bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0059181
HIT000333307
(
AY956767
)
Representative transcript
(Heat shock protein HSP 90-beta; HSP 90; Heat shock 84 kDa; HSP 84; HSP84;)
genome : 97,536,096 - 97,542,067 (5,972)
query : 1 - 1,086 (1,086/1,086)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001404 : Heat shock protein Hsp90 family
IPR020568 : Ribosomal protein S5 domain 2-type fold
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0006950 : Biological Process : response to stress
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17.3333, cyto_pero 13.8333,
nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059181)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000006460
Pan
sp. (Chimpanzee) : ENSPTRT00000060121
Macaca
sp. (Macaque) : XR_010483
HIX0059181
HIT000539987 (
ENST00000442053
)
(Heat shock protein HSP 90-beta; HSP 90; Heat shock 84 kDa; HSP 84; HSP84;)
genome : 97,536,096 - 97,542,067 (5,972)
query : 1 - 1,086 (1,086/1,086)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17.3333, cyto_pero 13.8333,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059181)
HIX0059181
HIT000524354 (
ENST00000426420
)
(Heat shock protein HSP 90-beta; HSP 90; Heat shock 84 kDa; HSP 84; HSP84;)
genome : 97,536,096 - 97,538,075 (1,980)
query : 1 - 1,980 (1,980/1,980)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.5, nucl 8, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059181)
HIX0130929
HIT000727312 (
NR_051966
)
(Hypothetical short protein.)
genome : 97,593,535 - 97,636,426 (42,892)
query : 1 - 734 (734/734)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0130929
HIT000540256 (
ENST00000442322
)
(Tubby, C-terminal domain containing protein.)
genome : 97,593,535 - 97,600,517 (6,983)
query : 1 - 789 (789/789)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0130929
HIT000551187 (
ENST00000453253
)
(Conserved hypothetical protein.)
genome : 97,599,891 - 97,601,181 (1,291)
query : 1 - 1,291 (1,291/1,291)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 9.5, mito_nucl 7.5, nucl 4.5, plas 2,
extr 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0130881
HIT000458790
(
DQ592259
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,599,983 - 97,600,013 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130881)
HIX0130929
HIT000460410
(
DQ593879
)
(Non-protein coding transcript.)
genome : 97,600,090 - 97,600,119 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0130664
HIT000439670
(
DQ573139
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,600,105 - 97,600,134 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130664)
HIX0130929
HIT000456383
(
DQ589852
)
(Non-protein coding transcript.)
genome : 97,600,133 - 97,600,162 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0130929
HIT000464365
(
DQ597834
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,600,209 - 97,600,240 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0130558
HIT000465186
(
DQ598655
)
(Non-protein coding transcript.)
genome : 97,600,212 - 97,600,241 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130558)
HIX0130558
HIT000447645
(
DQ581114
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,600,219 - 97,600,249 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130558)
HIX0037332
HIT000091838
(
BC029533
)
Representative transcript
(Tubby-related protein 3; Tubby-like protein 3;)
genome : 97,600,272 - 97,601,838 (1,567)
query : 2 - 1,225 (1,224/1,239)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10, mito 7, extr 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037332)
HIX0037332
HIT000440720
(
DQ574189
)
(Non-protein coding transcript.)
genome : 97,600,362 - 97,600,392 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037332)
HIX0130727
HIT000446120
(
DQ579589
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,600,426 - 97,600,455 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130727)
HIX0130929
HIT000459581
(
DQ593050
)
(Non-protein coding transcript.)
genome : 97,600,472 - 97,600,501 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130929)
HIX0037332
HIT000262080
(
BC065840
)
(Tubby-related protein 3; Tubby-like protein 3;)
genome : 97,600,573 - 97,601,838 (1,266)
query : 1 - 1,266 (1,266/1,298)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 3.33333, cyto 2,
cyto_pero 1.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037332)
HIX0211187
HIT000615748 (
ENST00000516345
)
(Non-protein coding transcript.)
genome : 97,618,195 - 97,618,268 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211187)
HIX0026548
HIT000042512
(
AK122639
)
Representative transcript
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,637,973 - 97,646,604 (8,632)
query : 1 - 2,285 (2,285/2,285)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK142510
Rattus
sp. (Rat) : AY191367
Canis
sp. (Dog) : ENSCAFT00000038917
Oryzias
sp. (Medaka) : ENSORLT00000004426
Pongo
sp. (Orangutan) : ENSPPYT00000006461
Tetraodon
sp. (Tetraodon) : GSTENT00024817001
Takifugu
sp. (Fugu) : SINFRUT00000159316
Macaca
sp. (Macaque) : XM_001087088
Monodelphis
sp. (Opossum) : XM_001377251
Equus
sp. (Horse) : XM_001490473
Gallus
sp. (Chicken) : XM_425594
Bos
sp. (Cow) : XM_586409
Danio
sp. (Zebrafish) : XM_692784
HIX0026548
HIT000115076 (
ENST00000298440
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,637,973 - 97,646,604 (8,632)
query : 1 - 2,285 (2,285/2,285)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000211954 (
NM_080818
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,637,973 - 97,646,604 (8,632)
query : 1 - 2,285 (2,285/2,285)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000246925
(
AJ305372
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,638,766 - 97,640,030 (1,265)
query : 1 - 1,265 (1,265/1,265)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000383483
(
AB065877
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,638,800 - 97,640,213 (1,414)
query : 1 - 1,414 (1,414/1,414)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000337433
(
BC103881
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,638,894 - 97,640,030 (1,137)
query : 1 - 1,137 (1,137/1,137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000337434
(
BC103882
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,638,894 - 97,640,030 (1,137)
query : 1 - 1,137 (1,137/1,137)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000337435
(
BC103883
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,638,894 - 97,640,030 (1,137)
query : 1 - 1,137 (1,137/1,137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000078547
(
AF370886
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,638,940 - 97,640,031 (1,092)
query : 1 - 1,092 (1,092/1,092)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000432550
(
AK313684
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,000 - 97,646,623 (7,624)
query : 8 - 1,312 (1,305/1,312)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000642502 (
ENST00000543457
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,000 - 97,646,623 (7,624)
query : 1 - 1,305 (1,305/1,305)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000383566
(
AB083598
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,000 - 97,640,013 (1,014)
query : 1 - 1,014 (1,014/1,014)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000384038
(
AF411109
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,000 - 97,640,013 (1,014)
query : 1 - 1,014 (1,014/1,014)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000721365
(
JQ308179
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,000 - 97,640,013 (1,014)
query : 1 - 1,014 (1,014/1,014)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000640563 (
ENST00000541518
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,807 - 97,646,984 (7,178)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, cyto 6, mito 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0026548
HIT000640083 (
ENST00000541038
)
(2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;)
genome : 97,639,827 - 97,646,730 (6,904)
query : 1 - 643 (643/643)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, mito 6, cyto 5, lyso 3, E.R._mito 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026548)
HIX0037494
HIT000094159
(
BC035899
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,647,642 - 97,649,889 (2,248)
query : 1 - 2,249 (2,249/2,310)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037494)
HIX0037300
HIT000306732
(
CR749802
)
(Muscleblind-like protein 2 isoform 1.)
