bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0191519
pHIT000017561 ( pHIT000017561 )
Representative transcript
(Hypothetical protein.)
genome : 64,488,641 - 64,524,399 (35,759)
query : 1 - 384 (384/384)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0191519)
CAGE tag :
H10BB03M1905
HIX0170603
HIT000510189 (
ENST00000412255
)
(Conserved hypothetical protein.)
genome : 64,500,968 - 64,501,145 (178)
query : 1 - 178 (178/178)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5, cyto 1.5, cyto_pero 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170603)
HIX0008860
HIT000523224 (
ENST00000425290
)
(2-aminoethanethiol dioxygenase.)
genome : 64,553,322 - 64,565,647 (12,326)
query : 1 - 688 (688/688)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000047567
(
AK127694
)
(2-aminoethanethiol dioxygenase; EC=1.13.11.19; Cysteamine dioxygenase;)
genome : 64,564,516 - 64,567,096 (2,581)
query : 3 - 2,583 (2,581/2,583)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR011051 : RmlC-like cupin domain
IPR012864 : Cysteamine dioxygenase
IPR014710 : RmlC-like jelly roll fold
GO :
0047800 : Molecular Function : cysteamine dioxygenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 12.8333, cyto 8,
cyto_pero 5.33333, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000210897 (
NM_032804
)
(2-aminoethanethiol dioxygenase; EC=1.13.11.19; Cysteamine dioxygenase;)
genome : 64,564,516 - 64,568,239 (3,724)
query : 1 - 3,724 (3,724/3,739)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 12.5, cyto 8, cyto_nucl 7.5,
cyto_pero 6.16667, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000355063 (
ENST00000373783
)
(2-aminoethanethiol dioxygenase; EC=1.13.11.19; Cysteamine dioxygenase;)
genome : 64,564,516 - 64,568,238 (3,723)
query : 1 - 3,723 (3,723/3,723)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 12.5, cyto 8, cyto_nucl 7.5,
cyto_pero 6.16667, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000038390
(
BC018660
)
(2-aminoethanethiol dioxygenase; EC=1.13.11.19; Cysteamine dioxygenase;)
genome : 64,564,617 - 64,567,093 (2,477)
query : 6 - 2,483 (2,478/2,513)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.998
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR011051 : RmlC-like cupin domain
IPR012864 : Cysteamine dioxygenase
IPR014710 : RmlC-like jelly roll fold
GO :
0047800 : Molecular Function : cysteamine dioxygenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 12.8333, cyto 8,
cyto_pero 5.33333, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000040580
(
BC028589
)
(2-aminoethanethiol dioxygenase; EC=1.13.11.19; Cysteamine dioxygenase;)
genome : 64,564,646 - 64,568,239 (3,594)
query : 1 - 3,594 (3,594/3,609)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR011051 : RmlC-like cupin domain
IPR012864 : Cysteamine dioxygenase
IPR014710 : RmlC-like jelly roll fold
GO :
0047800 : Molecular Function : cysteamine dioxygenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 12.8333, cyto 8,
cyto_pero 5.33333, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000262708
(
BC067740
)
Representative transcript
(2-aminoethanethiol dioxygenase; EC=1.13.11.19; Cysteamine dioxygenase;)
genome : 64,564,708 - 64,567,086 (2,379)
query : 1 - 2,379 (2,379/2,392)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR011051 : RmlC-like cupin domain
IPR012864 : Cysteamine dioxygenase
IPR014710 : RmlC-like jelly roll fold
GO :
0047800 : Molecular Function : cysteamine dioxygenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 12.5, cyto 8, cyto_nucl 7.5,
cyto_pero 6.16667, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC057106
Danio
sp. (Zebrafish) : BC065461
Equus
sp. (Horse) : ENSECAT00000011107
Oryzias
sp. (Medaka) : ENSORLT00000018313
Pongo
sp. (Orangutan) : ENSPPYT00000002896
Rattus
sp. (Rat) : ENSRNOT00000000791
Tetraodon
sp. (Tetraodon) : GSTENT00034580001
Takifugu
sp. (Fugu) : SINFRUT00000142867
Macaca
sp. (Macaque) : XM_001092839
Pan
sp. (Chimpanzee) : XM_001161814
Monodelphis
sp. (Opossum) : XM_001370690
Canis
sp. (Dog) : XM_546121
HIX0008860
HIT000010725
(
AK027453
)
(2-aminoethanethiol dioxygenase.)
