
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,355,806 - 99,470,588 (114,783)
query : 1 - 4,134 (4,134/4,134)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000108776 (
ENST00000263177
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,356,528 - 99,470,449 (113,922)
query : 1 - 3,288 (3,288/3,288)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000500375
(
BC136350
)
Representative transcript
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,356,528 - 99,470,387 (113,860)
query : 1 - 3,211 (3,211/3,211)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.992;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK076176
Danio
sp. (Zebrafish) : BC142843
Gallus
sp. (Chicken) : BX931105
Bos
sp. (Cow) : ENSBTAT00000006027
Equus
sp. (Horse) : ENSECAT00000008219
Oryzias
sp. (Medaka) : ENSORLT00000020681
Pongo
sp. (Orangutan) : ENSPPYT00000001350
Tetraodon
sp. (Tetraodon) : GSTENT00009450001
Takifugu
sp. (Fugu) : SINFRUT00000128133
Rattus
sp. (Rat) : XM_001074140
Macaca
sp. (Macaque) : XM_001105460
Monodelphis
sp. (Opossum) : XM_001381810
Pan
sp. (Chimpanzee) : XM_513585
Canis
sp. (Dog) : XM_537060
HIX0028560
HIT000502439
(
BC144000
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,356,528 - 99,470,387 (113,860)
query : 1 - 3,223 (3,223/3,223)
6 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000331952
(
AY574039
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,357,928 - 99,470,404 (112,477)
query : 1 - 1,844 (1,844/1,844)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000332039
(
AY634620
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,357,928 - 99,470,282 (112,355)
query : 1 - 1,707 (1,707/1,707)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000558627
(
FJ472844
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,358,247 - 99,470,449 (112,203)
query : 1 - 1,569 (1,569/1,569)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0028560
HIT000490312
(
AK295688
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,358,448 - 99,470,187 (111,740)
query : 1 - 1,091 (1,091/1,091)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.-
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028680 : Lipid phosphate phosphatase-related protein type 5
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0029373
HIT000099369
(
BC051712
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,372,775 - 99,374,825 (2,051)
query : 1 - 2,051 (2,051/2,066)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029373)
HIX0028560
HIT000633701 (
ENST00000534652
)
(Hypothetical short protein.)
genome : 99,456,412 - 99,470,040 (13,629)
query : 1 - 467 (467/467)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028560)
HIX0000807
HIT000020399
(
AK095544
)
Representative transcript
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,469,832 - 99,614,408 (144,577)
query : 1 - 2,544 (2,544/2,544)
3 exons
identity = 0.997
5'(0.984;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000807)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000008927
HIX0000807
HIT000523047 (
ENST00000425113
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,469,832 - 99,614,408 (144,577)
query : 1 - 2,544 (2,544/2,544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 11, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000807)
HIX0000807
HIT000659097 (
NR_033940
)
(Lipid phosphate phosphatase-related protein type 5; EC=3.1.3.-; Phosphatidic acid phosphatase 2d; Plasticity-related gene 5 protein; PRG-5;)
genome : 99,469,832 - 99,614,408 (144,577)
query : 1 - 2,544 (2,544/2,544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 11, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000807)
HIX0161552
HIT000555441 (
ENST00000457507
)
(Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal domain containing protein.)
genome : 99,473,774 - 99,474,030 (257)
query : 1 - 257 (257/257)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161552)
HIX0000808
HIT000351465 (
ENST00000370185
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,509 - 99,775,146 (45,638)
query : 1 - 5,369 (5,369/5,369)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000243770
(
AF541281
)
Representative transcript
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,848 - 99,775,137 (45,290)
query : 8 - 5,028 (5,021/5,047)
7 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171775
Mus
sp. (Mouse) : AF541279
Rattus
sp. (Rat) : AF541280
Canis
sp. (Dog) : ENSCAFT00000031909
Equus
sp. (Horse) : ENSECAT00000005667
Oryzias
sp. (Medaka) : ENSORLT00000005576
Pongo
sp. (Orangutan) : ENSPPYT00000001349
Tetraodon
sp. (Tetraodon) : GSTENT00009449001
Takifugu
sp. (Fugu) : SINFRUT00000134411
Takifugu
sp. (Fugu) : SINFRUT00000160150
Monodelphis
sp. (Opossum) : XM_001381816
Danio
sp. (Zebrafish) : XM_001921913
Pan
sp. (Chimpanzee) : XM_524774
Danio
sp. (Zebrafish) : XM_695340
Bos
sp. (Cow) : XR_028558
HIX0000808
HIT000654295 (
NM_001166252
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,848 - 99,775,137 (45,290)
query : 1 - 4,847 (4,847/4,867)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000317153 (
NM_014839
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,848 - 99,775,137 (45,290)
query : 1 - 5,021 (5,021/5,040)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000555699 (
ENST00000457765
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,848 - 99,775,136 (45,289)
query : 1 - 4,846 (4,846/4,846)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000000172
(
AB007924
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,852 - 99,775,136 (45,285)
query : 1 - 5,014 (5,014/5,014)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000251563
(
AY304518
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,729,900 - 99,775,136 (45,237)
query : 1 - 4,968 (4,968/4,968)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000097436
(
BC042963
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,730,036 - 99,775,137 (45,102)
query : 7 - 4,839 (4,833/4,854)
7 exons
identity = 0.999
5'(1.000;0.995;1.000;0.995;1.000;1.000;0.999)3'
coverage = 0.999
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000424166
(
AK291369
)
(Lipid phosphate phosphatase-related protein type 4 isoform 2.)
