bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0039957
HIT000309617 (
ENST00000355481
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 38,924,339 - 39,078,204 (153,866)
query : 1 - 15,377 (15,377/15,377)
105 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000197575 (
NM_000540
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 38,924,340 - 39,078,204 (153,865)
query : 1 - 15,391 (15,391/15,391)
105 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000314278 (
ENST00000360985
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 38,924,340 - 39,078,204 (153,865)
query : 1 - 15,376 (15,376/15,376)
104 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.964;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000397645 (
NM_001042723
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 38,924,340 - 39,078,204 (153,865)
query : 1 - 15,376 (15,376/15,376)
105 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000191318
(
J05200
)
Representative transcript
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 38,924,363 - 39,078,202 (153,840)
query : 1 - 15,346 (15,346/15,346)
105 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR000699 : RIH (RyR and IP3R Homology) domain
IPR001870 : B30.2/SPRY domain
IPR003032 : Ryanodine receptor Ryr
IPR003877 : SPRY domain
IPR005821 : Ion transport domain
IPR009460 : Ryanodine Receptor TM 4-6
IPR011992 : EF-hand domain pair
IPR013333 : Ryanodine receptor
IPR013662 : RyR/IP3R Homology associated domain
IPR014821 : Inositol 1,4,5-trisphosphate/ryanodine receptor
IPR015925 : Ryanodine receptor-related
IPR016093 : MIR motif
GO :
0005216 : Molecular Function : ion channel activity
0005219 : Molecular Function : ryanodine-sensitive calcium-release channel activity
0005262 : Molecular Function : calcium channel activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006874 : Biological Process : cellular calcium ion homeostasis
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF130879
Mus
sp. (Mouse) : AY268935
Equus
sp. (Horse) : DQ318132
Canis
sp. (Dog) : ENSCAFT00000009509
Monodelphis
sp. (Opossum) : ENSMODT00000016922
Oryzias
sp. (Medaka) : ENSORLT00000001305
Oryzias
sp. (Medaka) : ENSORLT00000008002
Pongo
sp. (Orangutan) : ENSPPYT00000011559
Pan
sp. (Chimpanzee) : ENSPTRT00000045610
Tetraodon
sp. (Tetraodon) : GSTENT00019016001
Takifugu
sp. (Fugu) : SINFRUT00000159464
Takifugu
sp. (Fugu) : SINFRUT00000169416
HIX0039957
HIT000313099 (
ENST00000359596
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 38,924,470 - 39,078,060 (153,591)
query : 1 - 15,117 (15,117/15,117)
105 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000329360
(
AB209425
)
(Ryanodine receptor 1 isoform 2.)
genome : 38,986,854 - 39,055,868 (69,015)
query : 3 - 6,266 (6,264/6,266)
49 exons
identity = 0.998
5'(1.000;1.000;0.984;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011992 : EF-hand domain pair
IPR013662 : RyR/IP3R Homology associated domain
IPR015925 : Ryanodine receptor-related
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8.16667, cyto_pero 7.33333,
nucl 6.5, pero 4, mito 3.5, E.R._mito 3.5, lyso 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000706141 (
ENST00000594335
)
(Ryanodine receptor 1 isoform 2.)
genome : 38,986,855 - 39,055,868 (69,014)
query : 1 - 6,263 (6,263/6,263)
49 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8.16667, cyto_pero 7.33333,
nucl 6.5, pero 4, mito 3.5, E.R._mito 3.5, lyso 3, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000488409
(
AK293785
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 39,002,211 - 39,025,814 (23,604)
query : 2 - 2,201 (2,200/2,201)
18 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;0.952;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000)3'
coverage = 1.000
InterPro :
IPR015925 : Ryanodine receptor-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 11, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000711301 (
ENST00000599547
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 39,002,211 - 39,025,814 (23,604)
query : 1 - 2,200 (2,200/2,200)
18 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.952;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11, mito 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000712081 (
ENST00000600337
)
(Non-protein coding transcript.)
genome : 39,013,707 - 39,014,228 (522)
query : 1 - 421 (421/421)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0226564
HIT000708797 (
ENST00000597015
)
(Conserved hypothetical protein.)
genome : 39,017,594 - 39,019,195 (1,602)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226564)
HIX0039957
HIT000713251 (
ENST00000601514
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 39,018,730 - 39,026,702 (7,973)
query : 1 - 863 (863/863)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, mito_nucl 11.5, nucl 10.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000708219 (
ENST00000596431
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 39,025,372 - 39,029,313 (3,942)
query : 1 - 515 (515/515)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 10, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0039957
HIT000705140 (
ENST00000593322
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 39,025,400 - 39,039,012 (13,613)
query : 1 - 843 (843/843)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0226526
HIT000707644 (
ENST00000595853
)
(Hypothetical short protein.)
genome : 39,026,157 - 39,027,768 (1,612)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226526)
HIX0039957
HIT000705488 (
ENST00000593677
)
(Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle calcium release channel; Skeletal muscle ryanodine receptor; Skeletal muscle-type ryanodine receptor; Type 1 ryanodine receptor;)
genome : 39,057,567 - 39,062,884 (5,318)
query : 1 - 432 (432/432)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039957)
HIX0040128
HIT000203694 (
NM_007181
)
(Mitogen-activated protein kinase kinase kinase kinase 1; EC=2.7.11.1; Hematopoietic progenitor kinase; MAPK/ERK kinase kinase kinase 1; MEK kinase kinase 1; MEKKK 1;)
genome : 39,078,281 - 39,108,643 (30,363)
query : 1 - 2,779 (2,779/2,786)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.3333, cyto 9.5,
cyto_mito 5.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000397611 (
NM_001042600
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,078,281 - 39,108,643 (30,363)
query : 1 - 2,681 (2,681/2,688)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.8333, cyto 8.5,
cyto_mito 5.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000220941
(
U66464
)
Representative transcript
(Mitogen-activated protein kinase kinase kinase kinase 1; EC=2.7.11.1; Hematopoietic progenitor kinase; MAPK/ERK kinase kinase kinase 1; MEK kinase kinase 1; MEKKK 1;)
genome : 39,078,281 - 39,108,564 (30,284)
query : 26 - 2,725 (2,700/2,732)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.988
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001180 : Citron-like
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005083 : Molecular Function : small GTPase regulator activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.3333, cyto 9.5,
cyto_mito 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK143215
Bos
sp. (Cow) : BC149646
Equus
sp. (Horse) : ENSECAT00000018399
Macaca
sp. (Macaque) : ENSMMUT00000030444
Oryzias
sp. (Medaka) : ENSORLT00000002479
Pongo
sp. (Orangutan) : ENSPPYT00000011560
Takifugu
sp. (Fugu) : SINFRUT00000173507
Rattus
sp. (Rat) : XM_001074916
Monodelphis
sp. (Opossum) : XM_001367639
Danio
sp. (Zebrafish) : XM_001921600
Canis
sp. (Dog) : XM_862399
Pan
sp. (Chimpanzee) : XR_021850
HIX0040128
HIT000703339 (
ENST00000591517
)
(Mitogen-activated protein kinase kinase kinase kinase 1; EC=2.7.11.1; Hematopoietic progenitor kinase; MAPK/ERK kinase kinase kinase 1; MEK kinase kinase 1; MEKKK 1;)
genome : 39,078,281 - 39,108,564 (30,284)
query : 1 - 2,700 (2,700/2,700)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.3333, cyto 9.5,
cyto_mito 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000705014 (
ENST00000593196
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,078,281 - 39,086,370 (8,090)
query : 1 - 443 (443/443)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12.5, nucl 10.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000698146 (
ENST00000586296
)
(Mitogen-activated protein kinase kinase kinase kinase 1; EC=2.7.11.1; Hematopoietic progenitor kinase; HPK; MAPK/ERK kinase kinase kinase 1; MEK kinase kinase 1; MEKKK 1;)
genome : 39,078,284 - 39,108,606 (30,323)
query : 1 - 1,363 (1,363/1,363)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 14, cyto_plas 8.33333,
cyto_mito 7.83333, mito_nucl 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000700970 (
ENST00000589130
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,078,286 - 39,109,522 (31,237)
query : 1 - 2,654 (2,654/2,654)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000480167 (
ENST00000396857
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,078,309 - 39,108,643 (30,335)
query : 1 - 2,653 (2,653/2,653)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.8333, cyto 8.5,
cyto_mito 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000703033 (
ENST00000591210
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,078,314 - 39,084,009 (5,696)
query : 1 - 232 (232/232)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 12, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000703743 (
ENST00000591921
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,078,340 - 39,100,274 (21,935)
query : 1 - 1,625 (1,625/1,625)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16.5, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000700778 (
ENST00000588938
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 2.)
genome : 39,083,911 - 39,087,733 (3,823)
query : 1 - 610 (610/610)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 5.5, nucl 5, mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0226339
HIT000701395 (
ENST00000589557
)
(Conserved hypothetical protein.)
genome : 39,086,986 - 39,092,334 (5,349)
query : 1 - 516 (516/516)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226339)
HIX0040128
HIT000497891
(
AK303267
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,087,988 - 39,104,567 (16,580)
query : 1 - 1,225 (1,225/1,225)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR001180 : Citron-like
GO :
0005083 : Molecular Function : small GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000521388 (
ENST00000423454
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,087,988 - 39,104,567 (16,580)
query : 1 - 1,225 (1,225/1,225)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000697439 (
ENST00000585583
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,087,988 - 39,104,567 (16,580)
query : 1 - 1,225 (1,225/1,225)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000700842 (
ENST00000589002
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,096,826 - 39,104,567 (7,742)
query : 1 - 557 (557/557)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 5.5, extr 5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000704706 (
ENST00000592888
)
(Mitogen-activated protein kinase kinase kinase kinase 3; EC=2.7.11.1; Germinal center kinase-related protein kinase; GLK; MAPK/ERK kinase kinase kinase 3; MEK kinase kinase 3; MEKKK 3;)
genome : 39,101,729 - 39,105,117 (3,389)
query : 1 - 588 (588/588)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000703529 (
ENST00000591707
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,101,740 - 39,105,138 (3,399)
query : 1 - 757 (757/757)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 4, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000704044 (
ENST00000592225
)
(Conserved hypothetical protein.)
genome : 39,104,683 - 39,105,513 (831)
query : 1 - 575 (575/575)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000699924 (
ENST00000588083
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,104,707 - 39,108,485 (3,779)
query : 1 - 545 (545/545)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, mito 8, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0040128
HIT000699144 (
ENST00000587300
)
(Mitogen-activated protein kinase kinase kinase kinase 1 isoform 1.)