genome : 64,564,921 - 64,567,096 (2,176)
query : 1 - 2,176 (2,176/2,176)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.13.11.19
KEGG pathway :
00430 : Taurine and hypotaurine metabolism (19)
01100 : Metabolic pathways (1346)
InterPro :
IPR011051 : RmlC-like cupin domain
IPR012864 : Cysteamine dioxygenase
IPR014710 : RmlC-like jelly roll fold
GO :
0047800 : Molecular Function : cysteamine dioxygenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, extr 13, cyto_nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008860
HIT000023746
(
AL049319
)
(Hypothetical short protein.)
genome : 64,566,899 - 64,568,237 (1,339)
query : 4 - 1,342 (1,339/1,363)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008860)
HIX0008861
HIT000051446
(
BC035625
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,756 - 64,576,115 (4,360)
query : 1 - 3,036 (3,036/3,061)
2 exons
identity = 0.977
3'(0.972;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000306642
(
CR749641
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,756 - 64,576,117 (4,362)
query : 1 - 2,970 (2,970/2,988)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000560324 (
NM_001136178
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,756 - 64,578,927 (7,172)
query : 1 - 2,850 (2,850/2,864)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000197443 (
NM_000399
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,756 - 64,576,126 (4,371)
query : 1 - 2,978 (2,978/2,992)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000560323 (
NM_001136177
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,756 - 64,576,126 (4,371)
query : 1 - 2,795 (2,795/2,809)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000560325 (
NM_001136179
)
(E3 SUMO-protein ligase EGR2 isoform b.)
genome : 64,571,756 - 64,576,126 (4,371)
query : 1 - 2,878 (2,878/2,892)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000105210 (
ENST00000242480
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,756 - 64,576,115 (4,360)
query : 1 - 2,968 (2,968/2,968)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000191231
(
J04076
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,757 - 64,575,842 (4,086)
query : 1 - 2,700 (2,700/2,700)
2 exons
identity = 0.993
3'(0.992;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000016266
(
AK091399
)
(E3 SUMO-protein ligase EGR2 isoform b.)
genome : 64,571,760 - 64,576,075 (4,316)
query : 1 - 2,823 (2,823/2,823)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000536966 (
ENST00000439032
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,571,763 - 64,578,927 (7,165)
query : 1 - 2,844 (2,844/2,844)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000509666 (
ENST00000411732
)
(E3 SUMO-protein ligase EGR2 isoform b.)
genome : 64,571,763 - 64,576,126 (4,364)
query : 1 - 2,872 (2,872/2,872)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000071122
(
AF139463
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,572,766 - 64,575,922 (3,157)
query : 1 - 1,765 (1,765/1,765)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000431679
(
AK312813
)
Representative transcript
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,572,967 - 64,578,927 (5,961)
query : 1 - 1,641 (1,641/1,641)
4 exons
identity = 0.998
3'(0.998;1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB032420
Macaca
sp. (Macaque) : AB174510
Danio
sp. (Zebrafish) : BC081622
Gallus
sp. (Chicken) : BX929940
Equus
sp. (Horse) : ENSECAT00000011152
Oryzias
sp. (Medaka) : ENSORLT00000018303
Pongo
sp. (Orangutan) : ENSPPYT00000002895
Tetraodon
sp. (Tetraodon) : GSTENT00008478001
Takifugu
sp. (Fugu) : SINFRUT00000176458
Mus
sp. (Mouse) : X06746
Pan
sp. (Chimpanzee) : XM_001165856
Monodelphis
sp. (Opossum) : XM_001370662
Canis
sp. (Dog) : XM_536361
HIX0008861
HIT000491454
(
AK296830
)
(E3 SUMO-protein ligase EGR2 isoform b.)
genome : 64,573,050 - 64,578,419 (5,370)
query : 1 - 1,190 (1,190/1,190)
4 exons
identity = 0.993
3'(1.000;0.983;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021849 : Protein of unknown function DUF3446
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.3333, cyto 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0008861
HIT000597318 (
ENST00000493899
)
(E3 SUMO-protein ligase EGR2; EC=6.3.2.-; AT591; Early growth response protein 2; EGR-2; Zinc finger protein Krox-20;)
genome : 64,574,193 - 64,679,660 (105,468)
query : 1 - 686 (686/686)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008861)
HIX0115018
pHIT000017566 ( pHIT000017566 )
Representative transcript
(Conserved hypothetical protein.)