genome : 99,730,048 - 99,772,760 (42,713)
query : 1 - 2,444 (2,444/2,444)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000492041
(
AK297417
)
(Lipid phosphate phosphatase-related protein type 4 isoform 2.)
genome : 99,730,051 - 99,772,406 (42,356)
query : 1 - 1,915 (1,915/2,015)
6 exons
identity = 0.995
5'(1.000;0.995;1.000;1.000;1.000;0.992)3'
coverage = 0.950
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000078300
(
AF357013
)
(Lipid phosphate phosphatase-related protein type 4 isoform 2.)
genome : 99,730,075 - 99,775,137 (45,063)
query : 1 - 4,794 (4,794/4,813)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000494985
(
AK300361
)
(Lipid phosphate phosphatase-related protein type 4 isoform 2.)
genome : 99,730,104 - 99,772,959 (42,856)
query : 1 - 2,413 (2,413/2,413)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000029120
(
AL834390
)
(Lipid phosphate phosphatase-related protein type 4 isoform 2.)
genome : 99,753,628 - 99,775,137 (21,510)
query : 1 - 4,534 (4,534/4,554)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028684 : Lipid phosphate phosphatase-related protein type 4
GO :
0003824 : Molecular Function : catalytic activity
0005887 : Cellular Component : integral component of plasma membrane
0007409 : Biological Process : axonogenesis
0016020 : Cellular Component : membrane
0042577 : Molecular Function : lipid phosphatase activity
0046839 : Biological Process : phospholipid dephosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000351464 (
ENST00000370184
)
(Lipid phosphate phosphatase-related protein type 4; EC=3.1.3.4; Brain-specific phosphatidic acid phosphatase-like protein 1; Plasticity-related gene 1 protein; PRG-1;)
genome : 99,764,420 - 99,775,146 (10,727)
query : 1 - 4,505 (4,505/4,505)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0000808
HIT000096660
(
BC041386
)
(Lipid phosphate phosphatase-related protein type 4 isoform 2.)
genome : 99,772,216 - 99,775,137 (2,922)
query : 6 - 2,926 (2,921/2,941)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.998
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 7.5, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000808)
HIX0160831
HIT000530857 (
ENST00000432923
)
(Protein of unknown function DUF866, eukaryotic family protein.)
genome : 99,929,934 - 99,930,332 (399)
query : 1 - 399 (399/399)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, cyto 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160831)
HIX0161005
HIT000536763 (
ENST00000438829
)
(Hypothetical short protein.)
genome : 99,937,918 - 99,999,571 (61,654)
query : 1 - 495 (495/495)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161005)
HIX0000809
HIT000206606 (
NM_017734
)
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,431 - 100,160,097 (48,667)
query : 1 - 2,578 (2,578/2,601)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000108775 (
ENST00000263174
)
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,499 - 100,160,097 (48,599)
query : 1 - 2,510 (2,510/2,510)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000075460
(
AF262379
)
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,501 - 100,160,096 (48,596)
query : 2 - 2,508 (2,507/2,526)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000250624
(
AL390971
)
(Palmdelphin.)
genome : 100,111,501 - 100,152,722 (41,222)
query : 1 - 864 (864/878)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000247108
(
AJ312214
)
Representative transcript
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,598 - 100,160,259 (48,662)
query : 10 - 2,581 (2,572/2,581)
8 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.972)3'
coverage = 0.997
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173322
Mus
sp. (Mouse) : AK014531
Rattus
sp. (Rat) : BC098755
Bos
sp. (Cow) : BC105234
Danio
sp. (Zebrafish) : BC115257
Gallus
sp. (Chicken) : BX932560
Danio
sp. (Zebrafish) : ENSDART00000046091
Equus
sp. (Horse) : ENSECAT00000001448
Pongo
sp. (Orangutan) : ENSPPYT00000001348
Takifugu
sp. (Fugu) : SINFRUT00000173985
Pan
sp. (Chimpanzee) : XM_001158725
Monodelphis
sp. (Opossum) : XM_001381819
Canis
sp. (Dog) : XM_537059
HIX0000809
HIT000035878
(
BC012570
)
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,620 - 100,159,925 (48,306)
query : 5 - 2,221 (2,217/2,250)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000002753
(
AK000278
)
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,669 - 100,159,930 (48,262)
query : 1 - 2,170 (2,170/2,197)
8 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998;
0.983)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000250626
(
AL390973
)
(Palmdelphin; Paralemnin-like protein;)
genome : 100,111,705 - 100,159,930 (48,226)
query : 1 - 2,137 (2,137/2,155)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000250625
(
AL390972
)
(Palmdelphin.)
genome : 100,111,898 - 100,159,930 (48,033)
query : 1 - 1,850 (1,850/1,871)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000259875
(
BC058838
)
(Palmdelphin.)