genome : 39,106,818 - 39,108,609 (1,792)
query : 1 - 404 (404/404)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040128)
HIX0015096
HIT000204222 (
NM_013234
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,722 - 39,127,595 (17,874)
query : 1 - 879 (879/910)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000704967 (
ENST00000593149
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,735 - 39,127,593 (17,859)
query : 1 - 760 (760/760)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 6.5, extr 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000066213
(
AF077051
)
Representative transcript
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,737 - 39,127,593 (17,857)
query : 1 - 861 (861/911)
8 exons
identity = 0.995
5'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK004664
Bos
sp. (Cow) : BC102250
Tetraodon
sp. (Tetraodon) : CR717030
Danio
sp. (Zebrafish) : ENSDART00000043305
Oryzias
sp. (Medaka) : ENSORLT00000001195
Pongo
sp. (Orangutan) : ENSPPYT00000029336
Takifugu
sp. (Fugu) : SINFRUT00000150274
Rattus
sp. (Rat) : XM_001074873
Macaca
sp. (Macaque) : XM_001082764
Equus
sp. (Horse) : XM_001497212
Pan
sp. (Chimpanzee) : XM_512639
Canis
sp. (Dog) : XM_533679
HIX0015096
HIT000105853 (
ENST00000248342
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,737 - 39,127,595 (17,859)
query : 1 - 864 (864/864)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000001833
(
AF085358
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,737 - 39,127,593 (17,857)
query : 1 - 862 (862/863)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.985;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 4, E.R. 2, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000058582
(
AB019392
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,738 - 39,127,591 (17,854)
query : 1 - 859 (859/859)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000251181
(
AY245432
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,744 - 39,127,594 (17,851)
query : 1 - 856 (856/906)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.985)3'
coverage = 0.999
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000033298
(
BC007559
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,823 - 39,127,592 (17,770)
query : 1 - 775 (775/794)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000700774 (
ENST00000588934
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,826 - 39,127,592 (17,767)
query : 1 - 501 (501/501)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000493259
(
AK298635
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,826 - 39,126,125 (16,300)
query : 1 - 966 (966/966)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000637479 (
ENST00000538434
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,826 - 39,126,125 (16,300)
query : 1 - 966 (966/966)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000704880 (
ENST00000593062
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,826 - 39,121,608 (11,783)
query : 1 - 704 (704/704)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000698777 (
ENST00000586932
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,826 - 39,116,972 (7,147)
query : 1 - 667 (667/667)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, cyto 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000499957
(
AK316344
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,833 - 39,126,055 (16,223)
query : 5 - 1,002 (998/1,002)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.996
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000644218 (
ENST00000545173
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,833 - 39,126,384 (16,552)
query : 1 - 1,327 (1,327/1,327)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000495659
(
AK301035
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,834 - 39,126,085 (16,252)
query : 1 - 1,027 (1,027/1,027)
7 exons
identity = 0.998
5'(1.000;0.990;1.000;0.987;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000701146 (
ENST00000589307
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; eIF-3 p25;)
genome : 39,109,834 - 39,121,460 (11,627)
query : 1 - 538 (538/538)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000422351
(
AK289554
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,836 - 39,127,594 (17,759)
query : 1 - 764 (764/764)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000703232 (
ENST00000591409
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,836 - 39,125,742 (15,907)
query : 1 - 583 (583/583)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000698359 (
ENST00000586513
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,836 - 39,119,208 (9,373)
query : 1 - 493 (493/493)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000700262 (
ENST00000588422
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; eIF-3 p25;)
genome : 39,109,836 - 39,116,832 (6,997)
query : 1 - 507 (507/507)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, cyto_nucl 9.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000242680
(
AF109355
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,848 - 39,127,594 (17,747)
query : 1 - 752 (752/771)
8 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000030083
(
BC001031
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,850 - 39,127,595 (17,746)
query : 1 - 751 (751/782)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000704376 (
ENST00000592558
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,109,851 - 39,127,593 (17,743)
query : 1 - 670 (670/670)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, mito 4, extr 2, pero 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000009805
(
AK026531
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,867 - 39,127,592 (17,726)
query : 1 - 732 (732/767)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000077142
(
AF315506
)
(Eukaryotic translation initiation factor 3 subunit K; eIF3k; Eukaryotic translation initiation factor 3 subunit 12; Muscle-specific gene M9 protein; PLAC-24; eIF-3 p25; eIF-3 p28;)
genome : 39,109,906 - 39,127,591 (17,686)
query : 1 - 691 (691/718)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR016020 : Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
0006446 : Biological Process : regulation of translational initiation
0043022 : Molecular Function : ribosome binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000700139 (
ENST00000588299
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,116,690 - 39,123,540 (6,851)
query : 1 - 524 (524/524)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, plas 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000086796
(
BC007335
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,116,692 - 39,127,592 (10,901)
query : 1 - 386 (386/408)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009374 : Eukaryotic translation initiation factor 3 subunit K
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0005852 : Cellular Component : eukaryotic translation initiation factor 3 complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 9, cysk 5, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015096
HIT000701969 (
ENST00000590134
)
(Eukaryotic translation initiation factor 3 subunit K.)
genome : 39,122,666 - 39,127,564 (4,899)
query : 1 - 711 (711/711)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11, extr 10, nucl 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015096)
HIX0015097
HIT000201648 (
NM_004924
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,267 - 39,221,171 (82,905)
query : 1 - 3,954 (3,954/3,966)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000428229
(
AK309363
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,289 - 39,212,518 (74,230)
query : 1 - 1,729 (1,729/1,729)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
IPR018159 : Spectrin/alpha-actinin
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000700458 (
ENST00000588618
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,289 - 39,212,518 (74,230)
query : 1 - 1,729 (1,729/1,729)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000220066
(
U48734
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,310 - 39,220,737 (82,428)
query : 3 - 3,474 (3,472/3,474)
21 exons
identity = 0.981
5'(0.975;0.991;0.959;1.000;0.989;1.000;1.000;
1.000;0.912;0.991;0.986;0.980;1.000;0.972;
0.984;0.978;0.983;0.993;0.975;0.962;0.982)3'
coverage = 0.999
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018159 : Spectrin/alpha-actinin
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000106350 (
ENST00000252699
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,310 - 39,222,223 (83,914)
query : 1 - 4,963 (4,963/4,963)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000055745
(
BX647098
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,327 - 39,220,770 (82,444)
query : 1 - 1,884 (1,884/1,904)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
0.999)3'
coverage = 0.999
InterPro :
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR014837 : EF-hand, Ca insensitive
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 9, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000499178
(
AK304554
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,327 - 39,220,730 (82,404)
query : 1 - 2,171 (2,171/2,171)
14 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000522168 (
ENST00000424234
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,327 - 39,220,072 (81,746)
query : 1 - 1,625 (1,625/1,625)
11 exons
identity = 0.997
5'(1.000;1.000;0.956;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000494579
(
AK299955
)
(Alpha-actinin-3; Alpha-actinin skeletal muscle isoform 3; F-actin cross-linking protein;)
genome : 39,138,327 - 39,216,500 (78,174)
query : 1 - 1,419 (1,419/1,419)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
GO :
0003779 : Molecular Function : actin binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000032172
(
BC005033
)
Representative transcript
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,373 - 39,220,731 (82,359)
query : 1 - 3,408 (3,408/3,504)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR014837 : EF-hand, Ca insensitive
IPR018159 : Spectrin/alpha-actinin
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK145322
Rattus
sp. (Rat) : BC061788
Danio
sp. (Zebrafish) : BC066559
Bos
sp. (Cow) : BC140512
Pongo
sp. (Orangutan) : CR858192
Oryzias
sp. (Medaka) : ENSORLT00000001153
Tetraodon
sp. (Tetraodon) : GSTENT00012749001
Takifugu
sp. (Fugu) : SINFRUT00000167048
Macaca
sp. (Macaque) : XM_001083825
Monodelphis
sp. (Opossum) : XM_001362493
Canis
sp. (Dog) : XM_862351
Pan
sp. (Chimpanzee) : XR_025487
Equus
sp. (Horse) : XR_044565
HIX0015097
HIT000701366 (
ENST00000589528
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,378 - 39,220,771 (82,394)
query : 1 - 428 (428/441)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000396897 (
ENST00000390009
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,378 - 39,220,087 (81,710)
query : 1 - 2,102 (2,102/2,102)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000649104
(
GU987085
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,378 - 39,220,087 (81,710)
query : 1 - 2,102 (2,102/2,102)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR014837 : EF-hand, Ca insensitive
IPR018159 : Spectrin/alpha-actinin
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000102060
(
D89980
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,389 - 39,220,202 (81,814)
query : 10 - 2,873 (2,864/2,873)
21 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR014837 : EF-hand, Ca insensitive
IPR018159 : Spectrin/alpha-actinin
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000391941
(
DQ431186
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,138,386 - 39,220,072 (81,687)
query : 1 - 1,566 (1,566/1,566)
11 exons
identity = 0.997
5'(1.000;0.965;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001589 : Actinin-type actin-binding domain, conserved site
IPR001715 : Calponin homology domain
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR014837 : EF-hand, Ca insensitive
IPR018159 : Spectrin/alpha-actinin
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0003779 : Molecular Function : actin binding
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000598913 (
ENST00000495553
)
(Alpha-actinin-3 isoform 2.)
genome : 39,138,833 - 39,200,063 (61,231)
query : 1 - 586 (586/586)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015098
HIT000007030
(
AK023756
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,155,210 - 39,158,346 (3,137)
query : 1 - 3,138 (3,138/3,138)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, cyto 5, mito 4, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015098)
HIX0226239
HIT000697853 (
ENST00000585999
)
(Non-protein coding transcript.)
genome : 39,174,513 - 39,184,246 (9,734)
query : 1 - 242 (242/242)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226239)
HIX0015097
HIT000698384 (
ENST00000586538
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,198,782 - 39,207,956 (9,175)
query : 1 - 546 (546/546)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 6, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000593054 (
ENST00000489451
)
(Alpha-actinin-1; Alpha-actinin cytoskeletal isoform; F-actin cross-linking protein; Non-muscle alpha-actinin-1;)
genome : 39,201,473 - 39,207,757 (6,285)
query : 1 - 654 (654/654)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 10.6667, cyto_nucl 6.5, nucl 5.5,
extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0137947
HIT000468617
(
DQ866753
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,203,996 - 39,204,367 (372)
query : 1 - 372 (372/372)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137947)
HIX0015097
HIT000088751
(
BC015620
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,205,120 - 39,220,731 (15,612)
query : 1 - 2,565 (2,565/2,586)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR002017 : Spectrin repeat
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR014837 : EF-hand, Ca insensitive
IPR018159 : Spectrin/alpha-actinin
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 5, pero 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000327105
(
Z36797
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,205,166 - 39,208,696 (3,531)
query : 1 - 400 (400/400)
3 exons
identity = 0.970
5'(0.973;0.991;0.932)3'
coverage = 1.000
InterPro :
IPR002017 : Spectrin repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 5.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000538334 (
ENST00000440400
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,214,797 - 39,222,223 (7,427)
query : 1 - 3,180 (3,180/3,180)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.3333, cyto_pero 9.83333,
nucl 4.5, extr 3, mito 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000389545
(
BC127927
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,215,073 - 39,217,687 (2,615)
query : 5 - 409 (405/419)
3 exons
identity = 0.995
5'(0.985;1.000;1.000)3'
coverage = 0.967
InterPro :
IPR002017 : Spectrin repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 10.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000600901 (
ENST00000497637
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,218,496 - 39,220,460 (1,965)
query : 1 - 877 (877/877)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 14.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015097
HIT000581331 (
ENST00000477174
)
(Alpha-actinin-4; F-actin cross-linking protein; Non-muscle alpha-actinin 4;)
genome : 39,218,785 - 39,220,061 (1,277)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 6, cyto 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015099
HIT000095961
(
BC040022
)
(EF-hand domain pair containing protein.)
genome : 39,220,832 - 39,226,050 (5,219)
query : 1 - 1,041 (1,041/1,057)
6 exons
identity = 0.998
3'(0.999;1.000;1.000;0.987;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000706355 (
ENST00000594552
)
(EF-hand domain pair containing protein.)
genome : 39,220,827 - 39,226,050 (5,224)
query : 1 - 1,046 (1,046/1,046)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000709762 (
ENST00000597987
)
(EF-hand domain containing protein.)
genome : 39,220,914 - 39,226,045 (5,132)
query : 1 - 896 (896/896)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015097
HIT000443975
(
DQ577444
)
(Non-protein coding transcript.)