genome : 64,576,392 - 64,576,691 (300)
query : 1 - 300 (300/300)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115018)
CAGE tag :
H08BA10K2110
HIX0190686
pHIT000083585 ( pHIT000083585 )
(Hypothetical protein.)
genome : 64,578,174 - 64,638,744 (60,571)
query : 1 - 744 (744/744)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190686)
CAGE tag :
H08BA10K2110
HIX0190686
pHIT000109044 ( pHIT000109044 )
Representative transcript
(Hypothetical protein.)
genome : 64,578,360 - 64,670,985 (92,626)
query : 1 - 600 (600/600)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190686)
CAGE tag :
T10F03D45C7E
HIX0190686
pHIT000083002 ( pHIT000083002 )
(Hypothetical protein.)
genome : 64,578,360 - 64,640,631 (62,272)
query : 1 - 486 (486/486)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190686)
CAGE tag :
H08BA47G1307
HIX0170886
HIT000530953 (
ENST00000433019
)
(Non-protein coding transcript.)
genome : 64,883,698 - 64,885,297 (1,600)
query : 1 - 505 (505/505)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170886)
HIX0008862
HIT000209914 (
NM_030759
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,007 - 64,914,786 (21,780)
query : 1 - 1,896 (1,896/1,916)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000011571
(
AK054957
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,050 - 64,914,783 (21,734)
query : 2 - 1,851 (1,850/1,851)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000111606_01 (
ENST00000277746
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,050 - 64,914,783 (21,734)
query : 1 - 1,850 (1,850/1,850)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000025252
(
AL136656
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,053 - 64,914,784 (21,732)
query : 2 - 1,849 (1,848/1,866)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000002448
(
AF267866
)
(Nuclear receptor-binding factor 2.)
genome : 64,893,067 - 64,914,187 (21,121)
query : 12 - 1,250 (1,239/1,250)
4 exons
identity = 0.986
5'(0.995;1.000;1.000;0.983)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000496280
(
AK301656
)
(Nuclear receptor-binding factor 2.)
genome : 64,893,085 - 64,914,630 (21,546)
query : 1 - 1,577 (1,577/1,577)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, mito 10, cyto 5.5,
mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000533444 (
ENST00000435510
)
(Nuclear receptor-binding factor 2.)
genome : 64,893,085 - 64,914,630 (21,546)
query : 1 - 1,577 (1,577/1,577)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, mito 10, cyto 5.5,
mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000384387
(
AK225257
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,096 - 64,914,685 (21,590)
query : 1 - 1,704 (1,704/1,704)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000384386
(
AK225256
)
Representative transcript
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,100 - 64,914,786 (21,687)
query : 3 - 1,803 (1,801/1,822)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB024930
Mus
sp. (Mouse) : BC019448
Danio
sp. (Zebrafish) : BC075978
Bos
sp. (Cow) : BC123769
Gallus
sp. (Chicken) : BX950839
Pongo
sp. (Orangutan) : CR861322
Equus
sp. (Horse) : ENSECAT00000011403
Oryzias
sp. (Medaka) : ENSORLT00000018294
Takifugu
sp. (Fugu) : SINFRUT00000137304
Macaca
sp. (Macaque) : XM_001092137
Pan
sp. (Chimpanzee) : XM_001165959
Monodelphis
sp. (Opossum) : XM_001370534
Canis
sp. (Dog) : XM_536362
HIX0008862
HIT000251324
(
AY267840
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,119 - 64,914,784 (21,666)
query : 1 - 1,780 (1,780/1,797)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000251323
(
AY267839
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,119 - 64,914,784 (21,666)
query : 1 - 1,633 (1,633/1,649)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000035391
(
BC011707
)
(Nuclear receptor-binding factor 2; NRBF-2; Comodulator of PPAR and RXR;)
genome : 64,893,133 - 64,914,784 (21,652)
query : 1 - 1,768 (1,768/1,798)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000530665_03 (
ENST00000432731
)
(Nuclear receptor-binding factor 2.)
genome : 64,893,230 - 64,913,978 (20,749)
query : 1 - 865 (865/865)
4 exons
identity = 0.976
5'(0.968;0.976;0.902;0.980)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000620199_03 (
ENST00000520874
)
(Nuclear receptor-binding factor 2.)