genome : 100,133,136 - 100,135,362 (2,227)
query : 4 - 2,230 (2,227/2,255)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 16, nucl 11, cyto_plas 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000600148 (
ENST00000496843
)
(Palmdelphin.)
genome : 100,148,822 - 100,160,097 (11,276)
query : 1 - 5,294 (5,294/5,294)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000056860
(
BX648213
)
(Palmdelphin.)
genome : 100,148,822 - 100,159,936 (11,115)
query : 1 - 5,133 (5,133/5,173)
5 exons
identity = 0.996
5'(0.995;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000007928
(
AK024654
)
(Palmdelphin.)
genome : 100,154,329 - 100,159,933 (5,605)
query : 19 - 1,477 (1,459/1,497)
2 exons
identity = 0.998
5'(0.997;1.000)3'
coverage = 0.987
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000250623
(
AL390970
)
(Palmdelphin.)
genome : 100,154,345 - 100,160,097 (5,753)
query : 1 - 1,607 (1,607/1,630)
2 exons
identity = 0.999
5'(0.999;0.998)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0000809
HIT000250622
(
AL390969
)
(Palmdelphin.)
genome : 100,154,569 - 100,159,930 (5,362)
query : 1 - 1,215 (1,215/1,232)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000809)
HIX0160880
HIT000532668 (
ENST00000434734
)
(High mobility group box domain containing protein.)
genome : 100,163,798 - 100,164,734 (937)
query : 1 - 572 (572/572)
2 exons
identity = 0.995
5'(1.000;0.982)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160880)
HIX0028651
HIT000249590
(
AK131302
)
Representative transcript
(Ferric-chelate reductase 1 precursor.)
genome : 100,174,259 - 100,231,349 (57,091)
query : 1 - 2,678 (2,678/2,678)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR002861 : Reeler domain
IPR005018 : DOMON domain
IPR006593 : Cytochrome b561/ferric reductase transmembrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK167289
Bos
sp. (Cow) : BC133504
Canis
sp. (Dog) : ENSCAFT00000031906
Pongo
sp. (Orangutan) : ENSPPYT00000001347
Rattus
sp. (Rat) : ENSRNOT00000021988
Tetraodon
sp. (Tetraodon) : GSTENT00033682001
Takifugu
sp. (Fugu) : SINFRUT00000160154
Monodelphis
sp. (Opossum) : XM_001381821
Equus
sp. (Horse) : XM_001490081
Danio
sp. (Zebrafish) : XM_001921882
Gallus
sp. (Chicken) : XM_426638
Pan
sp. (Chimpanzee) : XM_524776
Danio
sp. (Zebrafish) : XM_681052
Macaca
sp. (Macaque) : XR_013249
HIX0028651
HIT000365290 (
NM_001013660
)
(Ferric-chelate reductase 1; EC=1.-.-.-; Stromal cell-derived receptor 2; SDR-2;)
genome : 100,174,259 - 100,231,349 (57,091)
query : 1 - 2,678 (2,678/2,678)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0028651
HIT000512147 (
ENST00000414213
)
(Ferric-chelate reductase 1; EC=1.-.-.-; Stromal cell-derived receptor 2; SDR-2;)
genome : 100,174,259 - 100,231,349 (57,091)
query : 1 - 2,706 (2,706/2,706)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0028651
HIT000112854 (
ENST00000287474
)
(Ferric-chelate reductase 1; EC=1.-.-.-; Stromal cell-derived receptor 2; SDR-2;)
genome : 100,174,295 - 100,231,349 (57,055)
query : 1 - 2,642 (2,642/2,642)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0028651
HIT000592822 (
ENST00000489209
)
(Ferric-chelate reductase 1; EC=1.-.-.-; Stromal cell-derived receptor 2; SDR-2;)
genome : 100,176,381 - 100,183,049 (6,669)
query : 1 - 394 (394/394)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 6, E.R._mito 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0028651
HIT000596404 (
ENST00000492943
)
(Ferric-chelate reductase 1; EC=1.-.-.-; Stromal cell-derived receptor 2; SDR-2;)
genome : 100,176,475 - 100,181,215 (4,741)
query : 1 - 440 (440/440)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0028651
HIT000091799
(
BC029438
)
(Ferric-chelate reductase 1 precursor.)
genome : 100,213,156 - 100,214,558 (1,403)
query : 1 - 1,275 (1,275/1,304)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0028651
HIT000351456 (
ENST00000370176
)
(Ferric-chelate reductase 1 precursor.)
genome : 100,213,151 - 100,232,187 (19,037)
query : 1 - 1,304 (1,304/1,304)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028651)
HIX0160226
HIT000509981 (
ENST00000412047
)
(Ribosomal protein L39e family protein.)