genome : 39,220,918 - 39,220,948 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015097)
HIX0015099
HIT000036477
(
BC014027
)
(Calpain-12.)
genome : 39,221,105 - 39,226,317 (5,213)
query : 1 - 1,111 (1,111/1,130)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;0.987;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9, mito_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000705511 (
ENST00000593700
)
(EF-hand domain pair containing protein.)
genome : 39,221,098 - 39,226,317 (5,220)
query : 1 - 1,118 (1,118/1,118)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000045586
(
AK125713
)
Representative transcript
(Calpain-12.)
genome : 39,221,174 - 39,227,631 (6,458)
query : 1 - 2,198 (2,198/2,198)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000709492 (
ENST00000597716
)
(EF-hand domain containing protein.)
genome : 39,221,174 - 39,227,631 (6,458)
query : 1 - 2,198 (2,198/2,198)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000706974 (
ENST00000595177
)
(EF-hand domain pair containing protein.)
genome : 39,221,318 - 39,226,062 (4,745)
query : 1 - 488 (488/488)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000709133 (
ENST00000597354
)
(EF-hand domain pair containing protein.)
genome : 39,221,808 - 39,226,264 (4,457)
query : 1 - 519 (519/519)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12.5, nucl 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000019562
(
AK094707
)
(Conserved hypothetical protein.)
genome : 39,223,761 - 39,226,312 (2,552)
query : 1 - 2,552 (2,552/2,552)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 13.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000713422 (
ENST00000601685
)
(Conserved hypothetical protein.)
genome : 39,223,761 - 39,226,312 (2,552)
query : 1 - 2,552 (2,552/2,552)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 13.5, cyto 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0015099
HIT000706300 (
ENST00000594497
)
(Conserved hypothetical protein.)
genome : 39,225,206 - 39,226,302 (1,097)
query : 1 - 526 (526/526)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015099)
HIX0017642
HIT000027808
(
AL832896
)
Representative transcript
(Calpain-12.)
genome : 39,228,924 - 39,230,503 (1,580)
query : 1 - 1,581 (1,581/1,600)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017642)
HIX0226734
HIT000713988 (
ENST00000602255
)
(Conserved hypothetical protein.)
genome : 39,228,924 - 39,230,503 (1,580)
query : 1 - 1,580 (1,580/1,580)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 8.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226734)
HIX0226132
HIT000710448 (
ENST00000598684
)
(Peptidase C2, calpain family protein.)
genome : 39,232,417 - 39,234,812 (2,396)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, cyto 9, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226132)
HIX0226132
HIT000709516 (
ENST00000597740
)
(Peptidase C2, calpain family protein.)
genome : 39,232,883 - 39,234,812 (1,930)
query : 1 - 547 (547/547)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, cyto_nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226132)
HIX0195866
HIT000359906_03 (
ENST00000378626
)
(Galectin, carbohydrate recognition domain containing protein.)
genome : 39,261,611 - 39,263,743 (2,133)
query : 7 - 466 (460/466)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195866)
HIX0195866
HIT000710798 (
ENST00000599035
)
(Galectin, carbohydrate recognition domain containing protein.)
genome : 39,262,524 - 39,264,072 (1,549)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10, cyto 9.5, cyto_pero 7.33333,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195866)
HIX0027526
HIT000199221 (
NM_002307
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,279,842 - 39,282,391 (2,550)
query : 1 - 494 (494/515)
4 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000191859_03
(
L07769
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,279,850 - 39,282,387 (2,538)
query : 2 - 483 (482/483)
4 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000397557 (
NM_001042507
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,279,850 - 39,282,394 (2,545)
query : 1 - 489 (489/506)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000260210
(
BC061588
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,279,851 - 39,282,387 (2,537)
query : 1 - 481 (481/524)
4 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000264974
(
BC073743
)
Representative transcript
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,279,851 - 39,282,389 (2,539)
query : 1 - 483 (483/519)
4 exons
identity = 0.998
5'(1.000;0.989;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF036941
Takifugu
sp. (Fugu) : SINFRUT00000180461
Macaca
sp. (Macaque) : XM_001083444
Monodelphis
sp. (Opossum) : XM_001367847
Pan
sp. (Chimpanzee) : XR_024797
HIX0027526
HIT000120347 (
ENST00000314980
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,279,851 - 39,282,389 (2,539)
query : 1 - 483 (483/483)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000217612
(
U06643
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,280,243 - 39,282,392 (2,150)
query : 23 - 498 (476/498)
3 exons
identity = 0.983
5'(0.931;1.000;0.994)3'
coverage = 0.956
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000267767
(
CR456917
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,280,256 - 39,282,329 (2,074)
query : 7 - 407 (401/411)
3 exons
identity = 0.998
5'(1.000;0.995;1.000)3'
coverage = 0.976
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000052755
(
BC042911
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,280,257 - 39,282,394 (2,138)
query : 1 - 465 (465/482)
3 exons
identity = 0.998
5'(0.989;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7.5, cyto 5.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0027526
HIT000712049 (
ENST00000600304
)
(Galectin-7; Gal-7; HKL-14; PI7; p53-induced gene 1 protein;)
genome : 39,281,168 - 39,282,388 (1,221)
query : 1 - 532 (532/532)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, mito 6, cyto 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027526)
HIX0015100
HIT000062293
(
AF014838
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,314 - 39,303,539 (11,226)
query : 1 - 1,075 (1,075/1,110)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.966)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000031679
(
BC003661
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,319 - 39,303,569 (11,251)
query : 1 - 1,100 (1,100/1,125)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000032246
(
BC005146
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,319 - 39,303,569 (11,251)
query : 1 - 1,100 (1,100/1,125)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000202764 (
NM_006149
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,311 - 39,303,740 (11,430)
query : 1 - 1,279 (1,279/1,291)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000051223
(
BC034750
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,319 - 39,303,565 (11,247)
query : 1 - 1,096 (1,096/1,112)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000707086 (
ENST00000595291
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,311 - 39,297,147 (4,837)
query : 1 - 691 (691/691)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 7.5, mito 5, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000423066
(
AK290269
)
Representative transcript
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,312 - 39,303,585 (11,274)
query : 1 - 1,123 (1,123/1,123)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC102444
Mus
sp. (Mouse) : EF017939
Equus
sp. (Horse) : ENSECAT00000023343
Macaca
sp. (Macaque) : ENSMMUT00000038521
Oryzias
sp. (Medaka) : ENSORLT00000001339
Pongo
sp. (Orangutan) : ENSPPYT00000011567
Pan
sp. (Chimpanzee) : ENSPTRT00000020277
Tetraodon
sp. (Tetraodon) : GSTENT00008763001
Rattus
sp. (Rat) : M73553
Takifugu
sp. (Fugu) : SINFRUT00000135415
Monodelphis
sp. (Opossum) : XM_001362582
Canis
sp. (Dog) : XM_850294
HIX0015100
HIT000221801
(
U82953
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,317 - 39,303,550 (11,234)
query : 1 - 1,078 (1,078/1,078)
10 exons
identity = 0.995
3'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000117742 (
ENST00000307751
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,319 - 39,304,004 (11,686)
query : 1 - 1,535 (1,535/1,535)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000058093
(
AB006781
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,319 - 39,303,582 (11,264)
query : 1 - 1,113 (1,113/1,113)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000711819 (
ENST00000600070
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,399 - 39,299,445 (7,047)
query : 1 - 661 (661/661)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 6.5, extr 6, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000099952
(
BT007032
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,405 - 39,303,526 (11,122)
query : 1 - 971 (971/972)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000268480
(
CR536544
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,404 - 39,303,526 (11,123)
query : 1 - 972 (972/972)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015533 : Galectin-4/6
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000707136 (
ENST00000595342
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,523 - 39,294,291 (1,769)
query : 1 - 413 (413/413)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 7.5, mito 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000491228
(
AK296604
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,983 - 39,303,585 (10,603)
query : 1 - 969 (969/969)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 12, nucl 11, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000708934 (
ENST00000597153
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,292,983 - 39,303,585 (10,603)
query : 1 - 969 (969/969)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 12, cyto 12, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000490818
(
AK296194
)
(Galectin-6; Gal-6;)
genome : 39,293,673 - 39,303,521 (9,849)
query : 1 - 1,332 (1,332/1,345)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000707073 (
ENST00000595278
)
(Galectin-6; Gal-6;)
genome : 39,293,673 - 39,303,521 (9,849)
query : 1 - 1,332 (1,332/1,345)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000708416 (
ENST00000596628
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,294,297 - 39,299,588 (5,292)
query : 1 - 491 (491/491)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000709579 (
ENST00000597803
)
(Galectin-4; Gal-4; Antigen NY-CO-27; L-36 lactose-binding protein; L36LBP; Lactose-binding lectin 4;)
genome : 39,297,101 - 39,303,585 (6,485)
query : 1 - 328 (328/328)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, mito 9, cyto_nucl 8.5, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015100
HIT000706016 (
ENST00000594209
)
(Conserved hypothetical protein.)
genome : 39,299,538 - 39,303,585 (4,048)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015100)
HIX0015101
HIT000088481
(
BC014786
)
(Crotonase superfamily protein.)
genome : 39,306,062 - 39,308,201 (2,140)
query : 25 - 839 (815/875)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.931
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 11, mito 4, extr 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015101)
HIX0015101
HIT000713072 (
ENST00000601333
)
(ClpP/crotonase-like domain containing protein.)
genome : 39,306,062 - 39,306,910 (849)
query : 1 - 710 (710/710)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015101)
HIX0015101
HIT000046439
(
AK126566
)
Representative transcript
(Crotonase superfamily protein.)
genome : 39,306,064 - 39,312,700 (6,637)
query : 1 - 3,660 (3,660/3,660)
7 exons
identity = 0.996
3'(1.000;1.000;1.000;0.986;0.997;0.993;0.995)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase superfamily
IPR014748 : Crontonase, C-terminal
IPR029045 : ClpP/crotonase-like domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015101)
HIX0015101
HIT000706197 (
ENST00000594391
)
(Crotonase superfamily protein.)
genome : 39,306,123 - 39,308,004 (1,882)
query : 1 - 919 (919/919)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015101)
HIX0226483
HIT000706361 (
ENST00000594558
)
(Conserved hypothetical protein.)
genome : 39,310,806 - 39,313,863 (3,058)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4.33333, nucl 4, cyto 2.5,
cyto_pero 2.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226483)
HIX0226103
HIT000707907 (
ENST00000596118
)
(ClpP/crotonase-like domain containing protein.)
genome : 39,321,544 - 39,322,052 (509)
query : 1 - 356 (356/356)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0226103
HIT000708870 (
ENST00000597089
)
(Crotonase superfamily protein.)
genome : 39,321,544 - 39,322,028 (485)
query : 1 - 343 (343/343)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5.5, cyto_nucl 4.5, cyto 2.5, mito 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0226103
HIT000708985 (
ENST00000597205
)
(ClpP/crotonase-like domain containing protein.)
genome : 39,321,718 - 39,322,415 (698)
query : 1 - 169 (169/169)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 6.16667, cyto 6, mito 5,
cyto_pero 4.66667, mito_nucl 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0226103
HIT000709581 (
ENST00000597805
)
(Non-protein coding transcript.)
genome : 39,321,718 - 39,322,406 (689)
query : 1 - 135 (135/135)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0226103
HIT000712835 (
ENST00000601094
)
(Crotonase superfamily protein.)
genome : 39,321,718 - 39,322,299 (582)
query : 1 - 440 (440/440)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 4, cyto_nucl 3.16667, cyto_pero 2.83333,
nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0226103
HIT000707359 (
ENST00000595567
)
(ClpP/crotonase-like domain containing protein.)