genome : 97,794,090 - 98,046,374 (252,285)
query : 1 - 4,556 (4,556/4,571)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0172283
HIT000551796 (
ENST00000453862
)
(Hypothetical short protein.)
genome : 97,824,723 - 97,831,876 (7,154)
query : 1 - 692 (692/692)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172283)
HIX0011413
HIT000008598
(
AK025324
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,842,076 - 97,844,456 (2,381)
query : 1 - 2,382 (2,382/2,398)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011413)
HIX0037300
HIT000480875 (
ENST00000397601
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,873,688 - 98,046,374 (172,687)
query : 1 - 4,487 (4,487/4,487)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000212976 (
NM_144778
)
(Muscleblind-like protein 2 isoform 1.)
genome : 97,874,550 - 98,046,374 (171,825)
query : 1 - 4,728 (4,728/4,755)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 8, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000320317 (
NM_207304
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,550 - 98,046,374 (171,825)
query : 1 - 4,597 (4,597/4,624)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000081645
(
AK074610
)
(Hypothetical protein.)
genome : 97,874,572 - 97,876,882 (2,311)
query : 1 - 2,312 (2,312/2,312)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 7.16667, cyto 7, cyto_pero 5.66667,
extr 5, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000136230 (
ENST00000343600
)
(Muscleblind-like protein 2 isoform 1.)
genome : 97,874,574 - 98,046,373 (171,800)
query : 1 - 4,572 (4,572/4,572)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000424524
(
AK291727
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,603 - 98,043,813 (169,211)
query : 1 - 1,983 (1,983/1,983)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000064961
(
AF061261
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,608 - 98,044,262 (169,655)
query : 1 - 2,577 (2,577/2,595)
10 exons
identity = 0.992
5'(1.000;0.997;1.000;1.000;0.943;0.944;1.000;
1.000;1.000;0.997)3'
coverage = 0.993
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000080689
(
AF491866
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,609 - 98,046,374 (171,766)
query : 1 - 4,679 (4,679/4,720)
9 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;0.991)3'
coverage = 0.999
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000307150 (
ENST00000345429
)
(Muscleblind-like protein 2 isoform 1.)
genome : 97,874,609 - 98,046,374 (171,766)
query : 1 - 4,669 (4,669/4,669)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000357953 (
ENST00000376673
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,609 - 98,046,374 (171,766)
query : 1 - 4,574 (4,574/4,574)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000574217 (
ENST00000469707
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,609 - 98,044,262 (169,654)
query : 1 - 2,574 (2,574/2,574)
10 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;0.943;0.944;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000092653
(
BC032426
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,619 - 97,999,300 (124,682)
query : 1 - 1,554 (1,554/1,554)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000337590
(
BC104038
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,622 - 98,044,241 (169,620)
query : 1 - 2,392 (2,392/2,392)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000337591
(
BC104039
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,622 - 98,044,241 (169,620)
query : 1 - 2,428 (2,428/2,428)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000337592
(
BC104040
)
Representative transcript
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,622 - 98,044,241 (169,620)
query : 1 - 2,523 (2,523/2,523)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AY566276
Mus
sp. (Mouse) : BC079898
Bos
sp. (Cow) : BC142520
Pongo
sp. (Orangutan) : CR860190
Macaca
sp. (Macaque) : DQ148041
Gallus
sp. (Chicken) : EF363024
Danio
sp. (Zebrafish) : EF463081
Monodelphis
sp. (Opossum) : ENSMODT00000010860
Oryzias
sp. (Medaka) : ENSORLT00000006826
Tetraodon
sp. (Tetraodon) : GSTENT00027165001
Rattus
sp. (Rat) : XM_001075009
Pan
sp. (Chimpanzee) : XM_001141210
Equus
sp. (Horse) : XM_001916159
Canis
sp. (Dog) : XM_853840
HIX0037300
HIT000434710
(
AK315844
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,626 - 98,043,739 (169,114)
query : 1 - 1,885 (1,885/1,885)
7 exons
identity = 0.999
5'(0.994;0.999;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000090110
(
BC020418
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,874,726 - 97,999,308 (124,583)
query : 1 - 1,455 (1,455/1,455)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0130697
HIT000443919
(
DQ577388
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,888,538 - 97,888,568 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130697)
HIX0130710
HIT000445150
(
DQ578619
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,889,043 - 97,889,072 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130710)
HIX0130816
HIT000454289
(
DQ587758
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,889,548 - 97,889,577 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130816)
HIX0130788
HIT000451579
(
DQ585048
)
Representative transcript
(Non-protein coding transcript.)