genome : 64,893,230 - 64,913,972 (20,743)
query : 1 - 850 (850/850)
4 exons
identity = 0.963
5'(0.968;0.976;0.927;0.963)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, nucl 5, mito 3, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008862
HIT000085998
(
BC001345
)
(Nuclear receptor-binding factor 2.)
genome : 64,913,307 - 64,914,786 (1,480)
query : 1 - 1,480 (1,480/1,500)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR015056 : Protein of unknown function DUF1875
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008862)
HIX0008863
HIT000262023
(
BC065742
)
(JmjC domain containing protein.)
genome : 64,926,989 - 64,936,128 (9,140)
query : 4 - 1,112 (1,109/1,218)
3 exons
identity = 0.998
3'(0.998;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 12, cyto_nucl 8.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000095080
(
BC037981
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,926,989 - 64,936,314 (9,326)
query : 1 - 1,296 (1,296/1,339)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000026829
(
AL831917
)
(JmjC domain containing protein.)
genome : 64,926,981 - 64,974,793 (47,813)
query : 1 - 7,314 (7,314/7,334)
19 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000316991 (
NM_004241
)
(JmjC domain containing protein.)
genome : 64,926,989 - 65,028,982 (101,994)
query : 1 - 8,392 (8,392/8,415)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000098526
(
BC047331
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,926,989 - 64,928,328 (1,340)
query : 4 - 1,043 (1,040/1,066)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.997
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000571970 (
ENST00000467356
)
(JmjC domain containing protein.)
genome : 64,926,981 - 64,936,315 (9,335)
query : 1 - 1,305 (1,305/1,305)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000504160 (
ENST00000402544
)
(JmjC domain containing protein.)
genome : 64,926,990 - 65,028,982 (101,993)
query : 1 - 8,391 (8,391/8,391)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000001095
(
AB037801
)
(Conserved hypothetical protein.)
genome : 64,926,990 - 64,967,607 (40,618)
query : 1 - 4,614 (4,614/4,614)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000043380
(
AK123507
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,926,990 - 64,929,230 (2,241)
query : 1 - 1,934 (1,934/1,934)
2 exons
identity = 0.996
3'(0.991;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000054738
(
BX537954
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,927,120 - 65,028,947 (101,828)
query : 2 - 7,998 (7,997/8,015)
22 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;0.999;1.000;0.998;0.995;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000388995
(
BC126403
)
Representative transcript
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,927,342 - 65,028,826 (101,485)
query : 1 - 8,161 (8,161/8,161)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 14.5, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000502165
(
BC143722
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,927,350 - 65,028,826 (101,477)
query : 1 - 8,149 (8,149/8,149)
25 exons
identity = 1.000
3'(1.000;0.992;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000641966 (
ENST00000542921
)
(JmjC domain containing protein.)
genome : 64,927,350 - 65,028,826 (101,477)
query : 1 - 8,149 (8,149/8,149)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0018461
HIT000011796
(
AK055182
)
Representative transcript
(Conserved hypothetical protein.)
genome : 64,929,913 - 64,932,684 (2,772)
query : 1 - 2,771 (2,771/2,771)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 3, nucl 3, cyto_pero 3,
cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018461)
HIX0008863
HIT000008265
(
AK024991
)
(JmjC domain containing protein.)
genome : 64,936,580 - 64,967,485 (30,906)
query : 1 - 3,760 (3,760/3,780)
12 exons
identity = 0.998
3'(0.998;1.000;0.992;0.989;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000125031 (
ENST00000327520
)
(JmjC domain containing protein.)
genome : 64,936,580 - 64,967,485 (30,906)
query : 1 - 3,761 (3,761/3,781)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000193624
(
L40411
)
(Conserved hypothetical protein.)
genome : 64,946,076 - 64,950,857 (4,782)
query : 1 - 550 (550/550)
3 exons
identity = 0.993
3'(1.000;0.996;0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 18, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000601171 (
ENST00000497922
)
(Conserved hypothetical protein.)
genome : 64,949,047 - 64,953,097 (4,051)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13.5, cyto 9.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000013274
(
AK056660
)
(Conserved hypothetical protein.)
genome : 64,950,837 - 64,968,143 (17,307)
query : 1 - 2,823 (2,823/2,823)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;0.989;1.000;1.000;0.995;
0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000594216 (
ENST00000490669
)
(Conserved hypothetical protein.)
genome : 64,952,699 - 64,953,409 (711)
query : 1 - 518 (518/518)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 10, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000020439
(
AK095584
)
(Conserved hypothetical protein.)