genome : 39,321,775 - 39,322,314 (540)
query : 1 - 308 (308/308)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9.5, cyto_nucl 9, extr 8, cyto 7.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0226103
HIT000713848 (
ENST00000602115
)
(Conserved hypothetical protein.)
genome : 39,322,090 - 39,322,388 (299)
query : 1 - 209 (209/209)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226103)
HIX0225870
HIT000022829
(
AK097975
)
Representative transcript
(Heterogeneous nuclear ribonucleoprotein L; hnRNP L;)
genome : 39,327,029 - 39,330,304 (3,276)
query : 1 - 2,119 (2,119/2,119)
4 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000707236 (
ENST00000595443
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 39,327,029 - 39,330,304 (3,276)
query : 1 - 2,122 (2,122/2,122)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000713188_02 (
ENST00000601449
)
(HnRNP-L/PTB/hephaestus splicing factor family protein.)
genome : 39,327,035 - 39,341,795 (14,761)
query : 1 - 1,918 (1,918/1,918)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000707595 (
ENST00000595804
)
(Conserved hypothetical protein.)
genome : 39,327,035 - 39,328,225 (1,191)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 11.5, nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000712615_02 (
ENST00000600873
)
(HnRNP-L/PTB/hephaestus splicing factor family protein.)
genome : 39,327,275 - 39,342,978 (15,704)
query : 1 - 1,633 (1,633/1,633)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000681936_02 (
ENST00000568980
)
(HnRNP-L/PTB/hephaestus splicing factor family protein.)
genome : 39,327,367 - 39,340,408 (13,042)
query : 1 - 1,568 (1,568/1,570)
13 exons
identity = 0.962
3'(0.981;0.948;0.948;0.985;0.967;0.965;1.000;
1.000;0.975;0.897;0.975;0.958;0.859)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12, mito 5.5, extr 4,
E.R._mito 3.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000332706
(
AY927544
)
(Heterogeneous nuclear ribonucleoprotein L; hnRNP L;)
genome : 39,329,292 - 39,330,818 (1,527)
query : 1 - 447 (447/447)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000713401 (
ENST00000601664
)
(RNA recognition motif domain containing protein.)
genome : 39,329,292 - 39,330,818 (1,527)
query : 1 - 447 (447/447)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000712789 (
ENST00000601047
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 39,334,011 - 39,342,978 (8,968)
query : 1 - 1,127 (1,127/1,127)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13, cyto 9.5, extr 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000711978_02 (
ENST00000600233
)
(HnRNP-L/PTB/hephaestus splicing factor family protein.)
genome : 39,334,497 - 39,340,008 (5,512)
query : 1 - 659 (659/659)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, mito_nucl 12, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0225870
HIT000713550_02 (
ENST00000601813
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 39,334,665 - 39,340,580 (5,916)
query : 1 - 593 (593/593)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 8.5, cyto_mito 8.5,
cyto_pero 8.5, cyto_golg 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0226681
HIT000712216 (
ENST00000600473
)
(Conserved hypothetical protein.)
genome : 39,335,369 - 39,336,139 (771)
query : 1 - 493 (493/493)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226681)
HIX0225870
HIT000712483 (
ENST00000600741
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 39,336,307 - 39,338,272 (1,966)
query : 1 - 624 (624/624)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225870)
HIX0202866
HIT000319333 (
NM_198445
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,358,470 - 39,368,919 (10,450)
query : 1 - 3,046 (3,046/3,046)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, extr 6, lyso 6, mito_nucl 6, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000656132 (
NM_001195833
)
(Ras and Rab interactor-like protein isoform 1.)
genome : 39,358,470 - 39,368,919 (10,450)
query : 1 - 3,062 (3,062/3,062)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000133370 (
ENST00000340740
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,358,470 - 39,367,437 (8,968)
query : 6 - 3,021 (3,016/3,021)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.944)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, extr 6, lyso 6, mito_nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000047681
(
AK127808
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,358,474 - 39,367,437 (8,964)
query : 6 - 2,413 (2,408/2,413)
12 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.944)5'
coverage = 0.998
InterPro :
IPR003123 : VPS9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, extr 6, lyso 6, mito_nucl 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000044379
(
AK124506
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,358,474 - 39,360,619 (2,146)
query : 1 - 1,748 (1,748/1,748)
3 exons
identity = 0.998
3'(0.998;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR003123 : VPS9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000492951
(
AK298327
)
Representative transcript
(Ras and Rab interactor-like protein isoform 1.)
genome : 39,359,622 - 39,368,919 (9,298)
query : 1 - 1,910 (1,910/1,910)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR003123 : VPS9 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC044761
Equus
sp. (Horse) : ENSECAT00000022099
Oryzias
sp. (Medaka) : ENSORLT00000010728
Pongo
sp. (Orangutan) : ENSPPYT00000011570
Tetraodon
sp. (Tetraodon) : GSTENT00037520001
Rattus
sp. (Rat) : XM_001078499
Macaca
sp. (Macaque) : XM_001083885
Pan
sp. (Chimpanzee) : XM_001167964
Monodelphis
sp. (Opossum) : XM_001367956
Canis
sp. (Dog) : XM_541634
Bos
sp. (Cow) : XM_580597
HIX0202866
HIT000703634 (
ENST00000591812
)
(Ras and Rab interactor-like protein isoform 1.)
genome : 39,359,622 - 39,368,919 (9,298)
query : 1 - 1,910 (1,910/1,910)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000045992
(
AK126119
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,359,622 - 39,368,897 (9,276)
query : 1 - 2,290 (2,290/2,290)
9 exons
identity = 1.000
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003123 : VPS9 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000700951 (
ENST00000589111
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,359,622 - 39,368,897 (9,276)
query : 1 - 2,290 (2,290/2,290)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000710667 (
ENST00000598904
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,359,622 - 39,367,421 (7,800)
query : 1 - 1,846 (1,846/1,846)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 7, extr 6, lyso 6, mito_nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000705238 (
ENST00000593424
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,359,631 - 39,360,683 (1,053)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000708744 (
ENST00000596961
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,359,871 - 39,360,565 (695)
query : 1 - 533 (533/533)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8, nucl 7, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000705620 (
ENST00000593809
)
(Ras and Rab interactor-like protein isoform 2.)
genome : 39,359,924 - 39,360,561 (638)
query : 1 - 346 (346/346)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0226460
HIT000705641 (
ENST00000593830
)
(Conserved hypothetical protein.)
genome : 39,360,799 - 39,364,403 (3,605)
query : 1 - 504 (504/504)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226460)
HIX0202866
HIT000713971 (
ENST00000602238
)
(Non-protein coding transcript.)
genome : 39,361,210 - 39,361,491 (282)
query : 1 - 186 (186/186)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000708702 (
ENST00000596919
)
(Ras and Rab interactor-like protein;)
genome : 39,362,106 - 39,368,906 (6,801)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.66667, cyto 6, nucl 5,
cyto_pero 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000711661 (
ENST00000599911
)
(Ras and Rab interactor-like protein isoform 1.)
genome : 39,364,391 - 39,368,904 (4,514)
query : 1 - 504 (504/504)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000709820 (
ENST00000598048
)
(Ras and Rab interactor-like protein isoform 1.)
genome : 39,364,526 - 39,368,913 (4,388)
query : 1 - 596 (596/596)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, extr 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0202866
HIT000339107
(
BC108703
)
(Conserved hypothetical protein.)
genome : 39,366,718 - 39,367,097 (380)
query : 1 - 380 (380/399)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 9, nucl 4.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202866)
HIX0015103
HIT000384954
(
AK225824
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,201 - 39,390,285 (21,085)
query : 1 - 1,840 (1,840/1,882)
15 exons
identity = 0.999
3'(0.999;0.985;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000031359
(
BC003012
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,201 - 39,390,353 (21,153)
query : 1 - 1,909 (1,909/1,931)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000031585
(
BC003547
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,201 - 39,390,353 (21,153)
query : 1 - 1,909 (1,909/1,931)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000209868 (
NM_030593
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,195 - 39,390,502 (21,308)
query : 1 - 2,064 (2,064/2,078)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000655780 (
NM_001193286
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,369,195 - 39,390,502 (21,308)
query : 1 - 1,912 (1,912/1,926)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, nucl 9, cyto 9, extr 8, pero 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000204019 (
NM_012237
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,195 - 39,390,463 (21,269)
query : 1 - 2,072 (2,072/2,086)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000659282 (
NR_034146
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,195 - 39,384,795 (15,601)
query : 1 - 1,995 (1,995/2,009)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000068435
(
AF095714
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,201 - 39,390,271 (21,071)
query : 11 - 1,839 (1,829/1,856)
15 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.995
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000002058
(
AF160214
)
(Conserved hypothetical protein.)
genome : 39,369,201 - 39,390,263 (21,063)
query : 1 - 1,816 (1,816/1,833)
15 exons
identity = 0.993
3'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
0.985;1.000;0.983;1.000;1.000;1.000;1.000;
0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000070805
(
AF131800
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,369,201 - 39,384,507 (15,307)
query : 13 - 1,559 (1,547/1,576)
12 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR026591 : Sirtuin family, catalytic core small domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, nucl 9, cyto 9, extr 8, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000009150
(
AK025876
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,201 - 39,390,284 (21,084)
query : 5 - 1,844 (1,840/1,859)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000248308
(
AJ505014
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,204 - 39,385,050 (15,847)
query : 1 - 2,533 (2,533/2,550)
13 exons
identity = 0.997
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.983;
1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10.5, nucl 9.5, extr 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000475575 (
ENST00000392081
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,197 - 39,390,502 (21,306)
query : 1 - 2,062 (2,062/2,062)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000105959 (
ENST00000249396
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,197 - 39,390,463 (21,267)
query : 1 - 2,070 (2,070/2,070)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000567478 (
ENST00000462654
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,197 - 39,385,050 (15,854)
query : 1 - 2,539 (2,539/2,539)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10.5, nucl 9.5, extr 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000583360 (
ENST00000479290
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,369,197 - 39,384,748 (15,552)
query : 1 - 4,734 (4,734/4,734)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 10, extr 8, cyto_nucl 8,
cyto 6.5, cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000066540
(
AF083107
)
Representative transcript
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,202 - 39,390,361 (21,160)
query : 1 - 1,963 (1,963/1,963)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF299337
Rattus
sp. (Rat) : BC086545
Bos
sp. (Cow) : BC149114
Gallus
sp. (Chicken) : CR353932
Pongo
sp. (Orangutan) : CR858698
Equus
sp. (Horse) : ENSECAT00000025162
Macaca
sp. (Macaque) : ENSMMUT00000033256
Monodelphis
sp. (Opossum) : ENSMODT00000039970
Oryzias
sp. (Medaka) : ENSORLT00000010758
Danio
sp. (Zebrafish) : NM_001044708
Takifugu
sp. (Fugu) : SINFRUT00000178770
Pan
sp. (Chimpanzee) : XM_001168319
Canis
sp. (Dog) : XM_850289
HIX0015103
HIT000011256
(
AK054642
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,202 - 39,390,300 (21,099)
query : 1 - 1,896 (1,896/1,896)
16 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, nucl 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000250658
(
AY030277
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,202 - 39,390,263 (21,062)
query : 1 - 1,817 (1,817/1,817)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000249678
(
AK131390
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,369,202 - 39,384,748 (15,547)
query : 1 - 4,730 (4,730/4,730)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 10, extr 8, cyto_nucl 8,
cyto 6.5, cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000408420
(
AB009274
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,209 - 39,390,227 (21,019)
query : 1 - 1,778 (1,778/1,778)
15 exons
identity = 0.989
3'(0.981;1.000;1.000;1.000;1.000;1.000;1.000;
0.977;1.000;1.000;0.991;1.000;1.000;1.000;
0.988)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000312562 (
ENST00000358931
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,221 - 39,390,353 (21,133)
query : 1 - 1,784 (1,784/1,784)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, extr 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000423513
(
AK290716
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,369,759 - 39,384,795 (15,037)
query : 1 - 1,431 (1,431/1,431)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000433358
(
AK314492
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,369,795 - 39,390,217 (20,423)
query : 1 - 1,226 (1,226/1,226)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR003000 : Sirtuin family
IPR026590 : Sirtuin family, catalytic core domain
IPR029035 : DHS-like NAD/FAD-binding domain
GO :
0070403 : Molecular Function : NAD+ binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000599410 (
ENST00000496069
)
(Non-protein coding transcript.)