genome : 97,894,259 - 97,894,288 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130788)
HIX0037300
HIT000090119
(
BC020430
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,928,197 - 97,999,308 (71,112)
query : 1 - 1,084 (1,084/1,084)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000084434
(
AY101770
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 97,928,415 - 98,043,815 (115,401)
query : 1 - 1,273 (1,273/1,273)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000499323
(
AK304699
)
(Muscleblind-like protein 2 isoform 3.)
genome : 97,928,458 - 98,043,867 (115,410)
query : 1 - 817 (817/817)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000543595 (
ENST00000445661
)
(Muscleblind-like protein 2 isoform 3.)
genome : 97,928,458 - 98,043,867 (115,410)
query : 1 - 817 (817/817)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037421
HIT000077962
(
AF339810
)
Representative transcript
(Hypothetical short protein.)
genome : 97,932,804 - 97,934,305 (1,502)
query : 7 - 1,508 (1,502/1,525)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, nucl 1, mito 1, lyso 1, golg 1,
mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037421)
HIX0021057
HIT000013454
(
AK056840
)
Representative transcript
(Conserved hypothetical protein.)
genome : 97,940,923 - 97,942,936 (2,014)
query : 1 - 2,014 (2,014/2,014)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 9, E.R._mito 9, mito_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021057)
HIX0037416
HIT000077952
(
AF339800
)
Representative transcript
(Hypothetical short protein.)
genome : 97,978,939 - 97,979,815 (877)
query : 3 - 878 (876/896)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 11, cyto_nucl 10, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037416)
HIX0037403
HIT000077920
(
AF339768
)
Representative transcript
(Tigger transposable element-derived protein 1.)
genome : 98,004,238 - 98,006,294 (2,057)
query : 8 - 2,074 (2,067/2,091)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11.5, mito_pero 6.5, nucl 2.5,
cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037403)
HIX0037300
HIT000547218 (
ENST00000449284
)
(Muscleblind-like protein 2;)
genome : 98,009,050 - 98,043,853 (34,804)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 10, cyto 8, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000077984
(
AF339832
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 98,009,735 - 98,011,527 (1,793)
query : 25 - 1,817 (1,793/1,831)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.987
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr_plas 12, extr 9, nucl 3, cyto 3,
cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000070018
(
AF116683
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 98,009,735 - 98,045,064 (35,330)
query : 13 - 1,656 (1,644/1,656)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, extr 8, cyto 8,
cyto_pero 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000263850
(
BC069699
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 98,009,736 - 98,044,330 (34,595)
query : 1 - 909 (909/909)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6, nucl 5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037300
HIT000263868
(
BC069717
)
(Muscleblind-like protein 2; Muscleblind-like protein 1; Muscleblind-like protein-like; Muscleblind-like protein-like 39;)
genome : 98,009,736 - 98,044,330 (34,595)
query : 1 - 909 (909/909)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6, nucl 5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0130606
HIT000347008 (
ENST00000365420
)
(Non-protein coding transcript.)
genome : 98,015,226 - 98,015,355 (130)
query : 1 - 130 (130/130)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130606)
HIX0037300
HIT000077934
(
AF339782
)
(Hypothetical short protein.)
genome : 98,044,708 - 98,046,374 (1,667)
query : 1 - 1,667 (1,667/1,694)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito_pero 3.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037300)
HIX0037427
HIT000077970
(
AF339818
)
Representative transcript
(Hypothetical short protein.)
genome : 98,076,556 - 98,077,604 (1,049)
query : 6 - 1,054 (1,049/1,071)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037427)
HIX0037465
HIT000257353
(
AY726569
)
Representative transcript
(Hypothetical short protein.)
genome : 98,084,326 - 98,086,084 (1,759)
query : 1 - 1,759 (1,759/1,774)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 8, cyto_nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037465)
HIX0037306
HIT000430068
(
AK311202
)
(Ras-like protein 1; Precursor;)
genome : 98,084,654 - 98,117,616 (32,963)
query : 1 - 1,231 (1,231/1,231)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000052541
(
BC041333
)
(Ras-related protein Rap-2a; RbBP-30; Precursor;)
genome : 98,086,476 - 98,120,244 (33,769)
query : 3 - 4,353 (4,351/4,370)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000208183 (
NM_021033
)
(Small GTPase superfamily protein.)
genome : 98,086,475 - 98,120,252 (33,778)
query : 1 - 4,358 (4,358/4,358)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000105516 (
ENST00000245304
)
(Small GTPase superfamily protein.)
genome : 98,086,476 - 98,121,382 (34,907)
query : 1 - 5,487 (5,487/5,487)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000434005
(
AK315139
)
(Small GTPase superfamily protein.)
genome : 98,086,688 - 98,116,696 (30,009)
query : 11 - 598 (588/598)
2 exons
identity = 0.993
5'(0.989;1.000)3'
coverage = 0.983
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000073863
(
AF205602
)
Representative transcript
(Ras-related protein Rap-2a; RbBP-30; Precursor;)
genome : 98,086,708 - 98,120,243 (33,536)
query : 1 - 2,920 (2,920/2,943)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY037826
Mus
sp. (Mouse) : BC067194
Pongo
sp. (Orangutan) : CR859503
Oryzias
sp. (Medaka) : ENSORLT00000006833
Oryzias
sp. (Medaka) : ENSORLT00000022118
Tetraodon
sp. (Tetraodon) : GSTENT00026108001
Takifugu
sp. (Fugu) : SINFRUT00000139350
Gallus
sp. (Chicken) : XM_001233103
Danio
sp. (Zebrafish) : XM_001343305
Monodelphis
sp. (Opossum) : XM_001377153
Equus
sp. (Horse) : XM_001916509
Pan
sp. (Chimpanzee) : XM_509705
Canis
sp. (Dog) : XM_534168
Bos
sp. (Cow) : XM_863890
HIX0037306
HIT000263989
(
BC070031
)
(Ras-related protein Rap-2a; RbBP-30; Precursor;)
genome : 98,086,719 - 98,120,243 (33,525)
query : 3 - 4,106 (4,104/4,121)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000321313
(
X12534
)
(Small GTPase superfamily protein.)