genome : 64,952,707 - 64,973,267 (20,561)
query : 1 - 3,402 (3,402/3,402)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.995;0.996;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000587195 (
ENST00000483298
)
(Conserved hypothetical protein.)
genome : 64,952,870 - 64,954,454 (1,585)
query : 1 - 772 (772/772)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000091239
(
BC026268
)
(Conserved hypothetical protein.)
genome : 64,966,472 - 64,967,792 (1,321)
query : 1 - 1,321 (1,321/1,349)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000045913
(
AK126040
)
(Conserved hypothetical protein.)
genome : 64,966,753 - 64,974,307 (7,555)
query : 1 - 3,057 (3,057/3,057)
3 exons
identity = 0.999
3'(0.999;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000339054
(
BC108649
)
(Conserved hypothetical protein.)
genome : 64,974,723 - 65,028,983 (54,261)
query : 1 - 1,247 (1,247/1,261)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000573688 (
ENST00000469152
)
(Conserved hypothetical protein.)
genome : 64,975,184 - 65,028,635 (53,452)
query : 1 - 734 (734/734)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, mito 7, nucl 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0008863
HIT000592977 (
ENST00000489372
)
(Conserved hypothetical protein.)
genome : 64,975,313 - 65,029,013 (53,701)
query : 1 - 895 (895/913)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008863)
HIX0190577
HIT000619125_02 (
ENST00000519776
)
(TatD family protein.)
genome : 64,981,884 - 64,982,578 (695)
query : 33 - 677 (645/677)
2 exons
identity = 0.961
5'(0.914;0.972)3'
coverage = 0.953
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190577)
HIX0190577
HIT000111478_02 (
ENST00000276692
)
(TatD family protein.)
genome : 64,981,884 - 64,982,894 (1,011)
query : 8 - 1,018 (1,011/1,018)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 9.83333, cyto_plas 8.83333, extr 7,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190577)
HIX0190577
HIT000622212_02 (
ENST00000522927
)
(TatD family protein.)
genome : 64,981,884 - 64,982,894 (1,011)
query : 2 - 759 (758/782)
3 exons
identity = 0.954
5'(0.803;0.919;0.979)3'
coverage = 0.969
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190577)
HIX0190577
HIT000512057 (
ENST00000414123
)
(TatD family protein.)
genome : 64,981,915 - 64,982,805 (891)
query : 1 - 891 (891/891)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190577)
HIX0190577
HIT000618898_02 (
ENST00000519548
)
(TatD family protein.)
genome : 64,982,052 - 64,982,889 (838)
query : 52 - 889 (838/889)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 0.943
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.5, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190577)
HIX0018555
HIT000017478
(
AK092611
)
Representative transcript
(Hypothetical protein.)
genome : 65,005,260 - 65,008,120 (2,861)
query : 1 - 2,852 (2,852/2,852)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018555)
HIX0035450
HIT000066773
(
AF085894
)
Representative transcript
(Hypothetical short protein.)
genome : 65,070,525 - 65,071,176 (652)
query : 1 - 653 (653/662)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, cyto_nucl 6.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035450)
HIX0026038
HIT000048451
(
AK128578
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,100,192 - 65,103,275 (3,084)
query : 1 - 3,085 (3,085/3,085)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026038)
HIX0170563
HIT000506279 (
ENST00000408136
)
(Non-protein coding transcript.)
genome : 65,132,717 - 65,132,808 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170563)
HIX0170563
HIT000658489 (
NR_031566
)
(Non-protein coding transcript.)
genome : 65,132,717 - 65,132,808 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170563)
HIX0218885
HIT000262489
(
BC067238
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,139,714 - 65,225,761 (86,048)
query : 6 - 1,041 (1,036/1,072)
2 exons
identity = 0.992
3'(0.987;0.998)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11, extr 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218885)
HIX0170417
HIT000537876 (
ENST00000439942
)
(PRELI/MSF1 domain containing protein.)
genome : 65,187,057 - 65,187,713 (657)
query : 1 - 657 (657/657)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12, cyto 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170417)
HIX0170417
HIT000547989 (
ENST00000450055
)
(PRELI/MSF1 domain containing protein.)
genome : 65,187,057 - 65,187,699 (643)
query : 1 - 643 (643/643)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170417)
HIX0170529
HIT000460885_05
(
DQ594354
)
Representative transcript
(Non-protein coding transcript.)