genome : 100,308,166 - 100,308,317 (152)
query : 1 - 152 (152/152)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 7, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160226)
HIX0023609
HIT000197670 (
NM_000642
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,315,640 - 100,389,579 (73,940)
query : 1 - 7,371 (7,371/7,371)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000221848
(
U84007
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,315,640 - 100,389,576 (73,937)
query : 1 - 7,366 (7,366/7,367)
34 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000315166 (
ENST00000361915
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,315,640 - 100,389,576 (73,937)
query : 1 - 7,368 (7,368/7,368)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000660480
(
AB621804
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,315,692 - 100,376,355 (60,664)
query : 1 - 4,136 (4,136/4,136)
28 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.8333, cyto_plas 9.83333,
nucl 7.5, pero 2, plas 1.5, mito_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000265750
(
BC078663
)
Representative transcript
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,315,920 - 100,387,509 (71,590)
query : 1 - 5,021 (5,021/5,048)
34 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK041661
Gallus
sp. (Chicken) : BX936061
Canis
sp. (Dog) : DQ307574
Equus
sp. (Horse) : EF660739
Monodelphis
sp. (Opossum) : ENSMODT00000004796
Oryzias
sp. (Medaka) : ENSORLT00000006844
Pongo
sp. (Orangutan) : ENSPPYT00000001346
Takifugu
sp. (Fugu) : SINFRUT00000160157
Rattus
sp. (Rat) : XM_001073642
Macaca
sp. (Macaque) : XM_001106354
Pan
sp. (Chimpanzee) : XM_001159258
Danio
sp. (Zebrafish) : XM_691102
HIX0023609
HIT000197080 (
NM_000028
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,579 (73,535)
query : 1 - 7,449 (7,449/7,449)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000197671 (
NM_000643
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,579 (73,535)
query : 1 - 7,169 (7,169/7,169)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000197672 (
NM_000644
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,579 (73,535)
query : 1 - 7,109 (7,109/7,109)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000221849
(
U84008
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,576 (73,532)
query : 1 - 7,104 (7,104/7,105)
34 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000221850
(
U84009
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,576 (73,532)
query : 1 - 7,164 (7,164/7,165)
34 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000221851
(
U84010
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,576 (73,532)
query : 1 - 7,444 (7,444/7,445)
34 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000113939 (
ENST00000294724
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,576 (73,532)
query : 1 - 7,446 (7,446/7,446)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000351443 (
ENST00000370163
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,576 (73,532)
query : 1 - 7,166 (7,166/7,166)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000351445 (
ENST00000370165
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,045 - 100,389,576 (73,532)
query : 1 - 7,106 (7,106/7,106)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000259645
(
BC057220
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,203 - 100,330,109 (13,907)
query : 5 - 952 (948/982)
5 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000)3'
coverage = 0.994
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 4, extr 2, cyto_pero 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000090217
(
BC020705
)
(Glycogen debranching enzyme isoform 2.)
genome : 100,316,203 - 100,330,086 (13,884)
query : 1 - 925 (925/954)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 3, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000197674 (
NM_000646
)
(Glycogen debranching enzyme isoform 3.)
genome : 100,316,531 - 100,389,579 (73,049)
query : 1 - 7,182 (7,182/7,182)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, nucl 7, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000221852
(
U84011
)
(Glycogen debranching enzyme isoform 3.)
genome : 100,316,531 - 100,389,576 (73,046)
query : 1 - 7,177 (7,177/7,178)
34 exons
identity = 0.997
5'(0.993;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.25
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, nucl 7, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000314569 (
ENST00000361302
)
(Glycogen debranching enzyme isoform 3.)
genome : 100,316,531 - 100,389,576 (73,046)
query : 1 - 7,179 (7,179/7,179)
34 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, nucl 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000328802
(
AB208867
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,316,595 - 100,387,846 (71,252)
query : 1 - 5,242 (5,242/5,242)
33 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.942;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.3333, cyto_plas 9.33333,
nucl 7.5, pero 3, plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000351441 (
ENST00000370161
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,318,226 - 100,389,579 (71,354)
query : 1 - 6,923 (6,923/6,923)
33 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.942;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, nucl 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000197673 (
NM_000645
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,326,766 - 100,389,579 (62,814)
query : 1 - 7,182 (7,182/7,182)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.942;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000196608
(
M85168
)
(Glycogen debranching enzyme isoform 2.)
genome : 100,326,766 - 100,389,576 (62,811)
query : 1 - 7,179 (7,179/7,180)
32 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.942;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR006421 : Glycogen debranching enzyme, metazoa
IPR008928 : Six-hairpin glycosidase-like
IPR010401 : Glycogen debranching enzyme
IPR013781 : Glycoside hydrolase, catalytic domain
IPR017853 : Glycoside hydrolase superfamily
IPR029436 : Eukaryotic glycogen debranching enzyme, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004134 : Molecular Function : 4-alpha-glucanotransferase activity
0004135 : Molecular Function : amylo-alpha-1,6-glucosidase activity
0005975 : Biological Process : carbohydrate metabolic process
0005978 : Biological Process : glycogen biosynthetic process
0005980 : Biological Process : glycogen catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000314782 (
ENST00000361522
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,326,766 - 100,389,576 (62,811)
query : 1 - 7,179 (7,179/7,179)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.942;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000581887 (
ENST00000477753
)
(Glycogen debranching enzyme; Glycogen debrancher; Includes: 4-alpha-glucanotransferase; EC=2.4.1.25; Oligo-1,4-1,4-glucantransferase; Includes: Amylo-alpha-1,6-glucosidase; Amylo-1,6-glucosidase; EC=3.2.1.33; Dextrin 6-alpha-D-glucosidase;)
genome : 100,340,026 - 100,342,153 (2,128)
query : 1 - 682 (682/682)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.25
,
EC 3.2.1.33
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 5, extr 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0023609
HIT000049579
(
AK130308
)
(Conserved hypothetical protein.)