genome : 98,086,722 - 98,116,696 (29,975)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000581041 (
ENST00000476869
)
(Small GTPase superfamily protein.)
genome : 98,086,725 - 98,116,964 (30,240)
query : 1 - 903 (903/903)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 6.5, extr 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000080762
(
AF493914
)
(Small GTPase superfamily protein.)
genome : 98,086,725 - 98,116,696 (29,972)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR020849 : Small GTPase superfamily, Ras type
GO :
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007264 : Biological Process : small GTPase mediated signal transduction
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 8.5, E.R._mito 6.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000090583
(
BC022356
)
(Conserved hypothetical protein.)
genome : 98,117,010 - 98,117,956 (947)
query : 1 - 947 (947/1,015)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5.5, cyto_nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000019441
(
AK094586
)
(Conserved hypothetical protein.)
genome : 98,117,165 - 98,120,242 (3,078)
query : 2 - 3,080 (3,079/3,080)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000015400
(
AK090533
)
(Conserved hypothetical protein.)
genome : 98,117,950 - 98,120,242 (2,293)
query : 1 - 2,294 (2,294/2,294)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000098625
(
BC047495
)
(Conserved hypothetical protein.)
genome : 98,118,771 - 98,120,243 (1,473)
query : 1 - 1,474 (1,474/1,489)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0037306
HIT000077949
(
AF339797
)
(Hypothetical short protein.)
genome : 98,120,656 - 98,121,311 (656)
query : 12 - 667 (656/684)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037306)
HIX0211142
eHIT000004053 ( ESTsASS_13_414 )
Representative transcript
(Non-protein coding transcript.)
genome : 98,191,868 - 98,202,386 (10,519)
query : 1 - 592 (592/592)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211142)
ESTs used for assembly :
AA926858,CR744215
HIX0172159
HIT000535268 (
ENST00000437334
)
(Hypothetical protein.)
genome : 98,327,265 - 98,330,217 (2,953)
query : 1 - 692 (692/692)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 28, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172159)
HIX0172202
HIT000541344 (
ENST00000443410
)
(Conserved hypothetical protein.)
genome : 98,553,907 - 98,554,542 (636)
query : 1 - 636 (636/636)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172202)
HIX0011415
HIT000581740 (
ENST00000477600
)
(Conserved hypothetical protein.)
genome : 98,605,742 - 98,634,812 (29,071)
query : 1 - 439 (439/439)
6 exons
identity = 0.995
5'(1.000;0.965;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, nucl 7, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000565013 (
ENST00000460070
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,605,912 - 98,637,876 (31,965)
query : 1 - 544 (544/544)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000586567 (
ENST00000482642
)
(Conserved hypothetical protein.)
genome : 98,605,912 - 98,622,159 (16,248)
query : 1 - 724 (724/724)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000585426 (
ENST00000481455
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,605,929 - 98,637,808 (31,880)
query : 1 - 555 (555/555)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto_nucl 7, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000576302 (
ENST00000471898
)
(Armadillo-like helical domain containing protein.)
genome : 98,605,937 - 98,637,726 (31,790)
query : 1 - 556 (556/556)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 18, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000567964 (
ENST00000463157
)
(Armadillo-like helical domain containing protein.)
genome : 98,605,937 - 98,637,713 (31,777)
query : 1 - 493 (493/493)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11.5, nucl 8.5, extr 7, mito 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000593932 (
ENST00000490369
)
(Conserved hypothetical protein.)
genome : 98,605,937 - 98,634,823 (28,887)
query : 1 - 542 (542/542)
6 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;0.994;0.940)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000596726 (
ENST00000493281
)
(Conserved hypothetical protein.)
genome : 98,605,937 - 98,634,804 (28,868)
query : 1 - 544 (544/544)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000592675 (
ENST00000489058
)
(Conserved hypothetical protein.)
genome : 98,605,948 - 98,629,046 (23,099)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000585655 (
ENST00000481689
)
(Armadillo-like helical domain containing protein.)
genome : 98,605,968 - 98,637,745 (31,778)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 7, cyto 3, extr 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000584615 (
ENST00000480611
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,606,180 - 98,637,801 (31,622)
query : 1 - 591 (591/591)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 19, cyto_nucl 6, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000589238 (
ENST00000485433
)
(Armadillo-like helical domain containing protein.)
genome : 98,606,213 - 98,634,838 (28,626)
query : 1 - 524 (524/524)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10.5, cyto 10.5, extr 6, mito 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000599693 (
ENST00000496368
)
(Armadillo-like helical domain containing protein.)
genome : 98,612,446 - 98,637,743 (25,298)
query : 1 - 542 (542/542)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000519795 (
ENST00000421861
)
(Armadillo-like helical domain containing protein.)
genome : 98,612,472 - 98,637,769 (25,298)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, nucl 10, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000579661 (
ENST00000475420
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,627,885 - 98,642,424 (14,540)
query : 1 - 883 (883/883)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16.5, nucl 5.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000584644 (
ENST00000480641
)
(Armadillo-like helical domain containing protein.)
genome : 98,628,719 - 98,641,363 (12,645)
query : 1 - 543 (543/543)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 10, extr 7, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000600553 (
ENST00000497270
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,628,929 - 98,641,353 (12,425)
query : 1 - 536 (536/536)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, nucl 5, mito 3, cysk 3,
extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000504607 (
ENST00000403772
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,628,957 - 98,642,756 (13,800)
query : 1 - 547 (547/547)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0011415
HIT000577906 (
ENST00000473582
)
(Importin-beta, N-terminal domain containing protein.)