genome : 65,187,323 - 65,187,352 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170529)
HIX0035575
HIT000093690
(
BC035102
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,204,399 - 65,207,333 (2,935)
query : 5 - 2,936 (2,932/2,953)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035575)
HIX0218885
pHIT000083474 ( pHIT000083474 )
(Conserved hypothetical protein.)
genome : 65,214,809 - 65,282,218 (67,410)
query : 1 - 870 (870/870)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218885)
CAGE tag :
H08BA38I0508
HIX0008864
HIT000033500
(
BC007866
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,224,989 - 65,226,321 (1,333)
query : 1 - 1,333 (1,333/1,369)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008864)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000002890
HIX0008864
HIT000563337 (
NR_027182
)
(Conserved hypothetical protein.)
genome : 65,224,989 - 65,226,323 (1,335)
query : 1 - 1,335 (1,335/1,335)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008864)
HIX0008864
HIT000433037
(
AK314171
)
(Conserved hypothetical protein.)
genome : 65,225,032 - 65,225,666 (635)
query : 1 - 635 (635/635)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008864)
HIX0035633
HIT000098448
(
BC047080
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,239,046 - 65,241,718 (2,673)
query : 1 - 2,672 (2,672/2,687)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035633)
HIX0170850
HIT000528238 (
ENST00000430304
)
(Chaperonin Cpn10 family protein.)
genome : 65,249,221 - 65,249,398 (178)
query : 1 - 178 (178/178)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170850)
HIX0008865
HIT000263114
(
BC068557
)
Representative transcript
(Receptor expression-enhancing protein 3;)
genome : 65,281,123 - 65,381,972 (100,850)
query : 1 - 2,294 (2,294/2,308)
8 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR004345 : TB2/DP1/HVA22-related protein
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 6, extr 6, extr_plas 6, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008865)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154559
Danio
sp. (Zebrafish) : BC045373
Danio
sp. (Zebrafish) : BC110095
Bos
sp. (Cow) : BC149986
Gallus
sp. (Chicken) : BX932673
Equus
sp. (Horse) : ENSECAT00000020914
Oryzias
sp. (Medaka) : ENSORLT00000018276
Pongo
sp. (Orangutan) : ENSPPYT00000002889
Pan
sp. (Chimpanzee) : ENSPTRT00000004757
Tetraodon
sp. (Tetraodon) : GSTENT00005361001
Takifugu
sp. (Fugu) : SINFRUT00000128632
Macaca
sp. (Macaque) : XM_001090368
Monodelphis
sp. (Opossum) : XM_001370318
Rattus
sp. (Rat) : XM_215383
Canis
sp. (Dog) : XM_536364
HIX0008865
HIT000259769
(
BC057832
)
(Receptor expression-enhancing protein 3.)
genome : 65,281,168 - 65,370,057 (88,890)
query : 1 - 666 (666/681)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004345 : TB2/DP1/HVA22-related protein
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, plas 6, cyto_mito 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008865)
HIX0008865
HIT000087430
(
BC010040
)
(Receptor expression-enhancing protein 3.)
genome : 65,281,173 - 65,370,057 (88,885)
query : 1 - 661 (661/688)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004345 : TB2/DP1/HVA22-related protein
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, plas 6, cyto_mito 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008865)
HIX0008865
HIT000095319
(
BC038724
)
(Receptor expression-enhancing protein 3;)
genome : 65,281,211 - 65,380,730 (99,520)
query : 1 - 962 (962/1,032)
8 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;0.991;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004345 : TB2/DP1/HVA22-related protein
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 6, extr 6, extr_plas 6, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008865)
HIX0008865
HIT000422773
(
AK289976
)
(Receptor expression-enhancing protein 3;)
genome : 65,281,222 - 65,380,706 (99,485)
query : 1 - 929 (929/929)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR004345 : TB2/DP1/HVA22-related protein
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 6, extr 6, extr_plas 6, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008865)
HIX0008865
HIT000255493
(
AY562241
)
(Receptor expression-enhancing protein 3.)
genome : 65,281,306 - 65,359,067 (77,762)
query : 1 - 441 (441/441)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004345 : TB2/DP1/HVA22-related protein
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 6, E.R. 4, mito 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008865)
HIX0218966
HIT000038389
(
BC018658
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,383,168 - 65,384,336 (1,169)
query : 4 - 1,177 (1,174/1,206)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218966)
HIX0171106
HIT000545943 (
ENST00000448009
)
(Conserved hypothetical protein.)