genome : 100,387,783 - 100,389,576 (1,794)
query : 1 - 1,795 (1,795/1,795)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023609)
HIX0017260
HIT000022356
(
AK097502
)
(Conserved hypothetical protein.)
genome : 100,433,823 - 100,435,528 (1,706)
query : 3 - 1,706 (1,704/1,706)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, mito 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017260)
HIX0017260
HIT000098988
(
BC048339
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,433,939 - 100,435,394 (1,456)
query : 1 - 1,457 (1,457/1,557)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, mito 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017260)
HIX0017260
HIT000552153 (
ENST00000454219
)
(Hypothetical short protein.)
genome : 100,433,939 - 100,435,420 (1,482)
query : 1 - 655 (655/655)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017260)
HIX0199842
HIT000340439
(
BC112310
)
(Hypothetical protein.)
genome : 100,434,001 - 100,435,404 (1,404)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000340441
(
BC112312
)
(Hypothetical protein.)
genome : 100,434,001 - 100,435,404 (1,404)
query : 1 - 577 (577/577)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000204025 (
NM_012243
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,345 - 100,492,533 (57,189)
query : 1 - 5,871 (5,871/5,886)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 6, golg 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000725001 (
NM_001271684
)
(UDP-N-acetylglucosamine transporter isoform 2.)
genome : 100,435,345 - 100,492,533 (57,189)
query : 1 - 5,618 (5,618/5,633)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 13.5, golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000569993 (
ENST00000465289
)
(UDP-N-acetylglucosamine transporter isoform 2.)
genome : 100,435,345 - 100,492,448 (57,104)
query : 1 - 5,533 (5,533/5,533)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 13.5, golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000351435 (
ENST00000370155
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,345 - 100,489,009 (53,665)
query : 1 - 2,347 (2,347/2,347)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 6, golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000525927 (
ENST00000427993
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,535 - 100,488,512 (52,978)
query : 1 - 1,759 (1,759/1,759)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 6, golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000058718
(
AB021981
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,540 - 100,489,006 (53,467)
query : 1 - 2,149 (2,149/2,149)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004689 : UDP-galactose transporter
IPR007271 : Nucleotide-sugar transporter
GO :
0000139 : Cellular Component : Golgi membrane
0005338 : Molecular Function : nucleotide-sugar transmembrane transporter activity
0005351 : Molecular Function : sugar:proton symporter activity
0008643 : Biological Process : carbohydrate transport
0015780 : Biological Process : nucleotide-sugar transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 6, golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000032238
(
BC005136
)
(UDP-N-acetylglucosamine transporter isoform 2.)
genome : 100,435,562 - 100,489,563 (54,002)
query : 1 - 2,431 (2,431/2,450)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004689 : UDP-galactose transporter
IPR007271 : Nucleotide-sugar transporter
GO :
0000139 : Cellular Component : Golgi membrane
0005338 : Molecular Function : nucleotide-sugar transmembrane transporter activity
0005351 : Molecular Function : sugar:proton symporter activity
0008643 : Biological Process : carbohydrate transport
0015780 : Biological Process : nucleotide-sugar transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 13.5, golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000423370
(
AK290573
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,587 - 100,488,481 (52,895)
query : 1 - 1,577 (1,577/1,577)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004689 : UDP-galactose transporter
IPR007271 : Nucleotide-sugar transporter
GO :
0000139 : Cellular Component : Golgi membrane
0005338 : Molecular Function : nucleotide-sugar transmembrane transporter activity
0005351 : Molecular Function : sugar:proton symporter activity
0008643 : Biological Process : carbohydrate transport
0015780 : Biological Process : nucleotide-sugar transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 6, golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000306746
(
CR749816
)
Representative transcript
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,992 - 100,492,533 (56,542)
query : 1 - 5,213 (5,213/5,228)
9 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.997;0.998)3'
coverage = 1.000
InterPro :
IPR004689 : UDP-galactose transporter
IPR007271 : Nucleotide-sugar transporter
GO :
0000139 : Cellular Component : Golgi membrane
0005338 : Molecular Function : nucleotide-sugar transmembrane transporter activity
0005351 : Molecular Function : sugar:proton symporter activity
0008643 : Biological Process : carbohydrate transport
0015780 : Biological Process : nucleotide-sugar transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AF057365
Gallus
sp. (Chicken) : AJ720360
Mus
sp. (Mouse) : AK041195
Rattus
sp. (Rat) : BC079371
Danio
sp. (Zebrafish) : BC092945
Bos