genome : 98,632,124 - 98,642,464 (10,341)
query : 1 - 536 (536/536)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, extr 3, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011415)
HIX0172231
HIT000544704 (
ENST00000446770
)
(Ferritin-like superfamily domain containing protein.)
genome : 98,639,204 - 98,639,470 (267)
query : 1 - 267 (267/267)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172231)
HIX0220851
HIT000574964 (
ENST00000470493
)
(Armadillo-like helical domain containing protein.)
genome : 98,645,404 - 98,653,176 (7,773)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 9, mito 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220851)
HIX0026617
HIT000056538
(
BX647891
)
Representative transcript
(Conserved hypothetical protein.)
genome : 98,647,466 - 98,652,539 (5,074)
query : 19 - 2,481 (2,463/2,519)
2 exons
identity = 0.991
3'(0.991;0.992)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026617)
HIX0220763
HIT000044904
(
AK125031
)
Representative transcript
(Armadillo-like helical domain containing protein.)
genome : 98,653,900 - 98,674,757 (20,858)
query : 1 - 3,688 (3,688/3,688)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 6.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000595076 (
ENST00000491555
)
(Armadillo-like helical domain containing protein.)
genome : 98,653,900 - 98,674,757 (20,858)
query : 1 - 3,688 (3,688/3,688)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 6.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000583782 (
ENST00000479736
)
(Armadillo-like helical domain containing protein.)
genome : 98,654,730 - 98,658,579 (3,850)
query : 1 - 668 (668/668)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 14, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000596927 (
ENST00000493492
)
(Armadillo-like helical domain containing protein.)
genome : 98,655,263 - 98,660,396 (5,134)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000085930
(
BC000947
)
(Armadillo-like helical domain containing protein.)
genome : 98,667,819 - 98,674,735 (6,917)
query : 1 - 1,593 (1,593/1,608)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 8, mito 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000573176 (
ENST00000468620
)
(Armadillo-like helical domain containing protein.)
genome : 98,670,840 - 98,672,195 (1,356)
query : 1 - 480 (480/480)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000596575 (
ENST00000493122
)
(Armadillo-like helical domain containing protein.)
genome : 98,671,833 - 98,673,665 (1,833)
query : 1 - 651 (651/651)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 8, cyto_nucl 8, mito 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000328508
(
AB074173
)
(Hypothetical short protein.)
genome : 98,674,417 - 98,676,535 (2,119)
query : 1 - 2,010 (2,010/2,025)
2 exons
identity = 0.996
5'(0.999;0.987)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0220763
HIT000077986
(
AF339834
)
(Hypothetical short protein.)
genome : 98,674,537 - 98,676,535 (1,999)
query : 9 - 2,007 (1,999/2,022)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220763)
HIX0171849
HIT000315500 (
NM_001001715
)
(Conserved hypothetical protein.)
genome : 98,795,434 - 98,897,558 (102,125)
query : 1 - 1,321 (1,321/1,321)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000712391 (
ENST00000600648
)
(Hypothetical short protein.)
genome : 98,795,434 - 98,811,855 (16,422)
query : 1 - 423 (423/433)
2 exons
identity = 0.998
5'(1.000;0.991)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0019215
HIT000038061
(
BC017585
)
Representative transcript
(RING finger protein 113A; Zinc finger protein 183;)
genome : 98,828,039 - 98,829,519 (1,481)
query : 3 - 1,378 (1,376/1,393)
2 exons
identity = 0.997
3'(0.992;0.999)5'
coverage = 0.999
InterPro :
IPR000571 : Zinc finger, CCCH-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019215)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AY363107
Danio
sp. (Zebrafish) : AY363112
Equus
sp. (Horse) : ENSECAT00000004544
Pongo
sp. (Orangutan) : ENSPPYT00000006472
Macaca
sp. (Macaque) : XM_001089736
Pan
sp. (Chimpanzee) : XM_522704
HIX0019215
HIT000039920
(
BC025388
)
(RING finger protein 113A; Zinc finger protein 183;)
genome : 98,828,039 - 98,829,509 (1,471)
query : 6 - 1,371 (1,366/1,386)
2 exons
identity = 0.997
3'(0.992;0.999)5'
coverage = 0.996
InterPro :
IPR000571 : Zinc finger, CCCH-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019215)
HIX0019215
HIT000318215 (
NM_178861
)
(RING finger protein 113A; Zinc finger protein 183;)
genome : 98,828,039 - 98,829,521 (1,483)
query : 1 - 1,378 (1,378/1,381)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019215)
HIX0019215
HIT000081452
(
AF539427
)
(RING finger protein 113A; Zinc finger protein 183;)
genome : 98,828,037 - 98,829,502 (1,466)
query : 1 - 1,361 (1,361/1,361)
2 exons
identity = 0.996
3'(0.995;0.997)5'
coverage = 1.000
InterPro :
IPR000571 : Zinc finger, CCCH-type
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019215)
HIX0019215
HIT000110140 (
ENST00000267291
)
(RING finger protein 113A; Zinc finger protein 183;)
genome : 98,828,039 - 98,829,519 (1,481)
query : 1 - 1,376 (1,376/1,376)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019215)
HIX0019215
HIT000448376
(
DQ581845
)
(Non-protein coding transcript.)
genome : 98,828,540 - 98,828,571 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019215)
HIX0171849
HIT000710158 (
ENST00000598389
)
(Ezrin/radixin/moesin like family protein.)
genome : 98,830,071 - 99,037,098 (207,028)
query : 1 - 747 (747/747)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0211203
HIT000659393 (
NR_036129
)
(Non-protein coding transcript.)
genome : 98,860,778 - 98,860,854 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211203)
HIX0211203
HIT000694589 (
ENST00000582699
)
(Non-protein coding transcript.)