genome : 39,370,063 - 39,370,793 (731)
query : 1 - 598 (598/606)
2 exons
identity = 0.995
3'(0.962;1.000)5'
coverage = 0.987
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000512875 (
ENST00000414941
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 2.)
genome : 39,371,461 - 39,390,463 (19,003)
query : 1 - 1,251 (1,251/1,251)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10.5, cyto 8.5, extr 8, pero 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000518374 (
ENST00000420440
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,371,740 - 39,390,318 (18,579)
query : 1 - 927 (927/927)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000541832 (
ENST00000443898
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,372,072 - 39,390,351 (18,280)
query : 1 - 985 (985/985)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 10.5, nucl 7, extr 6, mito 2,
pero 2, golg 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000506001 (
ENST00000407552
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,374,279 - 39,390,354 (16,076)
query : 1 - 890 (890/890)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000017807
(
AK092940
)
(NAD-dependent protein deacetylase sirtuin-2; EC=3.5.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2;)
genome : 39,377,113 - 39,379,870 (2,758)
query : 1 - 2,757 (2,757/2,757)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 3.5.1.-
InterPro :
IPR029035 : DHS-like NAD/FAD-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 6.5, cyto_mito 6.33333,
cyto_nucl 5.16667, cyto 4.5, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000363044 (
ENST00000381766
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,379,727 - 39,384,917 (5,191)
query : 1 - 848 (848/848)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000595466 (
ENST00000491960
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,379,809 - 39,390,240 (10,432)
query : 1 - 619 (619/619)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000580949 (
ENST00000476771
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,379,871 - 39,384,507 (4,637)
query : 14 - 584 (571/584)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.978
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.6667, cyto 10,
cyto_pero 7.33333, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000549127 (
ENST00000451193
)
(NAD-dependent protein deacetylase Sirt2; EC=3.5.1.-; Regulatory protein SIR2 homolog; SIR2-related protein;)
genome : 39,380,337 - 39,390,242 (9,906)
query : 1 - 556 (556/556)
7 exons
identity = 0.993
3'(1.000;1.000;1.000;0.961;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 16.5, cyto 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000521460 (
ENST00000423526
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,380,500 - 39,390,221 (9,722)
query : 1 - 556 (556/556)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, extr 7, cyto 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000535762 (
ENST00000437828
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,380,523 - 39,390,285 (9,763)
query : 1 - 555 (555/555)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.1667, cyto 9.5, nucl 7.5,
cyto_pero 7.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000545673 (
ENST00000447739
)
(NAD-dependent protein deacetylase sirtuin-2 isoform 3.)
genome : 39,380,539 - 39,390,351 (9,813)
query : 1 - 578 (578/578)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.6667, cyto 10, cyto_pero 7.5,
nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000019665
(
AK094810
)
(Conserved hypothetical protein.)
genome : 39,388,181 - 39,390,300 (2,120)
query : 1 - 2,120 (2,120/2,120)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015103
HIT000585354 (
ENST00000481381
)
(Conserved hypothetical protein.)
genome : 39,389,020 - 39,390,228 (1,209)
query : 1 - 618 (618/618)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 8, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015103)
HIX0015105
HIT000722832 (
NM_001243116
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,340 - 39,399,534 (9,195)
query : 1 - 994 (994/1,001)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000688562 (
ENST00000576510
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,340 - 39,398,289 (7,950)
query : 1 - 820 (820/820)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000409802
(
AB362577
)
(Non-protein coding transcript.)
genome : 39,390,342 - 39,395,749 (5,408)
query : 1 - 133 (133/133)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000726198 (
NR_040515
)
(NF-kappa-B inhibitor beta isoform 2.)
genome : 39,390,570 - 39,399,534 (8,965)
query : 1 - 2,251 (2,251/2,265)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, cyto 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000199396 (
NM_002503
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,570 - 39,399,534 (8,965)
query : 1 - 1,236 (1,236/1,243)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000685118 (
ENST00000572515
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,592 - 39,399,178 (8,587)
query : 1 - 1,929 (1,929/1,929)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000329719
(
AB209784
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,604 - 39,399,178 (8,575)
query : 1 - 1,917 (1,917/1,917)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, mito_pero 8.5, extr 6, nucl 5, cyto 5,
cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000475573 (
ENST00000392079
)
(NF-kappa-B inhibitor beta isoform 2.)
genome : 39,390,615 - 39,399,531 (8,917)
query : 1 - 2,203 (2,203/2,203)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000687576 (
ENST00000575359
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,618 - 39,397,917 (7,300)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000014469
(
AK057862
)
(NF-kappa-B inhibitor beta isoform 2.)
genome : 39,390,620 - 39,399,533 (8,914)
query : 2 - 2,201 (2,200/2,201)
5 exons
identity = 0.997
5'(1.000;1.000;0.997;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000423366
(
AK290569
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,620 - 39,398,471 (7,852)
query : 2 - 1,195 (1,194/1,195)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000609555 (
ENST00000509705
)
(NF-kappa-B inhibitor beta isoform 2.)
genome : 39,390,620 - 39,399,533 (8,914)
query : 1 - 2,200 (2,200/2,200)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000037167
(
BC015528
)
Representative transcript
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,639 - 39,399,526 (8,888)
query : 1 - 1,159 (1,159/1,184)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK038631
Rattus
sp. (Rat) : BC085729
Bos
sp. (Cow) : BC122726
Canis
sp. (Dog) : ENSCAFT00000009066
Equus
sp. (Horse) : ENSECAT00000015087
Monodelphis
sp. (Opossum) : ENSMODT00000017108
Oryzias
sp. (Medaka) : ENSORLT00000019866
Pongo
sp. (Orangutan) : ENSPPYT00000011573
Tetraodon
sp. (Tetraodon) : GSTENT00018443001
Macaca
sp. (Macaque) : XM_001085582
Pan
sp. (Chimpanzee) : XM_001168499
HIX0015105
HIT000119805 (
ENST00000313582
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,639 - 39,399,526 (8,888)
query : 1 - 1,159 (1,159/1,159)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000099663
(
BT006743
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,390,673 - 39,399,470 (8,798)
query : 1 - 1,069 (1,069/1,071)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0015105
HIT000086752
(
BC007197
)
(NF-kappa-B inhibitor beta; NF-kappa-BIB; I-kappa-B-beta; IkB-B; IkB-beta; IkappaBbeta; Thyroid receptor-interacting protein 9; TR-interacting protein 9; TRIP-9;)
genome : 39,395,854 - 39,399,179 (3,326)
query : 1 - 1,552 (1,552/1,572)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015105)
HIX0225992
HIT000722868 (
NM_001243212
)
(Conserved hypothetical protein.)
genome : 39,399,620 - 39,402,798 (3,179)
query : 1 - 1,057 (1,057/1,074)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225992)
HIX0225992
HIT000684530 (
ENST00000571838
)
(Conserved hypothetical protein.)
genome : 39,399,620 - 39,402,798 (3,179)
query : 1 - 1,057 (1,057/1,057)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225992)
HIX0225992
HIT000684535 (
ENST00000571845
)
(Conserved hypothetical protein.)
genome : 39,399,620 - 39,401,514 (1,895)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225992)
HIX0226469
HIT000706066 (
ENST00000594259
)
(Serine-tRNA ligase, type1 family protein.)
genome : 39,405,906 - 39,406,686 (781)
query : 1 - 690 (690/690)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 5.5, mito 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226469)
HIX0226584
HIT000709268 (
ENST00000597490
)
(Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain containing protein.)
genome : 39,406,848 - 39,408,564 (1,717)
query : 1 - 308 (308/308)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 11, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226584)
HIX0226730
HIT000713767 (
ENST00000602034
)
(Conserved hypothetical protein.)
genome : 39,408,677 - 39,410,639 (1,963)
query : 1 - 498 (498/498)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226730)
HIX0225976
HIT000710112 (
ENST00000598343
)
(Serine-tRNA ligase, type1 family protein.)
genome : 39,412,032 - 39,421,399 (9,368)
query : 1 - 541 (541/541)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 13, cyto_nucl 5, nucl 4.5,
cyto 4, cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225976)
HIX0225976
HIT000490794
(
AK296170
)
Representative transcript
(Serine-tRNA ligase, type1 family protein.)
genome : 39,412,276 - 39,421,403 (9,128)
query : 1 - 1,022 (1,022/1,022)
3 exons
identity = 0.999
3'(1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR002317 : Serine-tRNA ligase, type1
IPR010978 : tRNA-binding arm
IPR015866 : Serine-tRNA synthetase, type1, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0004828 : Molecular Function : serine-tRNA ligase activity
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006434 : Biological Process : seryl-tRNA aminoacylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.8333, cyto_nucl 6, nucl 5,
cyto 4.5, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225976)
HIX0225976
HIT000710363 (
ENST00000598598
)
(Serine-tRNA ligase, type1 family protein.)
genome : 39,412,276 - 39,421,403 (9,128)
query : 1 - 1,022 (1,022/1,022)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.8333, cyto_nucl 6, nucl 5,
cyto 4.5, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225976)
HIX0225976
HIT000705565 (
ENST00000593754
)
(Serine-tRNA synthetase, type1, N-terminal domain containing protein.)
genome : 39,412,652 - 39,421,399 (8,748)
query : 1 - 565 (565/565)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, extr 11, cyto_mito 9.33333, cyto 5.5,
extr_plas 5.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225976)
HIX0015107
HIT000258917
(
BC006424
)
Representative transcript
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,188 - 39,423,654 (2,467)
query : 1 - 1,201 (1,201/1,237)
3 exons
identity = 0.999
5'(0.998;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005679 : Ribosomal protein S12, bacteria
IPR006032 : Ribosomal protein S12/S23
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0015935 : Cellular Component : small ribosomal subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146730
Rattus
sp. (Rat) : AY387095
Danio
sp. (Zebrafish) : BC050176
Bos
sp. (Cow) : BC114019
Gallus
sp. (Chicken) : BX930044
Pongo
sp. (Orangutan) : CR858825
Monodelphis
sp. (Opossum) : ENSMODT00000017111
Oryzias
sp. (Medaka) : ENSORLT00000008845
Rattus
sp. (Rat) : ENSRNOT00000027029
Tetraodon
sp. (Tetraodon) : GSTENT00008593001
Takifugu
sp. (Fugu) : SINFRUT00000179378
Macaca
sp. (Macaque) : XM_001086153
Pan
sp. (Chimpanzee) : XM_001135151
Equus
sp. (Horse) : XM_001497611
Canis
sp. (Dog) : XM_541631
HIX0015107
HIT000117821 (
ENST00000308018
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,188 - 39,423,660 (2,473)
query : 1 - 1,207 (1,207/1,207)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000211312 (
NM_033362
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,348 - 39,423,658 (2,311)
query : 1 - 1,045 (1,045/1,116)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000710498 (
ENST00000598734
)
(Conserved hypothetical protein.)