sp. (Cow) : BC153220
Monodelphis
sp. (Opossum) : ENSMODT00000004646
Oryzias
sp. (Medaka) : ENSORLT00000005255
Oryzias
sp. (Medaka) : ENSORLT00000005680
Pongo
sp. (Orangutan) : ENSPPYT00000001345
Tetraodon
sp. (Tetraodon) : GSTENT00012657001
Tetraodon
sp. (Tetraodon) : GSTENT00014982001
Takifugu
sp. (Fugu) : SINFRUT00000160792
Takifugu
sp. (Fugu) : SINFRUT00000175396
Macaca
sp. (Macaque) : XM_001106610
Equus
sp. (Horse) : XM_001489930
Danio
sp. (Zebrafish) : XM_001923127
Pan
sp. (Chimpanzee) : XM_513586
HIX0199842
HIT000725002 (
NM_001271685
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,992 - 100,492,533 (56,542)
query : 1 - 5,706 (5,706/5,721)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000632115 (
ENST00000533028
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,435,992 - 100,492,535 (56,544)
query : 1 - 5,218 (5,218/5,218)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000631788 (
ENST00000532693
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,436,009 - 100,464,883 (28,875)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, cyto_mito 10.5, extr_plas 4.5, extr 4,
cyto 3.5, plas 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000351433 (
ENST00000370153
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,436,093 - 100,489,006 (52,914)
query : 1 - 2,078 (2,078/2,078)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000520012 (
ENST00000422078
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,458,599 - 100,480,897 (22,299)
query : 1 - 748 (748/748)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000008263
(
AK024989
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,459,158 - 100,489,011 (29,854)
query : 1 - 1,915 (1,915/1,931)
7 exons
identity = 0.999
5'(1.000;1.000;0.992;0.994;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004689 : UDP-galactose transporter
IPR007271 : Nucleotide-sugar transporter
GO :
0000139 : Cellular Component : Golgi membrane
0005338 : Molecular Function : nucleotide-sugar transmembrane transporter activity
0005351 : Molecular Function : sugar:proton symporter activity
0008643 : Biological Process : carbohydrate transport
0015780 : Biological Process : nucleotide-sugar transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000351436 (
ENST00000370156
)
(UDP-N-acetylglucosamine transporter; Golgi UDP-GlcNAc transporter; Solute carrier family 35 member A3;)
genome : 100,459,158 - 100,489,011 (29,854)
query : 1 - 1,914 (1,914/1,914)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0199842
HIT000599956 (
ENST00000496646
)
(Conserved hypothetical protein.)
genome : 100,480,906 - 100,488,449 (7,544)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.8333, extr 11, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199842)
HIX0023164
HIT000020757
(
AK095902
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,484,730 - 100,487,065 (2,336)
query : 1 - 2,335 (2,335/2,335)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, extr_plas 17, plas 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023164)
HIX0023732
HIT000046169
(
AK126296
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,496,122 - 100,501,188 (5,067)
query : 1 - 5,072 (5,072/5,072)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto_nucl 4, nucl 3.5, cyto 3.5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023732)
HIX0023732
HIT000677737 (
ENST00000564623
)
(Conserved hypothetical protein.)
genome : 100,496,122 - 100,501,188 (5,067)
query : 1 - 5,067 (5,067/5,067)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023732)
HIX0000811
HIT000351432 (
ENST00000370152
)
(Hippocampus abundant transcript 1 protein; Putative tetracycline transporter-like protein;)
genome : 100,503,653 - 100,548,933 (45,281)
query : 1 - 2,777 (2,777/2,777)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000013786
(
AK057172
)
Representative transcript
(Hippocampus abundant transcript 1 protein; Putative tetracycline transporter-like protein;)
genome : 100,503,653 - 100,548,278 (44,626)
query : 1 - 2,122 (2,122/2,122)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.992;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR005829 : Sugar transporter, conserved site
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851716
Mus
sp. (Mouse) : AK158838
Danio
sp. (Zebrafish) : BC097075
Bos
sp. (Cow) : BC148039
Tetraodon
sp. (Tetraodon) : CR734197
Monodelphis
sp. (Opossum) : ENSMODT00000004616
Oryzias
sp. (Medaka) : ENSORLT00000019091
Oryzias
sp. (Medaka) : ENSORLT00000022528
Pongo
sp. (Orangutan) : ENSPPYT00000001344
Rattus
sp. (Rat) : ENSRNOT00000020907
Takifugu
sp. (Fugu) : SINFRUT00000163219
Pan
sp. (Chimpanzee) : XM_001159977
Equus
sp. (Horse) : XM_001488869
Canis
sp. (Dog) : XM_849857
HIX0000811
HIT000211103 (
NM_033055
)
(Hippocampus abundant transcript 1 protein; Putative tetracycline transporter-like protein;)
genome : 100,503,789 - 100,548,928 (45,140)
query : 1 - 2,636 (2,636/2,664)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000079497
(
AF427492
)
(Hippocampus abundant transcript 1 protein; Putative tetracycline transporter-like protein;)
genome : 100,503,789 - 100,547,765 (43,977)
query : 1 - 1,473 (1,473/1,473)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR005829 : Sugar transporter, conserved site
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000812
HIT000530228 (
ENST00000432294
)
(Non-protein coding transcript.)