genome : 98,860,778 - 98,860,854 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211203)
HIX0171849
HIT000261723
(
BC065020
)
Representative transcript
(Conserved hypothetical protein.)
genome : 98,865,469 - 98,897,557 (32,089)
query : 15 - 1,026 (1,012/1,043)
2 exons
identity = 0.997
5'(0.995;0.998)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000357861 (
ENST00000376581
)
(Conserved hypothetical protein.)
genome : 98,865,469 - 98,897,558 (32,090)
query : 9 - 1,021 (1,013/1,021)
2 exons
identity = 0.999
5'(0.995;1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0037407
HIT000077924
(
AF339772
)
Representative transcript
(Hypothetical protein.)
genome : 98,885,904 - 98,886,950 (1,047)
query : 1 - 1,047 (1,047/1,063)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037407)
HIX0037407
HIT000707789 (
ENST00000595998
)
(Hypothetical protein.)
genome : 98,885,904 - 98,886,954 (1,051)
query : 1 - 1,051 (1,051/1,051)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037407)
HIX0037414
HIT000077950
(
AF339798
)
Representative transcript
(Conserved hypothetical protein.)
genome : 98,888,592 - 98,889,252 (661)
query : 1 - 661 (661/674)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, nucl 5, cyto_mito 5, cyto_pero 5,
cyto_plas 5, cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037414)
HIX0171849
HIT000713100 (
ENST00000601361
)
(Hypothetical short protein.)
genome : 98,980,445 - 98,996,066 (15,622)
query : 1 - 457 (457/457)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000707608 (
ENST00000595817
)
(FERM, N-terminal domain containing protein.)
genome : 98,980,482 - 99,037,085 (56,604)
query : 1 - 778 (778/778)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, mito 4, nucl 2.5,
mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000525338 (
ENST00000427404
)
(Hypothetical short protein.)
genome : 98,980,972 - 98,985,492 (4,521)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 5, E.R. 4, cyto_nucl 4, nucl 3.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000707173 (
ENST00000595380
)
(FERM central domain containing protein.)
genome : 98,981,032 - 99,040,732 (59,701)
query : 1 - 616 (616/616)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16.5, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000708255 (
ENST00000596467
)
(Ezrin/radixin/moesin like family protein.)
genome : 98,981,032 - 99,038,249 (57,218)
query : 1 - 799 (799/799)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, mito 12, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000711782 (
ENST00000600032
)
(FERM, N-terminal domain containing protein.)
genome : 98,981,032 - 99,037,086 (56,055)
query : 1 - 810 (810/810)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, mito 4, nucl 2.5,
mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000713590 (
ENST00000601853
)
(FERM, N-terminal domain containing protein.)
genome : 98,981,032 - 99,034,794 (53,763)
query : 1 - 749 (749/749)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 11, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000708401 (
ENST00000596613
)
(FERM, N-terminal domain containing protein.)
genome : 98,981,032 - 99,030,172 (49,141)
query : 1 - 856 (856/856)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000710115 (
ENST00000598346
)
(Conserved hypothetical protein.)
genome : 98,981,032 - 98,991,133 (10,102)
query : 1 - 756 (756/756)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000713904 (
ENST00000602171
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,991,133 (10,102)
query : 1 - 518 (518/518)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000714005 (
ENST00000602272
)
(Conserved hypothetical protein.)
genome : 98,981,032 - 98,991,012 (9,981)
query : 1 - 784 (784/784)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000708333 (
ENST00000596545
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,986,603 (5,572)
query : 1 - 781 (781/781)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000707160 (
ENST00000595366
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,985,492 (4,461)
query : 1 - 709 (709/709)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 5, E.R. 4, cyto_nucl 4, nucl 3.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000713499 (
ENST00000601762
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,985,489 (4,458)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 5, E.R. 4, cyto_nucl 4, nucl 3.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000710911 (
ENST00000599151
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,985,134 (4,103)
query : 1 - 641 (641/641)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000710462 (
ENST00000598698
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,985,125 (4,094)
query : 1 - 786 (786/786)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000713749 (
ENST00000602015
)
(Hypothetical short protein.)
genome : 98,981,032 - 98,982,238 (1,207)
query : 1 - 576 (576/576)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000713393 (
ENST00000601656
)
(Conserved hypothetical protein.)
genome : 98,981,032 - 98,982,008 (977)
query : 1 - 806 (806/806)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, mito 9, cyto_nucl 8.83333, nucl 6.5, cyto 6,
cyto_pero 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000712873 (
ENST00000601133
)
(FERM, N-terminal domain containing protein.)
genome : 98,981,034 - 98,997,864 (16,831)
query : 1 - 612 (612/612)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9.5, cyto_nucl 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000705799 (
ENST00000593990
)
(Hypothetical short protein.)
genome : 98,981,037 - 98,985,415 (4,379)
query : 1 - 871 (871/871)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, nucl 2, mito 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000706458 (
ENST00000594657
)
(Hypothetical short protein.)
genome : 98,981,039 - 98,986,022 (4,984)
query : 1 - 767 (767/767)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000555365 (
ENST00000457431
)
(Hypothetical short protein.)
genome : 98,981,134 - 98,985,492 (4,359)
query : 1 - 748 (748/748)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 5, E.R. 4, cyto_nucl 4, nucl 3.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0220873
HIT000709028 (
ENST00000597248
)
(Non-protein coding transcript.)
genome : 98,981,909 - 98,985,490 (3,582)
query : 1 - 508 (508/508)
2 exons
identity = 0.986
3'(1.000;0.977)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220873)
HIX0171849
HIT000710803 (
ENST00000599040
)
(FERM, N-terminal domain containing protein.)
genome : 98,984,012 - 99,038,008 (53,997)
query : 1 - 555 (555/555)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000713996 (
ENST00000602263
)
(FERM, N-terminal domain containing protein.)