genome : 65,394,077 - 65,394,587 (511)
query : 1 - 511 (511/511)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto_nucl 9.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171106)
HIX0171057
HIT000542704 (
ENST00000444770
)
(Conserved hypothetical protein.)
genome : 65,424,424 - 65,750,328 (325,905)
query : 1 - 794 (794/794)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171057)
HIX0128305
HIT000123452_03 (
ENST00000323345
)
(Ribosomal protein L7A/L8 family protein.)
genome : 65,662,144 - 65,663,025 (882)
query : 11 - 891 (881/891)
1 exon
identity = 0.957
3'(0.957)5'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, plas 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128305)
HIX0128305
HIT000677992_03 (
ENST00000564892
)
(Ribosomal protein L7A/L8 family protein.)
genome : 65,662,144 - 65,663,025 (882)
query : 11 - 891 (881/891)
1 exon
identity = 0.957
3'(0.957)5'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, plas 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128305)
HIX0128305
HIT000682140_03 (
ENST00000569194
)
(Ribosomal protein L7A/L8 family protein.)
genome : 65,662,144 - 65,663,002 (859)
query : 1 - 680 (680/680)
2 exons
identity = 0.955
3'(0.954;0.956)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 9, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128305)
HIX0128305
HIT000586771_06 (
ENST00000482859
)
(Ribosomal protein L7A/L8 family protein.)
genome : 65,662,204 - 65,663,005 (802)
query : 1 - 796 (796/796)
1 exon
identity = 0.950
3'(0.950)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 9.5, cyto_nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128305)
HIX0128305
HIT000550755 (
ENST00000452821
)
(Ribosomal protein L7A/L8 family protein.)
genome : 65,662,211 - 65,663,005 (795)
query : 1 - 795 (795/795)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9, E.R._mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128305)
HIX0171164
HIT000549880 (
ENST00000451946
)
(Hypothetical short protein.)
genome : 65,796,105 - 65,797,040 (936)
query : 1 - 622 (622/622)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171164)
HIX0170351
HIT000641459_02 (
ENST00000542414
)
(Hypothetical protein.)
genome : 65,928,715 - 65,929,452 (738)
query : 1 - 738 (738/738)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170351)
HIX0170351
HIT000510910 (
ENST00000412976
)
(BRCT domain containing protein.)
genome : 65,928,720 - 65,930,611 (1,892)
query : 1 - 1,892 (1,892/1,892)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, nucl 8, mito 6, extr 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170351)
HIX0170351
HIT000710861_02 (
ENST00000599100
)
(BRCT domain containing protein.)
genome : 65,929,796 - 65,930,611 (816)
query : 1 - 754 (754/754)
2 exons
identity = 0.999
3'(1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 5, mito 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170351)
HIX0170351
HIT000590652_02 (
ENST00000486925
)
(BRCT domain containing protein.)
genome : 65,930,211 - 65,930,760 (550)
query : 2 - 551 (550/574)
1 exon
identity = 0.971
3'(0.971)5'
coverage = 0.958
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170351)
HIX0219086
HIT000398386 (
NM_032776
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,926,989 - 65,225,722 (298,734)
query : 1 - 8,739 (8,739/8,762)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219086)
HIX0219086
HIT000482353 (
ENST00000399262
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,926,981 - 65,225,641 (298,661)
query : 1 - 8,666 (8,666/8,666)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219086)
HIX0219086
HIT000482343 (
ENST00000399251
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,926,990 - 65,225,722 (298,733)
query : 1 - 8,536 (8,536/8,536)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219086)
HIX0219086
HIT000394787
(
EF068222
)
Representative transcript
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C;)
genome : 64,926,990 - 65,225,641 (298,652)
query : 1 - 8,734 (8,734/8,734)
28 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;0.902;0.987)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219086)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB047888
Mus
sp. (Mouse) : AK173162
Gallus
sp. (Chicken) : CR385346
Pongo
sp. (Orangutan) : CR858245
Monodelphis
sp. (Opossum) : ENSMODT00000021831
Oryzias
sp. (Medaka) : ENSORLT00000018245
Tetraodon
sp. (Tetraodon) : GSTENT00008138001
Takifugu
sp. (Fugu) : SINFRUT00000140778
Pan
sp. (Chimpanzee) : XM_001166111
Bos
sp. (Cow) : XM_001249360
Equus
sp. (Horse) : XM_001917585
Danio
sp. (Zebrafish) : XM_681650
Canis
sp. (Dog) : XM_854117
HIX0219086
HIT000010552
(
AK027280
)
(Probable JmjC domain-containing histone demethylation protein 2C; EC=1.14.11.-; Jumonji domain-containing protein 1C; Thyroid receptor-interacting protein 8; TR-interacting protein 8; TRIP-8;)
genome : 64,974,647 - 65,225,606 (250,960)
query : 1 - 1,464 (1,464/1,464)
8 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219086)
HIX0219104
HIT000315360 (
NM_001001330
)
(TB2/DP1/HVA22-related protein family protein.)