genome : 100,523,546 - 100,550,027 (26,482)
query : 1 - 384 (384/384)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000811
HIT000519595 (
ENST00000421661
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,524,227 - 100,527,671 (3,445)
query : 1 - 467 (467/467)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R._mito 4.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000334186
(
BC073837
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,525,438 - 100,542,789 (17,352)
query : 1 - 713 (713/799)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;0.957)3'
coverage = 0.964
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR005829 : Sugar transporter, conserved site
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000338898
(
BC107768
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,525,445 - 100,548,791 (23,347)
query : 4 - 2,249 (2,246/2,280)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 0.998
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR005829 : Sugar transporter, conserved site
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000261372
(
BC064409
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,525,534 - 100,548,928 (23,395)
query : 1 - 2,293 (2,293/2,309)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000021524
(
AK096669
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,527,381 - 100,548,871 (21,491)
query : 13 - 2,230 (2,218/2,230)
8 exons
identity = 0.998
5'(0.968;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.995
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000093188
(
BC033696
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,534,088 - 100,548,928 (14,841)
query : 12 - 1,883 (1,872/1,938)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.994
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR011701 : Major facilitator superfamily
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000082243
(
AK075208
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,535,168 - 100,548,927 (13,760)
query : 19 - 1,836 (1,818/1,836)
5 exons
identity = 0.999
5'(1.000;1.000;0.990;1.000;0.999)3'
coverage = 0.990
InterPro :
IPR001958 : Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
IPR011701 : Major facilitator superfamily
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0005886 : Cellular Component : plasma membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000025864
(
AL137576
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,542,739 - 100,548,925 (6,187)
query : 4 - 1,727 (1,724/1,746)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.998
InterPro :
IPR011701 : Major facilitator superfamily
GO :
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 8, plas 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000811
HIT000047544
(
AK127671
)
(Hippocampus abundant transcript 1 protein.)
genome : 100,546,781 - 100,548,792 (2,012)
query : 1 - 2,012 (2,012/2,012)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000811)
HIX0000812
HIT000055649
(
BX641109
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,549,130 - 100,598,469 (49,340)
query : 2 - 3,920 (3,919/3,977)
16 exons
identity = 0.999
3'(0.999;0.989;1.000;1.000;1.000;1.000;0.994;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000057053
(
BX648406
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,549,128 - 100,598,407 (49,280)
query : 1 - 3,769 (3,769/3,815)
17 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.990;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000253176
(
AY359522
)
Representative transcript
(Spindle assembly abnormal protein 6 homolog; HsSAS-6;)
genome : 100,549,103 - 100,598,511 (49,409)
query : 1 - 3,896 (3,896/3,908)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719282
Mus
sp. (Mouse) : AK165224
Danio
sp. (Zebrafish) : BC045420
Bos
sp. (Cow) : BC148901
Equus
sp. (Horse) : ENSECAT00000024885
Monodelphis
sp. (Opossum) : ENSMODT00000004601
Oryzias
sp. (Medaka) : ENSORLT00000003087
Pongo
sp. (Orangutan) : ENSPPYT00000001343
Rattus
sp. (Rat) : ENSRNOT00000020757
Tetraodon
sp. (Tetraodon) : GSTENT00006480001
Takifugu
sp. (Fugu) : SINFRUT00000151492
Macaca
sp. (Macaque) : XM_001106791
Pan
sp. (Chimpanzee) : XM_513588
Canis
sp. (Dog) : XM_547263
HIX0000812
HIT000319037 (
NM_194292
)
(Spindle assembly abnormal protein 6 homolog; HsSAS-6;)
genome : 100,549,103 - 100,598,511 (49,409)
query : 1 - 3,896 (3,896/3,908)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000009024
(
AK025750
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,549,118 - 100,571,446 (22,329)
query : 1 - 2,321 (2,321/2,344)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000028995
(
AL834265
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,549,126 - 100,586,960 (37,835)
query : 1 - 3,277 (3,277/3,297)
13 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000112855 (
ENST00000287482
)
(Spindle assembly abnormal protein 6 homolog; HsSAS-6;)
genome : 100,549,119 - 100,598,511 (49,393)
query : 1 - 3,880 (3,880/3,880)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000567007 (
ENST00000462159
)
(Spindle assembly abnormal protein 6 homolog; HsSAS-6;)
genome : 100,549,119 - 100,598,511 (49,393)
query : 1 - 3,972 (3,972/3,972)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000497137
(
AK302513
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,550,364 - 100,598,367 (48,004)
query : 35 - 2,525 (2,491/2,525)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000336437
(
BC101026
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,550,677 - 100,598,444 (47,768)
query : 1 - 2,175 (2,175/2,175)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000634206 (
ENST00000535161
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,550,677 - 100,598,444 (47,768)
query : 1 - 2,175 (2,175/2,175)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000812
HIT000426690
(
AK307824
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,550,699 - 100,598,518 (47,820)
query : 1 - 2,226 (2,226/2,226)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0161147
HIT000541069 (
ENST00000443135
)
(Complex 1 LYR protein family protein.)
genome : 100,564,795 - 100,565,046 (252)
query : 1 - 252 (252/252)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 8, mito 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161147)
HIX0000812
HIT000259479
(
BC054889
)
(Spindle assembly abnormal protein 6 homolog.)