genome : 39,421,584 - 39,422,501 (918)
query : 1 - 641 (641/641)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 9.5, cyto_pero 7.66667,
nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000506103 (
ENST00000407800
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,594 - 39,423,802 (2,209)
query : 1 - 1,220 (1,220/1,220)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000211313 (
NM_033363
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,594 - 39,423,658 (2,065)
query : 1 - 972 (972/991)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000208234 (
NM_021107
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,594 - 39,423,658 (2,065)
query : 1 - 1,076 (1,076/1,094)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000325670
(
Y11681
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,594 - 39,423,658 (2,065)
query : 1 - 1,076 (1,076/1,094)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005679 : Ribosomal protein S12, bacteria
IPR006032 : Ribosomal protein S12/S23
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0015935 : Cellular Component : small ribosomal subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000033253
(
BC007499
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,595 - 39,423,658 (2,064)
query : 1 - 798 (798/869)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005679 : Ribosomal protein S12, bacteria
IPR006032 : Ribosomal protein S12/S23
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0015935 : Cellular Component : small ribosomal subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000030519
(
BC001617
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,639 - 39,423,658 (2,020)
query : 1 - 927 (927/946)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005679 : Ribosomal protein S12, bacteria
IPR006032 : Ribosomal protein S12/S23
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0015935 : Cellular Component : small ribosomal subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000503950 (
ENST00000402029
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,639 - 39,423,660 (2,022)
query : 1 - 929 (929/929)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0015107
HIT000267106
(
CR407609
)
(28S ribosomal protein S12, mitochondrial; MRP-S12; S12mt; MT-RPS12; Precursor;)
genome : 39,421,935 - 39,423,337 (1,403)
query : 1 - 414 (414/414)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005679 : Ribosomal protein S12, bacteria
IPR006032 : Ribosomal protein S12/S23
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
0015935 : Cellular Component : small ribosomal subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 7.5, cyto_nucl 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015107)
HIX0212752
HIT000209585 (
NM_024907
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,042 - 39,466,380 (34,339)
query : 1 - 2,215 (2,215/2,215)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 5, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000213432 (
NM_148169
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,042 - 39,443,327 (11,286)
query : 1 - 2,175 (2,175/2,175)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9.5, mito 9, cyto_pero 8.33333,
nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000078754
(
AF386743
)
Representative transcript
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,044 - 39,466,380 (34,337)
query : 1 - 2,216 (2,216/2,217)
6 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133408
Rattus
sp. (Rat) : BC079218
Danio
sp. (Zebrafish) : BC092704
Bos
sp. (Cow) : BC149102
Pongo
sp. (Orangutan) : ENSPPYT00000011576
Takifugu
sp. (Fugu) : SINFRUT00000150838
Monodelphis
sp. (Opossum) : XM_001367802
Equus
sp. (Horse) : XM_001496823
Pan
sp. (Chimpanzee) : XM_512645
Canis
sp. (Dog) : XM_541630
HIX0212752
HIT000113631 (
ENST00000292852
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,044 - 39,466,550 (34,507)
query : 1 - 2,383 (2,383/2,383)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000385286
(
AK226156
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,900 - 39,437,469 (4,570)
query : 1 - 4,555 (4,555/4,556)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
InterPro :
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000035795
(
BC012385
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,917 - 39,466,291 (33,375)
query : 1 - 1,252 (1,252/1,269)
6 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000014541
(
AK057934
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,918 - 39,443,327 (10,410)
query : 1 - 1,299 (1,299/1,299)
6 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9.5, mito 9, cyto_pero 8.33333,
nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000707123 (
ENST00000595329
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,918 - 39,443,327 (10,410)
query : 1 - 1,299 (1,299/1,299)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9.5, mito 9, cyto_pero 8.33333,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000005134
(
AK021860
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,432,918 - 39,437,356 (4,439)
query : 1 - 2,152 (2,152/2,152)
3 exons
identity = 0.990
3'(0.996;0.986;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000711173 (
ENST00000599418
)
(Conserved hypothetical protein.)
genome : 39,432,918 - 39,437,356 (4,439)
query : 1 - 2,222 (2,222/2,222)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000709472 (
ENST00000597696
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,433,171 - 39,437,686 (4,516)
query : 1 - 932 (932/932)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000707815 (
ENST00000596025
)
(F-box only protein 17 isoform 1.)
genome : 39,433,322 - 39,466,342 (33,021)
query : 1 - 935 (935/935)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, nucl 5, E.R._mito 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000711351 (
ENST00000599598
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,435,368 - 39,439,243 (3,876)
query : 1 - 510 (510/510)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0212752
HIT000713133 (
ENST00000601394
)
(F-box only protein 17; F-box only protein 26;)
genome : 39,435,620 - 39,440,806 (5,187)
query : 1 - 2,366 (2,366/2,366)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212752)
HIX0015109
HIT000710163 (
ENST00000598394
)
(F-box only protein 27;)
genome : 39,481,354 - 39,517,600 (36,247)
query : 1 - 300 (300/300)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10.5, cyto 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000040946
(
BC030060
)
Representative transcript
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,514,664 - 39,523,165 (8,502)
query : 1 - 2,131 (2,131/2,158)
7 exons
identity = 0.995
3'(1.000;0.991;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.3333, extr 10, cyto 6.5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK053292
Tetraodon
sp. (Tetraodon) : CR662103
Bos
sp. (Cow) : ENSBTAT00000005144
Monodelphis
sp. (Opossum) : ENSMODT00000017117
Pongo
sp. (Orangutan) : ENSPPYT00000011578
Takifugu
sp. (Fugu) : SINFRUT00000179559
Macaca
sp. (Macaque) : XM_001084591
Equus
sp. (Horse) : XM_001496856
Canis
sp. (Dog) : XM_541629
Bos
sp. (Cow) : XM_603863
Rattus
sp. (Rat) : XR_006324
Pan
sp. (Chimpanzee) : XR_022744
HIX0015109
HIT000036759
(
BC014527
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,514,664 - 39,523,198 (8,535)
query : 1 - 2,321 (2,321/2,338)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.3333, extr 10, cyto 6.5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000318186 (
NM_178820
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,514,664 - 39,523,198 (8,535)
query : 1 - 2,321 (2,321/2,338)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.3333, extr 10, cyto 6.5,
cyto_pero 4.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000079646
(
AF436061
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,514,665 - 39,523,179 (8,515)
query : 1 - 2,301 (2,301/2,301)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 11, cyto_nucl 10.6667, cyto 6.5,
cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000609018 (
ENST00000509137
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,514,665 - 39,523,165 (8,501)
query : 1 - 2,130 (2,130/2,130)
7 exons
identity = 0.998
3'(1.000;0.996;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.3333, extr 10, cyto 6.5,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000113632 (
ENST00000292853
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,514,693 - 39,523,236 (8,544)
query : 1 - 2,330 (2,330/2,330)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.3333, extr 10, cyto 6.5,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000712570 (
ENST00000600828
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,515,479 - 39,523,425 (7,947)
query : 1 - 1,547 (1,547/1,557)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.3333, extr 10, cyto 6.5,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000706570 (
ENST00000594770
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,516,052 - 39,522,703 (6,652)
query : 1 - 771 (771/771)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, cyto 2, E.R._mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0015109
HIT000706963 (
ENST00000595166
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,516,159 - 39,522,042 (5,884)
query : 1 - 462 (462/462)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, cyto_nucl 7, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0226579
HIT000709082 (
ENST00000597303
)
(Conserved hypothetical protein.)
genome : 39,521,076 - 39,521,963 (888)
query : 1 - 797 (797/797)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226579)
HIX0015109
HIT000705658 (
ENST00000593847
)
(F-box only protein 27; F-box/G-domain protein 5;)
genome : 39,521,925 - 39,523,407 (1,483)
query : 1 - 508 (508/508)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015109)
HIX0040034
HIT000435316
(
BC142613
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,574,553 - 39,602,127 (27,575)
query : 1 - 2,881 (2,881/2,998)
11 exons
identity = 0.999
5'(1.000;0.997;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR008963 : Purple acid phosphatase-like, N-terminal
IPR015914 : Purple acid phosphatase, N-terminal
GO :
0003993 : Molecular Function : acid phosphatase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000713312 (
ENST00000601575
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,574,553 - 39,602,133 (27,581)
query : 1 - 2,887 (2,887/2,887)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000127131 (
ENST00000331256
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,574,945 - 39,602,133 (27,189)
query : 1 - 2,966 (2,966/2,966)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 6, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000315851 (
NM_001004318
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,574,945 - 39,602,129 (27,185)
query : 1 - 2,962 (2,962/2,962)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 6, nucl 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000249533
(
AK131245
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,574,945 - 39,601,478 (26,534)
query : 1 - 2,311 (2,311/2,311)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;0.993;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR008963 : Purple acid phosphatase-like, N-terminal
IPR015914 : Purple acid phosphatase, N-terminal
IPR025733 : Iron/zinc purple acid phosphatase-like C-terminal domain
IPR029052 : Metallo-dependent phosphatase-like
GO :
0003993 : Molecular Function : acid phosphatase activity
0016787 : Molecular Function : hydrolase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 6, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000500716
(
BC136721
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,575,834 - 39,601,399 (25,566)
query : 1 - 2,034 (2,034/2,034)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR008963 : Purple acid phosphatase-like, N-terminal
IPR015914 : Purple acid phosphatase, N-terminal
IPR025733 : Iron/zinc purple acid phosphatase-like C-terminal domain
IPR029052 : Metallo-dependent phosphatase-like
GO :
0003993 : Molecular Function : acid phosphatase activity
0016787 : Molecular Function : hydrolase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 6, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000500717
(
BC136722
)
Representative transcript
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,575,834 - 39,601,399 (25,566)
query : 1 - 2,034 (2,034/2,034)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR008963 : Purple acid phosphatase-like, N-terminal
IPR015914 : Purple acid phosphatase, N-terminal
IPR025733 : Iron/zinc purple acid phosphatase-like C-terminal domain
IPR029052 : Metallo-dependent phosphatase-like
GO :
0003993 : Molecular Function : acid phosphatase activity
0016787 : Molecular Function : hydrolase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 6, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK049131
Bos
sp. (Cow) : ENSBTAT00000016714
Danio
sp. (Zebrafish) : ENSDART00000093240
Monodelphis
sp. (Opossum) : ENSMODT00000017123
Oryzias
sp. (Medaka) : ENSORLT00000021099
Pongo
sp. (Orangutan) : ENSPPYT00000011579
Takifugu
sp. (Fugu) : SINFRUT00000174685
Macaca
sp. (Macaque) : XM_001086492
Equus
sp. (Horse) : XM_001916369
Pan
sp. (Chimpanzee) : XM_512647
Canis
sp. (Dog) : XM_541628
HIX0040034
HIT000389460
(
BC127841
)
(Iron/zinc purple acid phosphatase-like protein; EC=3.1.3.2; Precursor;)
genome : 39,575,876 - 39,600,818 (24,943)
query : 1 - 1,411 (1,411/1,411)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR008963 : Purple acid phosphatase-like, N-terminal
IPR015914 : Purple acid phosphatase, N-terminal
IPR025733 : Iron/zinc purple acid phosphatase-like C-terminal domain
IPR029052 : Metallo-dependent phosphatase-like
GO :
0003993 : Molecular Function : acid phosphatase activity
0016787 : Molecular Function : hydrolase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, lyso 6, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000435691
(
BC150149
)
(Iron/zinc purple acid phosphatase-like protein precursor.)
