bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0019753
HIT000435583
(
BC146791
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,345 (611,846)
query : 1 - 6,864 (6,864/6,881)
35 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000310661 (
ENST00000356711
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,355 (611,856)
query : 1 - 6,874 (6,874/6,874)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000366858 (
NM_015011
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,355 (611,856)
query : 1 - 6,874 (6,874/6,874)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000000582
(
AB020672
)
Representative transcript
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,248,500 - 109,860,345 (611,846)
query : 1 - 6,864 (6,864/6,864)
35 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY004215
Mus
sp. (Mouse) : BC082311
Equus
sp. (Horse) : ENSECAT00000007296
Oryzias
sp. (Medaka) : ENSORLT00000022516
Pongo
sp. (Orangutan) : ENSPPYT00000006510
Tetraodon
sp. (Tetraodon) : GSTENT00026008001
Takifugu
sp. (Fugu) : SINFRUT00000159679
Macaca
sp. (Macaque) : XM_001085293
Monodelphis
sp. (Opossum) : XM_001375684
Danio
sp. (Zebrafish) : XM_001920923
Pan
sp. (Chimpanzee) : XM_509728
Canis
sp. (Dog) : XM_542665
Bos
sp. (Cow) : XR_027581
HIX0019753
HIT000029177
(
AL834447
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,248,530 - 109,701,313 (452,784)
query : 1 - 3,529 (3,529/3,598)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000409104
(
AB290159
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,281,570 - 109,860,345 (578,776)
query : 1 - 7,427 (7,427/7,427)
35 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000656368 (
NM_001198950
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,281,571 - 109,860,355 (578,785)
query : 1 - 7,436 (7,436/7,436)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000047679_03
(
AK127806
)
(Unconventional myosin-XVI isoform 1.)
genome : 109,281,571 - 109,704,826 (423,256)
query : 1 - 3,674 (3,674/3,676)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;0.995;1.000;0.989)3'
coverage = 0.999
InterPro :
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000311386 (
ENST00000357550
)
(Unconventional myosin-XVI; Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; Unconventional myosin-16;)
genome : 109,318,231 - 109,860,341 (542,111)
query : 1 - 6,775 (6,775/6,775)
34 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000106094 (
ENST00000251041
)
(Unconventional myosin-XVI isoform 1.)
genome : 109,318,231 - 109,701,313 (383,083)
query : 1 - 3,475 (3,475/3,492)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000572241 (
ENST00000467639
)
(Conserved hypothetical protein.)
genome : 109,431,890 - 109,438,088 (6,199)
query : 1 - 617 (617/617)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000357137 (
ENST00000375857
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,445,864 - 109,708,405 (262,542)
query : 1 - 3,121 (3,121/3,121)
22 exons
identity = 0.999
5'(1.000;0.977;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000020546
(
AK095691
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,445,928 - 109,708,405 (262,478)
query : 1 - 3,117 (3,117/3,117)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000586709 (
ENST00000482793
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,507,644 - 109,540,825 (33,182)
query : 1 - 475 (475/475)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000497557
(
AK302933
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,538,495 - 109,780,039 (241,545)
query : 1 - 2,955 (2,955/2,955)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
GO :
0003774 : Molecular Function : motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0019753
HIT000555445 (
ENST00000457511
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,538,517 - 109,780,039 (241,523)
query : 1 - 2,933 (2,933/2,933)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0171950
HIT000510743 (
ENST00000412809
)
(Hypothetical short protein.)
genome : 109,753,609 - 109,754,267 (659)
query : 1 - 436 (436/436)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, mito 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171950)
HIX0172173
HIT000727092 (
NR_047700
)
(Hypothetical short protein.)
genome : 109,816,253 - 109,819,651 (3,399)
query : 1 - 547 (547/564)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, cyto 9.5, nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172173)
HIX0172173
HIT000537233 (
ENST00000439299
)
(Hypothetical short protein.)
genome : 109,816,250 - 109,853,831 (37,582)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, cyto 9.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172173)
HIX0019753
HIT000096624
(
BC041343
)
(Unconventional myosin-XVI isoform 2.)
genome : 109,856,577 - 109,859,748 (3,172)
query : 1 - 3,172 (3,172/3,187)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019753)
HIX0172291
HIT000553421 (
ENST00000455487
)
(Hypothetical short protein.)
genome : 109,934,321 - 109,940,081 (5,761)
query : 1 - 698 (698/698)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172291)
HIX0172117
HIT000530509 (
ENST00000432575
)
(Conserved hypothetical protein.)
genome : 109,962,483 - 109,964,121 (1,639)
query : 1 - 664 (664/664)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172117)
HIX0172169
HIT000536942 (
ENST00000439008
)
(Conserved hypothetical protein.)
genome : 110,053,043 - 110,053,988 (946)
query : 1 - 414 (414/414)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172169)
HIX0171978
HIT000514024 (
ENST00000416090
)
(Hypothetical protein.)