genome : 100,576,003 - 100,598,511 (22,509)
query : 4 - 850 (847/879)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000812)
HIX0000813
HIT000207602 (
NM_019083
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,706 - 100,616,054 (17,349)
query : 1 - 3,143 (3,143/3,157)
11 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000259651
(
BC057226
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,710 - 100,615,954 (17,245)
query : 5 - 2,610 (2,606/2,645)
10 exons
identity = 0.999
5'(1.000)3'
coverage = 0.985
EC number :
EC 2.1.1.225
InterPro :
IPR007871 : Methyltransferase TRM13
IPR021721 : Zinc finger, CCCH-type, TRM13
IPR022776 : TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
GO :
0008033 : Biological Process : tRNA processing
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000351423 (
ENST00000370143
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,706 - 100,606,096 (7,391)
query : 1 - 476 (476/476)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000265626
(
BC075811
)
Representative transcript
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,709 - 100,616,050 (17,342)
query : 1 - 3,136 (3,136/3,217)
11 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
InterPro :
IPR007871 : Methyltransferase TRM13
IPR021721 : Zinc finger, CCCH-type, TRM13
IPR022776 : TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
GO :
0008033 : Biological Process : tRNA processing
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK039588
Danio
sp. (Zebrafish) : BC091859
Rattus
sp. (Rat) : BC103656
Bos
sp. (Cow) : BC114134
Canis
sp. (Dog) : ENSCAFT00000031860
Equus
sp. (Horse) : ENSECAT00000024208
Oryzias
sp. (Medaka) : ENSORLT00000004127
Pongo
sp. (Orangutan) : ENSPPYT00000001342
Tetraodon
sp. (Tetraodon) : GSTENT00008272001
Takifugu
sp. (Fugu) : SINFRUT00000163840
Macaca
sp. (Macaque) : XM_001106928
Pan
sp. (Chimpanzee) : XM_001160498
Monodelphis
sp. (Opossum) : XM_001381831
Gallus
sp. (Chicken) : XM_422313
HIX0000813
HIT000490452
(
AK295828
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,709 - 100,610,260 (11,552)
query : 1 - 1,236 (1,236/1,236)
9 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
InterPro :
IPR021721 : Zinc finger, CCCH-type, TRM13
IPR022776 : TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
GO :
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 9.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000004555
(
AK002081
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,719 - 100,616,053 (17,335)
query : 1 - 3,129 (3,129/3,129)
11 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000351421 (
ENST00000370141
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,719 - 100,616,053 (17,335)
query : 1 - 3,129 (3,129/3,129)
11 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 17, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000422201
(
AK289404
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,719 - 100,606,556 (7,838)
query : 1 - 993 (993/993)
6 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
InterPro :
IPR021721 : Zinc finger, CCCH-type, TRM13
IPR022776 : TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
GO :
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000493565
(
AK298941
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,721 - 100,613,883 (15,163)
query : 1 - 1,014 (1,014/1,028)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 0.986
EC number :
EC 2.1.1.225
InterPro :
IPR007871 : Methyltransferase TRM13
IPR021721 : Zinc finger, CCCH-type, TRM13
IPR022776 : TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
GO :
0008033 : Biological Process : tRNA processing
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000003623
(
AK001149
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,721 - 100,610,123 (11,403)
query : 1 - 1,582 (1,582/1,582)
8 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000586367 (
ENST00000482437
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,721 - 100,610,123 (11,403)
query : 1 - 1,582 (1,582/1,582)
8 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000489362
(
AK294738
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,721 - 100,610,015 (11,295)
query : 1 - 1,022 (1,022/1,022)
9 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
InterPro :
IPR021721 : Zinc finger, CCCH-type, TRM13
IPR022776 : TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
GO :
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, extr 10, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0000813
HIT000351419 (
ENST00000370139
)
(tRNA:m(4)X modification enzyme TRM13 homolog; EC=2.1.1.225; Coiled-coil domain-containing protein 76;)
genome : 100,598,771 - 100,606,368 (7,598)
query : 1 - 711 (711/711)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.225
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000813)
HIX0022321
pHIT000072281 ( pHIT000072281 )
(Conserved hypothetical protein.)
genome : 99,127,222 - 99,225,687 (98,466)
query : 1 - 1,677 (1,677/1,677)
12 exons
InterPro :
IPR001683 : Phox homologous domain
GO :
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022321)
CAGE tag :
H05BC27I1303,H05BD28F1703,H05BF32P1811
H06BA24O0303,H06BA52G0203
AL672220.6
99000001-99067258 F +
NCBI
AC095031.2
99067259-99126329 F +
NCBI
AL627442.10
99126330-99258144 F +
NCBI
AL590110.11
99258145-99384987 F +
NCBI
AL161744.7
99384988-99470174 F +
NCBI
AL445433.14
99470175-99608992 F +
NCBI
AL136147.10
99608993-99760031 F +
NCBI
AL139425.8
99760032-99826889 F +
NCBI
AL365220.24
99826890-99937917 F +
NCBI
AL449063.13
99937918-100063239 F +
NCBI
AC093559.2
100063240-100075239 F +
NCBI
AC105270.2
100075240-100231283 F +
NCBI
AL451051.6
100231284-100308054 F +
NCBI
AC096949.2
100308055-100412507 F -
NCBI
AC118553.3
100412508-100498342 F +
NCBI
AC093019.2
100498343-100572364 F +
NCBI
AL445928.8
100572365-100600000 F +
NCBI