genome : 65,281,123 - 65,384,883 (103,761)
query : 1 - 5,205 (5,205/5,205)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 6, extr 6, extr_plas 6, E.R. 4, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219104)
HIX0219104
HIT000355038 (
ENST00000373758
)
(TB2/DP1/HVA22-related protein family protein.)
genome : 65,281,123 - 65,384,883 (103,761)
query : 1 - 5,205 (5,205/5,205)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 6, extr 6, extr_plas 6, E.R. 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219104)
HIX0219104
HIT000115025 (
ENST00000298249
)
(TB2/DP1/HVA22-related protein family protein.)
genome : 65,281,123 - 65,384,881 (103,759)
query : 1 - 5,203 (5,203/5,203)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 6, extr 6, extr_plas 6, E.R. 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219104)
HIX0219104
HIT000306959
(
CR936686
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,381,947 - 65,384,334 (2,388)
query : 1 - 2,389 (2,389/2,407)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219104)
HIX0191519
pHIT000017561 ( pHIT000017561 )
Representative transcript
(Hypothetical protein.)
genome : 64,488,641 - 64,524,399 (35,759)
query : 1 - 384 (384/384)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0191519)
CAGE tag :
H05BB18O1304,H05BD59N0902,H05BD90L0503
H08BA60E1208,H10BB03M1905
HIX0115018
pHIT000017566 ( pHIT000017566 )
Representative transcript
(Conserved hypothetical protein.)
genome : 64,576,392 - 64,576,691 (300)
query : 1 - 300 (300/300)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115018)
CAGE tag :
H06BA99L1202,H08BA05H0407,H08BA10K2110
HIX0190686
pHIT000083585 ( pHIT000083585 )
(Hypothetical protein.)
genome : 64,578,174 - 64,638,744 (60,571)
query : 1 - 744 (744/744)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190686)
CAGE tag :
H06BA99L1202,H08BA05H0407,H08BA10K2110
HIX0190686
pHIT000109044 ( pHIT000109044 )
Representative transcript
(Hypothetical protein.)
genome : 64,578,360 - 64,670,985 (92,626)
query : 1 - 600 (600/600)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190686)
CAGE tag :
T10F03D45C7E
HIX0190686
pHIT000083002 ( pHIT000083002 )
(Hypothetical protein.)
genome : 64,578,360 - 64,640,631 (62,272)
query : 1 - 486 (486/486)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190686)
CAGE tag :
H06BA51L2203,H08BA09M1801,H08BA16N2201
H08BA43A0707,H08BA47G1307
HIX0218885
pHIT000083474 ( pHIT000083474 )
(Conserved hypothetical protein.)
genome : 65,214,809 - 65,282,218 (67,410)
query : 1 - 870 (870/870)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218885)
CAGE tag :
H05BA54F2003,H05BD12N2407,H06BA72O1702
H08BA26B1001,H08BA38I0508
AC067751.7
64500001-64550273 F +
NCBI
AL133417.11
64550274-64625545 F +
NCBI
AL357125.22
64625546-64740493 F +
NCBI
AL583888.9
64740494-64753753 F +
NCBI
AL590502.12
64753754-64929336 F +
NCBI
AL713895.8
64929337-64981364 F +
NCBI
AL607128.8
64981365-65113606 F +
NCBI
AC022022.10
65113607-65295210 F +
NCBI
AL607062.10
65295211-65381420 F +
NCBI
AC022387.8
65381421-65565239 F -
NCBI
AC069543.5
65565240-65610222 F +
NCBI
AC044782.6
65610223-65759263 F -
NCBI
AC012558.9
65759264-65819132 F +
NCBI
AC018977.9
65819133-66039947 F +
NCBI
AC027670.6
66039948-66100000 F +
NCBI