genome : 39,575,876 - 39,600,818 (24,943)
query : 1 - 1,149 (1,149/1,149)
10 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR008963 : Purple acid phosphatase-like, N-terminal
IPR015914 : Purple acid phosphatase, N-terminal
GO :
0003993 : Molecular Function : acid phosphatase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000706036 (
ENST00000594229
)
(Iron/zinc purple acid phosphatase-like protein precursor.)
genome : 39,575,876 - 39,600,818 (24,943)
query : 1 - 1,149 (1,149/1,149)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0040034
HIT000713268 (
ENST00000601531
)
(Iron/zinc purple acid phosphatase-like protein precursor.)
genome : 39,589,703 - 39,600,812 (11,110)
query : 1 - 736 (736/736)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.2
KEGG pathway :
00627 : Aminobenzoate degradation (45)
00740 : Riboflavin metabolism (21)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040034)
HIX0015110
HIT000713738 (
ENST00000602004
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,410 - 39,664,443 (48,034)
query : 1 - 564 (564/564)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000489210
(
AK294586
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,418 - 39,669,457 (53,040)
query : 2 - 1,720 (1,719/1,720)
8 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000202534 (
NM_005884
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,420 - 39,670,046 (53,627)
query : 1 - 2,838 (2,838/2,838)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000365404 (
NM_001014831
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,420 - 39,670,046 (53,627)
query : 1 - 3,064 (3,064/3,064)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000365405 (
NM_001014832
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,420 - 39,670,046 (53,627)
query : 1 - 2,765 (2,765/2,765)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000365407 (
NM_001014834
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,420 - 39,670,046 (53,627)
query : 1 - 2,306 (2,306/2,306)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000365408 (
NM_001014835
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,420 - 39,670,046 (53,627)
query : 1 - 2,379 (2,379/2,379)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000711225 (
ENST00000599470
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,422 - 39,669,457 (53,036)
query : 1 - 1,715 (1,715/1,715)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000488141
(
AK293517
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 39,616,428 - 39,669,348 (52,921)
query : 2 - 1,815 (1,814/1,815)
10 exons
identity = 0.999
5'(0.985;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, plas 7, cyto 7, mito 2,
E.R. 2, pero 2, E.R._mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000424636
(
AK291839
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,430 - 39,669,644 (53,215)
query : 1 - 2,428 (2,428/2,428)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 10.8333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000495256
(
AK300632
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 39,616,434 - 39,669,641 (53,208)
query : 1 - 1,762 (1,762/1,763)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.5, mito 7, plas 5, cyto 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000031290
(
BC002921
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,437 - 39,670,040 (53,604)
query : 1 - 2,322 (2,322/2,340)
10 exons
identity = 0.997
5'(0.984;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.3333, cyto 9, nucl 8.5, cyto_mito 7.5,
mito 4.5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000051176
(
BC034511
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,438 - 39,670,041 (53,604)
query : 1 - 2,556 (2,556/2,571)
10 exons
identity = 0.998
5'(0.975;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.8333, cyto 7.5,
cyto_mito 5.66667, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000122952 (
ENST00000321944
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,438 - 39,670,041 (53,604)
query : 1 - 2,555 (2,555/2,555)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.8333, cyto 7.5,
cyto_mito 5.66667, plas 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000705293 (
ENST00000593480
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,439 - 39,663,747 (47,309)
query : 1 - 714 (714/714)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000499275
(
AK304651
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 39,616,440 - 39,669,646 (53,207)
query : 1 - 1,827 (1,827/1,827)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 8.33333, cyto 7, pero 7, nucl 6.5,
cyto_mito 6.5, mito 4.5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000035223
(
BC011368
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,442 - 39,670,042 (53,601)
query : 1 - 2,741 (2,741/2,757)
9 exons
identity = 0.998
5'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000312025 (
ENST00000358301
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,442 - 39,670,042 (53,601)
query : 1 - 2,739 (2,739/2,739)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000061780
(
AF005046
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,453 - 39,670,042 (53,590)
query : 8 - 2,811 (2,804/2,838)
10 exons
identity = 0.998
5'(0.963;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 0.997
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000028966
(
AL834236
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,447 - 39,670,044 (53,598)
query : 2 - 2,278 (2,277/2,295)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000709542 (
ENST00000597766
)
(Non-protein coding transcript.)
genome : 39,616,453 - 39,643,032 (26,580)
query : 1 - 380 (380/380)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000039881
(
BC025282
)
Representative transcript
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,454 - 39,670,041 (53,588)
query : 1 - 3,025 (3,025/3,054)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK129298
Gallus
sp. (Chicken) : CR354162
Danio
sp. (Zebrafish) : ENSDART00000009545
Equus
sp. (Horse) : ENSECAT00000018379
Oryzias
sp. (Medaka) : ENSORLT00000001863
Pongo
sp. (Orangutan) : ENSPPYT00000011580
Pan
sp. (Chimpanzee) : ENSPTRT00000056088
Rattus
sp. (Rat) : ENSRNOT00000026966
Tetraodon
sp. (Tetraodon) : GSTENT00013042001
Takifugu
sp. (Fugu) : SINFRUT00000175965
Macaca
sp. (Macaque) : XM_001085295
Monodelphis
sp. (Opossum) : XM_001368288
Canis
sp. (Dog) : XM_541627
HIX0015110
HIT000705501 (
ENST00000593690
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,616,454 - 39,670,041 (53,588)
query : 1 - 3,025 (3,025/3,025)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000000858
(
AB032968
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,474 - 39,673,456 (56,983)
query : 1 - 5,742 (5,742/5,742)
9 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000711141 (
ENST00000599386
)
(Serine/threonine-protein kinase PAK 4 isoform 2.)
genome : 39,616,474 - 39,673,456 (56,983)
query : 1 - 5,735 (5,735/5,735)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto_nucl 9.83333, cyto 7.5,
cyto_mito 6.66667, mito 4.5, plas 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0226651
HIT000711239 (
ENST00000599484
)
(Hypothetical short protein.)
genome : 39,625,522 - 39,627,103 (1,582)
query : 1 - 365 (365/365)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 10.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226651)
HIX0040284
HIT000092820
(
BC032814
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 39,639,683 - 39,640,767 (1,085)
query : 12 - 1,096 (1,085/1,111)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 10, nucl 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040284)
HIX0015110
HIT000711409 (
ENST00000599657
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,647,342 - 39,664,291 (16,950)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000533607 (
ENST00000435673
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,658,867 - 39,670,046 (11,180)
query : 1 - 2,701 (2,701/2,701)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000313823 (
ENST00000360442
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,659,251 - 39,670,046 (10,796)
query : 1 - 2,855 (2,855/2,855)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000244544
(
AJ011855
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,660,194 - 39,669,219 (9,026)
query : 1 - 1,776 (1,776/1,776)
8 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;0.992;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10.3333, cyto 6.5,
cyto_mito 5.16667, plas 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000081763
(
AK074728
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,664,341 - 39,670,040 (5,700)
query : 1 - 1,809 (1,809/1,809)
6 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9, pero 7, mito_pero 6.33333,
nucl 4, mito 3.5, E.R._mito 3.16667, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000709491 (
ENST00000597715
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,665,576 - 39,669,404 (3,829)
query : 1 - 633 (633/633)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0015110
HIT000712094 (
ENST00000600350
)
(Serine/threonine-protein kinase PAK 4; EC=2.7.11.1; p21-activated kinase 4; PAK-4;)
genome : 39,667,129 - 39,669,250 (2,122)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, cyto 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015110)
HIX0202864
HIT000334468
(
BC092493
)
Representative transcript
(F-box only protein 50; NCC receptor protein 1 homolog; NCCRP-1; Non-specific cytotoxic cell receptor protein 1 homolog;)
genome : 39,687,601 - 39,692,523 (4,923)
query : 1 - 1,977 (1,977/1,990)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202864)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028022
Danio
sp. (Zebrafish) : BC092704
Tetraodon
sp. (Tetraodon) : CR697090
Monodelphis
sp. (Opossum) : ENSMODT00000017140
Oryzias
sp. (Medaka) : ENSORLT00000000565
Pongo
sp. (Orangutan) : ENSPPYT00000011581
Takifugu
sp. (Fugu) : SINFRUT00000150838
Macaca
sp. (Macaque) : XM_001086619
Equus
sp. (Horse) : XM_001916372
Rattus
sp. (Rat) : XM_218387
Pan
sp. (Chimpanzee) : XM_524260
Canis
sp. (Dog) : XM_850276
HIX0202864
HIT000132482 (
ENST00000339852
)
(F-box only protein 50; NCC receptor protein 1 homolog; NCCRP-1; Non-specific cytotoxic cell receptor protein 1 homolog;)
genome : 39,687,601 - 39,692,524 (4,924)
query : 1 - 1,978 (1,978/1,978)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202864)
HIX0202864
HIT000262841
(
BC067874
)
(F-box only protein 50; NCC receptor protein 1 homolog; NCCRP-1; Non-specific cytotoxic cell receptor protein 1 homolog;)
genome : 39,687,604 - 39,692,523 (4,920)
query : 1 - 1,976 (1,976/1,991)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202864)
HIX0202864
HIT000043814
(
AK123941
)
(F-box only protein 50; NCC receptor protein 1 homolog; NCCRP-1; Non-specific cytotoxic cell receptor protein 1 homolog;)
genome : 39,687,604 - 39,692,522 (4,919)
query : 1 - 1,973 (1,973/1,973)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007397 : F-box associated (FBA) domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202864)
HIX0202864
HIT000315378 (
NM_001001414
)
(F-box only protein 50; NCC receptor protein 1 homolog; NCCRP-1; Non-specific cytotoxic cell receptor protein 1 homolog;)
genome : 39,687,604 - 39,692,522 (4,919)
query : 1 - 1,973 (1,973/1,973)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 7.5, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202864)
HIX0027499
HIT000095802
(
BC039541
)
(Syncollin precursor.)
genome : 39,693,471 - 39,694,892 (1,422)
query : 1 - 559 (559/585)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
InterPro :
IPR028137 : Syncollin
GO :
0006887 : Biological Process : exocytosis
0030667 : Cellular Component : secretory granule membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027499)
HIX0027499
HIT000121696 (
ENST00000318438
)
(Syncollin precursor.)
genome : 39,693,471 - 39,694,906 (1,436)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027499)
HIX0027499
HIT000050222
(
AK130951
)
Representative transcript
(Syncollin precursor.)
genome : 39,693,474 - 39,694,902 (1,429)
query : 16 - 581 (566/581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.974
InterPro :
IPR028137 : Syncollin
GO :
0006887 : Biological Process : exocytosis
0030667 : Cellular Component : secretory granule membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027499)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF012887
Mus
sp. (Mouse) : AK003083
Danio
sp. (Zebrafish) : BC083442
Gallus
sp. (Chicken) : ENSGALT00000029210
Monodelphis
sp. (Opossum) : ENSMODT00000017142
Pongo
sp. (Orangutan) : ENSPPYT00000011582
Pan
sp. (Chimpanzee) : XM_001135373
Canis
sp. (Dog) : XM_850275
HIX0027499
HIT000388272
(
BC121075
)
(Syncollin precursor.)