genome : 110,380,629 - 110,382,354 (1,726)
query : 1 - 474 (474/474)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171978)
HIX0037302
HIT000339661
(
BC110638
)
(Conserved hypothetical protein.)
genome : 110,406,190 - 110,407,851 (1,662)
query : 1 - 1,666 (1,666/1,706)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000072145
(
AF161416
)
(Conserved hypothetical protein.)
genome : 110,406,190 - 110,407,613 (1,424)
query : 1 - 1,429 (1,429/1,457)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000316977 (
NM_003749
)
(Insulin receptor substrate 2; IRS-2;)
genome : 110,406,185 - 110,438,914 (32,730)
query : 1 - 6,997 (6,997/7,014)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000260974
(
BC063516
)
(Conserved hypothetical protein.)
genome : 110,406,185 - 110,407,891 (1,707)
query : 1 - 1,712 (1,712/1,726)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10.5, mito 8, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000097383
(
BC042858
)
(Conserved hypothetical protein.)
genome : 110,406,189 - 110,407,861 (1,673)
query : 1 - 1,679 (1,679/1,696)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000065930
(
AF073310
)
Representative transcript
(Insulin receptor substrate 2; IRS-2;)
genome : 110,406,184 - 110,438,915 (32,732)
query : 1 - 6,996 (6,996/6,996)
2 exons
identity = 0.993
3'(0.992;0.994)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
IPR002404 : Insulin receptor substrate-1, PTB
GO :
0005158 : Molecular Function : insulin receptor binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF050159
Mus
sp. (Mouse) : AK155277
Canis
sp. (Dog) : ENSCAFT00000009800
Oryzias
sp. (Medaka) : ENSORLT00000005046
Oryzias
sp. (Medaka) : ENSORLT00000009819
Tetraodon
sp. (Tetraodon) : GSTENT00019601001
Takifugu
sp. (Fugu) : SINFRUT00000162223
Monodelphis
sp. (Opossum) : XM_001375228
Equus
sp. (Horse) : XM_001916942
Gallus
sp. (Chicken) : XM_425588
Pan
sp. (Chimpanzee) : XM_529580
Danio
sp. (Zebrafish) : XM_690205
Danio
sp. (Zebrafish) : XM_695654
Macaca
sp. (Macaque) : XR_010470
Bos
sp. (Cow) : XR_028274
HIX0037302
HIT000357136 (
ENST00000375856
)
(Insulin receptor substrate 2; IRS-2;)
genome : 110,406,184 - 110,438,915 (32,732)
query : 1 - 6,999 (6,999/6,999)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000528656 (
ENST00000430722
)
(Conserved hypothetical protein.)
genome : 110,407,168 - 110,407,615 (448)
query : 1 - 444 (444/444)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000091168
(
BC026044
)
(Hypothetical protein.)
genome : 110,407,573 - 110,434,430 (26,858)
query : 1 - 1,126 (1,126/1,155)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 8.5, E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000262247
(
BC066356
)
(Hypothetical protein.)
genome : 110,407,573 - 110,408,657 (1,085)
query : 20 - 1,105 (1,086/1,120)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.983
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 8.5, E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037302
HIT000087846
(
BC012414
)
(Hypothetical protein.)
genome : 110,407,573 - 110,408,402 (830)
query : 1 - 831 (831/840)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito 8.5, E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037302)
HIX0037374
HIT000065792
(
AF070625
)
Representative transcript
(Conserved hypothetical protein.)
genome : 110,637,212 - 110,638,912 (1,701)
query : 11 - 1,711 (1,701/1,728)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037374)
HIX0171941
HIT000509624 (
ENST00000411690
)
(Hypothetical short protein.)
genome : 110,705,632 - 110,707,299 (1,668)
query : 1 - 437 (437/437)
4 exons
identity = 0.995
5'(1.000;0.968;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171941)
HIX0011452
HIT000018728
(
AK093862
)
Representative transcript
(Conserved hypothetical protein.)
genome : 110,775,555 - 110,777,581 (2,027)
query : 1 - 2,027 (2,027/2,027)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6.5, cyto_nucl 6.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011452)
AL512648.21
109200001-109256481 F +
NCBI
AL157771.11
109256482-109369624 F +
NCBI
AL136132.15
109369625-109543362 F -
NCBI
AL390918.7
109543363-109626812 F +
NCBI
AL353143.14
109626813-109796988 F +
NCBI
AL161431.28
109796989-109940690 F +
NCBI
AL583848.9
109940691-110011117 F +
NCBI
AL160031.9
110011118-110120408 F +
NCBI
AL163541.13
110120409-110312613 F +
NCBI
AL162497.20
110312614-110455922 F +
NCBI
AL355810.10
110455923-110559571 F +
NCBI
AL354947.8
110559572-110572979 F +
NCBI
AL355974.19
110572980-110704182 F +
NCBI
AL390755.5
110704183-110800000 F +
NCBI