genome : 98,992,943 - 99,038,020 (45,078)
query : 1 - 867 (867/867)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000712751 (
ENST00000601009
)
(FERM central domain containing protein.)
genome : 99,030,075 - 99,041,947 (11,873)
query : 1 - 667 (667/667)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000705360 (
ENST00000593548
)
(FERM central domain containing protein.)
genome : 99,035,860 - 99,038,020 (2,161)
query : 1 - 764 (764/764)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_plas 9, cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0171849
HIT000593950 (
ENST00000490389
)
(FERM central domain containing protein.)
genome : 99,036,615 - 99,038,040 (1,426)
query : 1 - 604 (604/604)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171849)
HIX0220876
HIT000711935 (
ENST00000600190
)
(FERM adjacent (FA) domain containing protein.)
genome : 99,042,839 - 99,047,674 (4,836)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 4, nucl 3, cyto 1.5, cyto_pero 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220876)
HIX0037433
HIT000077982
(
AF339830
)
Representative transcript
(Hypothetical short protein.)
genome : 99,049,415 - 99,050,152 (738)
query : 10 - 747 (738/766)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, cyto_nucl 3.83333, cyto_pero 2.83333,
nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037433)
HIX0220737
HIT000054452
(
BX537667
)
Representative transcript
(Hypothetical short protein.)
genome : 99,051,540 - 99,059,747 (8,208)
query : 1 - 8,251 (8,251/8,275)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10.5, nucl 8.5, cyto 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220737)
HIX0220737
HIT000708368 (
ENST00000596580
)
(Hypothetical short protein.)
genome : 99,051,540 - 99,059,748 (8,209)
query : 1 - 8,209 (8,209/8,209)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10.5, nucl 8.5, cyto 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220737)
HIX0220737
HIT000599393 (
ENST00000496052
)
(Dbl homology (DH) domain containing protein.)
genome : 99,056,325 - 99,064,231 (7,907)
query : 1 - 407 (407/407)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220737)
HIX0220737
HIT000008957
(
AK025683
)
(Hypothetical short protein.)
genome : 99,057,291 - 99,059,747 (2,457)
query : 1 - 2,456 (2,456/2,477)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10.5, nucl 8.5, cyto 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220737)
HIX0220737
HIT000077969
(
AF339817
)
(Hypothetical short protein.)
genome : 99,058,267 - 99,059,747 (1,481)
query : 1 - 1,479 (1,479/1,502)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220737)
HIX0220737
HIT000554963 (
ENST00000457029
)
(Dbl homology (DH) domain containing protein.)
genome : 99,061,666 - 99,077,752 (16,087)
query : 1 - 476 (476/476)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220737)
HIX0011417
HIT000008615
(
AK025341
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,067,897 - 99,069,710 (1,814)
query : 4 - 1,817 (1,814/1,843)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 11, cyto 9.5, nucl 5.5,
E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011417)
HIX0220762
HIT000520997 (
ENST00000423063
)
(Dbl homology (DH) domain containing protein.)
genome : 99,083,297 - 99,088,355 (5,059)
query : 1 - 764 (764/764)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, mito 8, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220762)
HIX0220762
HIT000708045 (
ENST00000596256
)
(Dbl homology (DH) domain containing protein.)
genome : 99,083,335 - 99,093,050 (9,716)
query : 1 - 744 (744/744)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220762)
HIX0220762
HIT000043438
(
AK123565
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,083,411 - 99,087,251 (3,841)
query : 1 - 3,871 (3,871/3,871)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220762)
HIX0220762
HIT000709553 (
ENST00000597777
)
(Conserved hypothetical protein.)
genome : 99,083,411 - 99,087,251 (3,841)
query : 1 - 3,841 (3,841/3,841)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220762)
HIX0172113
HIT000530163 (
ENST00000432229
)
(Conserved hypothetical protein.)
genome : 99,087,659 - 99,088,094 (436)
query : 1 - 323 (323/323)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172113)
HIX0220756
HIT000020602
(
AK095747
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,097,407 - 99,100,098 (2,692)
query : 1 - 2,696 (2,696/2,696)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_plas 7.16667, plas 7, cyto 7, mito 6,
extr_plas 5, mito_pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220756)
HIX0220756
HIT000706152 (
ENST00000594346
)
(Conserved hypothetical protein.)
genome : 99,097,407 - 99,100,098 (2,692)
query : 1 - 2,692 (2,692/2,692)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, mito 7, plas 6, mito_nucl 6, nucl 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220756)
HIX0220895
HIT000199186 (
NM_002271
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,605,929 - 98,676,550 (70,622)
query : 1 - 6,002 (6,002/6,019)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, cysk 8, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000108029 (
ENST00000261574
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,605,929 - 98,676,551 (70,623)
query : 1 - 6,003 (6,003/6,003)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, cysk 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000052954
(
BC045640
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,605,948 - 98,674,136 (68,189)
query : 1 - 3,569 (3,569/3,592)
29 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, cysk 8, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000325484
(
Y08890
)
Representative transcript
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,606,373 - 98,675,330 (68,958)
query : 46 - 4,790 (4,745/4,826)
28 exons
identity = 0.996
5'(0.975;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.987)3'
coverage = 0.991
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, cysk 8, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168361
Mus
sp. (Mouse) : AF294327
Danio
sp. (Zebrafish) : BC142883
Gallus
sp. (Chicken) : BX935446
Pongo
sp. (Orangutan) : CR859567
Oryzias
sp. (Medaka) : ENSORLT00000007714
Rattus
sp. (Rat) : ENSRNOT00000014859
Tetraodon
sp. (Tetraodon) : GSTENT00007135001
Takifugu
sp. (Fugu) : SINFRUT00000165332
Pan
sp. (Chimpanzee) : XM_001140931
Monodelphis
sp. (Opossum) : XM_001377082
Equus
sp. (Horse) : XM_001492682
Canis
sp. (Dog) : XM_542647
HIX0220895
HIT000311430 (
ENST00000357602
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,612,503 - 98,674,743 (62,241)
query : 1 - 4,335 (4,335/4,335)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000056869
(
BX648222
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,628,886 - 98,674,136 (45,251)
query : 1 - 3,418 (3,418/3,425)
26 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;0.982;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13.5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000594227 (
ENST00000490680
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,628,886 - 98,674,136 (45,251)
query : 1 - 3,419 (3,419/3,419)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000498118
(
AK303494
)
(Ran-binding protein 6; RanBP6;)
genome : 98,628,929 - 98,674,131 (45,203)
query : 1 - 2,996 (2,996/2,996)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000638685 (
ENST00000539640
)
(Ran-binding protein 6; RanBP6;)
genome : 98,628,929 - 98,674,131 (45,203)
query : 1 - 2,996 (2,996/2,996)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000384416
(
AK225286
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,628,932 - 98,674,735 (45,804)
query : 1 - 3,972 (3,972/3,993)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000030454
(
BC001497
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,628,949 - 98,674,131 (45,183)
query : 1 - 3,351 (3,351/3,388)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000089900
(
BC019309
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,628,949 - 98,674,131 (45,183)
query : 1 - 3,351 (3,351/3,388)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000221195
(
U72761
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,628,951 - 98,674,076 (45,126)
query : 1 - 3,294 (3,294/3,294)
26 exons
identity = 0.998
5'(0.989;1.000;0.995;1.000;1.000;1.000;1.000;
0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.965;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR001494 : Importin-beta, N-terminal domain
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0008536 : Molecular Function : Ran GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000497436
(
AK302812
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,629,217 - 98,674,282 (45,066)
query : 2 - 3,506 (3,505/3,506)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 7, cyto 3.5, extr_plas 3.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0220895
HIT000573884 (
ENST00000469360
)
(Importin-5; Imp5; Importin subunit beta-3; Karyopherin beta-3; Ran-binding protein 5; RanBP5;)
genome : 98,629,217 - 98,674,282 (45,066)
query : 1 - 3,505 (3,505/3,505)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 7, cyto 3.5, extr_plas 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220895)
HIX0021288
HIT000264421
(
BC071592
)
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,794,816 - 99,102,017 (307,202)
query : 1 - 4,917 (4,917/4,932)
28 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR001849 : Pleckstrin homology domain
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
HIX0021288
HIT000707230 (
ENST00000595437
)
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,794,816 - 99,102,027 (307,212)
query : 1 - 4,926 (4,926/4,926)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
HIX0021288
HIT000202431 (
NM_005766
)
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,795,434 - 99,102,022 (306,589)
query : 1 - 4,925 (4,925/5,028)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
HIX0021288
HIT000357866 (
ENST00000376586
)
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,795,434 - 99,102,016 (306,583)
query : 1 - 5,012 (5,012/5,012)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
HIX0021288
HIT000122104 (
ENST00000319562
)
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,795,505 - 99,102,023 (306,519)
query : 1 - 4,855 (4,855/4,855)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
HIX0021288
HIT000096781
(
BC041595
)
Representative transcript
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,795,505 - 99,100,696 (305,192)
query : 1 - 3,528 (3,528/3,546)
27 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR001849 : Pleckstrin homology domain
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC030329
Pongo
sp. (Orangutan) : CR859100
Danio
sp. (Zebrafish) : ENSDART00000065236
Oryzias
sp. (Medaka) : ENSORLT00000008007
Oryzias
sp. (Medaka) : ENSORLT00000022112
Pan
sp. (Chimpanzee) : ENSPTRT00000024359
Tetraodon
sp. (Tetraodon) : GSTENT00015798001
Tetraodon
sp. (Tetraodon) : GSTENT00026111001
Takifugu
sp. (Fugu) : SINFRUT00000175658
Takifugu
sp. (Fugu) : SINFRUT00000183114
Macaca
sp. (Macaque) : XM_001089334
Danio
sp. (Zebrafish) : XM_001343826
Monodelphis
sp. (Opossum) : XM_001366189
Equus
sp. (Horse) : XM_001490998
Rattus
sp. (Rat) : XM_224535
Canis
sp. (Dog) : XM_534170
Bos
sp. (Cow) : XM_610432
HIX0021288
HIT000058154
(
AB008430
)
(FERM, RhoGEF and pleckstrin domain-containing protein 1; Chondrocyte-derived ezrin-like protein; Pleckstrin homology domain-containing family C member 2; PH domain-containing family C member 2;)
genome : 98,795,722 - 99,100,827 (305,106)
query : 1 - 3,442 (3,442/3,442)
27 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR001849 : Pleckstrin homology domain
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021288)
HIX0211142
eHIT000004053 ( ESTsASS_13_414 )
Representative transcript
(Non-protein coding transcript.)
genome : 98,191,868 - 98,202,386 (10,519)
query : 1 - 592 (592/592)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211142)
ESTs used for assembly :
AA926858,CR744215
AL353581.14
97500001-97636922 F +
NCBI
AL356486.12
97636923-97702567 F +
NCBI
AL359925.9
97702568-97850655 F +
NCBI
AL161430.19
97850656-98007846 F +
NCBI
AL442067.16
98007847-98156143 F +
NCBI
AL160393.13
98156144-98215596 F +
NCBI
AL159151.56
98215597-98272712 F +
NCBI
AL359746.8
98272713-98311781 F +
NCBI
AL359502.14
98311782-98464892 F +
NCBI
AL445605.7
98464893-98510083 F +
NCBI
AL356580.13
98510084-98669155 F +
NCBI
AL137120.13
98669156-98697768 F +
NCBI
AL136300.22
98697769-98866684 F +
NCBI
AL445223.6
98866685-98951913 F +
NCBI
AL161896.16
98951914-99047996 F +
NCBI
AL137249.29
99047997-99100000 F +
NCBI