genome : 39,693,562 - 39,694,906 (1,345)
query : 5 - 486 (482/486)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.992
InterPro :
IPR028137 : Syncollin
GO :
0006887 : Biological Process : exocytosis
0030667 : Cellular Component : secretory granule membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027499)
HIX0027499
HIT000388273
(
BC121076
)
(Syncollin precursor.)
genome : 39,693,562 - 39,694,906 (1,345)
query : 5 - 486 (482/486)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.992
InterPro :
IPR028137 : Syncollin
GO :
0006887 : Biological Process : exocytosis
0030667 : Cellular Component : secretory granule membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027499)
HIX0027499
HIT000398056 (
NM_001080468
)
(Syncollin precursor.)
genome : 39,693,562 - 39,694,906 (1,345)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027499)
HIX0226499
HIT000706880 (
ENST00000595082
)
(Interferon lambda family protein.)
genome : 39,727,073 - 39,727,933 (861)
query : 1 - 501 (501/501)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, mito 8, nucl 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226499)
HIX0040049
HIT000390104
(
BC130314
)
Representative transcript
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,246 - 39,735,646 (1,401)
query : 1 - 656 (656/656)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
Ortholog candidate ( ->
Evola
)
Monodelphis
sp. (Opossum) : ENSMODT00000033215
Pongo
sp. (Orangutan) : ENSPPYT00000011583
Pan
sp. (Chimpanzee) : XM_001135462
HIX0040049
HIT000390106
(
BC130316
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,246 - 39,735,646 (1,401)
query : 1 - 656 (656/656)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0040049
HIT000511785 (
ENST00000413851
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,246 - 39,735,646 (1,401)
query : 1 - 656 (656/656)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0040049
HIT000084613
(
AY129149
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,272 - 39,735,617 (1,346)
query : 2 - 603 (602/603)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.998
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0040049
HIT000214654 (
NM_172139
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,272 - 39,735,611 (1,340)
query : 1 - 595 (595/595)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0040049
HIT000251912
(
AY336714
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,272 - 39,735,610 (1,339)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0040049
HIT000251915
(
AY336717
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,272 - 39,735,610 (1,339)
query : 1 - 594 (594/594)
5 exons
identity = 0.992
3'(1.000;0.976;0.993;0.987;0.995)5'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0040049
HIT000085074
(
AY184374
)
(Interferon lambda-3; IFN-lambda-3; Cytokine Zcyto22; Interleukin-28B; IL-28B; Interleukin-28C; IL-28C; Precursor;)
genome : 39,734,272 - 39,735,607 (1,336)
query : 1 - 591 (591/591)
5 exons
identity = 0.997
3'(1.000;0.988;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040049)
HIX0226148
HIT000721258
(
JN806225
)
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,492 (1,492/1,492)
4 exons
identity = 0.996
3'(0.997;1.000;1.000;0.993)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721259
(
JN806226
)
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,420 (1,420/1,420)
3 exons
identity = 0.997
3'(0.999;1.000;0.993)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721260
(
JN806227
)
Representative transcript
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,637 (1,637/1,637)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721261
(
JN806228
)
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,493 (1,493/1,493)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721262
(
JN806229
)
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,421 (1,421/1,421)
3 exons
identity = 0.999
3'(0.999;1.000;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721264
(
JN806231
)
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,132 (1,132/1,132)
4 exons
identity = 0.996
3'(0.993;0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721265
(
JN806232
)
(Interferon lambda-4 precursor.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,131 (1,131/1,131)
4 exons
identity = 0.995
3'(0.993;0.995;1.000;0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721267
(
JN806234
)
(Interferon lambda-4; IFN-lambda-4; Precursor;)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,636 (1,636/1,636)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16.5, extr_plas 10, mito 9, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000725245 (
NM_001276254
)
(Interferon lambda family protein.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,636 (1,636/1,636)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16.5, extr_plas 10, mito 9, plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000727717 (
NR_074079
)
(Conserved hypothetical protein.)
genome : 39,736,954 - 39,739,496 (2,543)
query : 1 - 1,637 (1,637/1,637)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721263
(
JN806230
)
(Interferon lambda-4 precursor.)
genome : 39,738,104 - 39,739,496 (1,393)
query : 1 - 888 (888/916)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0226148
HIT000721266
(
JN806233
)
(Interferon lambda-4 precursor.)
genome : 39,738,104 - 39,739,496 (1,393)
query : 1 - 887 (887/915)
3 exons
identity = 0.998
3'(1.000;1.000;0.995)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226148)
HIX0202970
HIT000480161 (
ENST00000396851
)
(Peptide methionine sulphoxide reductase MrsB domain containing protein.)
genome : 39,745,556 - 39,745,909 (354)
query : 1 - 354 (354/354)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202970)
HIX0040048
pHIT000119912 ( pHIT000119912 )
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,755,022 - 39,760,653 (5,632)
query : 1 - 1,044 (1,044/1,044)
9 exons
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
CAGE tag :
T19R02A74CA6
HIX0040048
pHIT000033385 ( pHIT000033385 )
(Interferon lambda-4 precursor.)
genome : 39,755,022 - 39,756,457 (1,436)
query : 1 - 444 (444/444)
4 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
CAGE tag :
H10BA14E1601
HIX0040048
HIT000127534 (
ENST00000331982
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,154 - 39,760,732 (1,579)
query : 1 - 737 (737/737)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040048
HIT000387034
(
BC113581
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,154 - 39,760,673 (1,520)
query : 1 - 678 (678/678)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040048
HIT000387036
(
BC113583
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,154 - 39,760,673 (1,520)
query : 1 - 678 (678/678)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040048
HIT000084612
(
AY129148
)
Representative transcript
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,157 - 39,760,732 (1,576)
query : 1 - 734 (734/734)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY869695
Macaca
sp. (Macaque) : ENSMMUT00000015198
Pongo
sp. (Orangutan) : ENSPPYT00000011584
Rattus
sp. (Rat) : XM_001065467
Pan
sp. (Chimpanzee) : XM_001135422
Equus
sp. (Horse) : XM_001916380
Canis
sp. (Dog) : XM_850273
HIX0040048
HIT000214653 (
NM_172138
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,157 - 39,760,732 (1,576)
query : 1 - 734 (734/734)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040048
HIT000341915
(
DQ126337
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,157 - 39,760,732 (1,576)
query : 1 - 734 (734/734)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040048
HIT000251913
(
AY336715
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,316 - 39,760,653 (1,338)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040048
HIT000085073
(
AY184373
)
(Interferon lambda-2; IFN-lambda-2; Cytokine Zcyto20; Interleukin-28A; IL-28A; Precursor;)
genome : 39,759,319 - 39,760,653 (1,335)
query : 1 - 591 (591/591)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;0.976;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040048)
HIX0040050
HIT000128458 (
ENST00000333625
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,786,965 - 39,789,313 (2,349)
query : 1 - 857 (857/857)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000084614
(
AY129150
)
Representative transcript
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,786,965 - 39,789,312 (2,348)
query : 1 - 856 (856/856)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000043185
Canis
sp. (Dog) : ENSCAFT00000008994
Equus
sp. (Horse) : ENSECAT00000021129
Pongo
sp. (Orangutan) : ENSPPYT00000011585
Pan
sp. (Chimpanzee) : ENSPTRT00000020309
Macaca
sp. (Macaque) : XM_001085768
Macaca
sp. (Macaque) : XM_001086865
Gallus
sp. (Chicken) : XM_001234103
HIX0040050
HIT000214655 (
NM_172140
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,786,965 - 39,789,312 (2,348)
query : 1 - 856 (856/856)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000387770
(
BC117482
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,017 - 39,789,193 (2,177)
query : 1 - 685 (685/685)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000388775
(
BC126183
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,017 - 39,789,193 (2,177)
query : 1 - 685 (685/685)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000265492
(
BC074985
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,042 - 39,789,190 (2,149)
query : 1 - 657 (657/657)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000251914
(
AY336716
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,059 - 39,789,156 (2,098)
query : 1 - 606 (606/606)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000085072
(
AY184372
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,062 - 39,789,156 (2,095)
query : 1 - 603 (603/603)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000715317
(
JF268782
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,062 - 39,789,156 (2,095)
query : 1 - 603 (603/603)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0040050
HIT000653187
(
HQ214053
)
(Interferon lambda-1; IFN-lambda-1; Cytokine Zcyto21; Interleukin-29; IL-29; Precursor;)
genome : 39,787,062 - 39,788,634 (1,573)
query : 1 - 280 (280/280)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029177 : Interferon lambda
GO :
0005125 : Molecular Function : cytokine activity
0007259 : Biological Process : JAK-STAT cascade
0050778 : Biological Process : positive regulation of immune response
0051607 : Biological Process : defense response to virus
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040050)
HIX0015112
HIT000105888 (
ENST00000248668
)
(Leucine-rich repeat and fibronectin type III domain-containing protein 1; Synaptic adhesion-like molecule 2; Precursor;)
genome : 39,797,208 - 39,805,976 (8,769)
query : 1 - 3,381 (3,381/3,381)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 27, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015112)
HIX0015112
HIT000001199
(
AB040917
)
Representative transcript
(Leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor.)
genome : 39,797,208 - 39,805,765 (8,558)
query : 1 - 3,174 (3,174/3,174)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015112)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK090175
Danio
sp. (Zebrafish) : BC056798
Danio
sp. (Zebrafish) : BC154635
Oryzias
sp. (Medaka) : ENSORLT00000006370
Pongo
sp. (Orangutan) : ENSPPYT00000011586
Rattus
sp. (Rat) : ENSRNOT00000057073
Tetraodon
sp. (Tetraodon) : GSTENT00030046001
Takifugu
sp. (Fugu) : SINFRUT00000135984
Macaca
sp. (Macaque) : XM_001087094
Monodelphis
sp. (Opossum) : XM_001368472
Equus
sp. (Horse) : XM_001915890
Pan
sp. (Chimpanzee) : XM_512991
Canis
sp. (Dog) : XM_541626
HIX0015112
HIT000486238 (
NM_020862
)
(Leucine-rich repeat and fibronectin type III domain-containing protein 1; Synaptic adhesion-like molecule 2; Precursor;)
genome : 39,797,457 - 39,805,976 (8,520)
query : 1 - 3,132 (3,132/3,212)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 27, plas 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015112)
HIX0015112
HIT000096330
(
BC040681
)
(Leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor.)
genome : 39,797,457 - 39,805,341 (7,885)
query : 1 - 2,497 (2,497/2,577)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015112)
HIX0015112
HIT000091029
(
BC025310
)
(Leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor.)
genome : 39,798,174 - 39,805,289 (7,116)
query : 1 - 1,727 (1,727/1,832)
2 exons
identity = 0.997
3'(0.995;1.000)5'
coverage = 0.989
InterPro :
IPR000483 : Cysteine-rich flanking region, C-terminal
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015112)
HIX0040230
HIT000081525
(
AK074490
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,802,539 - 39,804,243 (1,705)
query : 1 - 1,706 (1,706/1,706)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040230)
HIX0015112
HIT000713647 (
ENST00000601911
)
(Leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor.)
genome : 39,805,291 - 39,811,498 (6,208)
query : 1 - 877 (877/877)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, pero 3, E.R._mito 3, cyto_mito 3,
mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015112)
HIX0015113
HIT000041737
(
BC032819
)
(Glia maturation factor gamma.)
genome : 39,819,003 - 39,826,171 (7,169)
query : 1 - 540 (540/601)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000201607 (
NM_004877
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,818,999 - 39,826,726 (7,728)
query : 1 - 657 (657/674)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000090538
(
BC022207
)
Representative transcript
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,818,999 - 39,826,646 (7,648)
query : 1 - 577 (577/594)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB007364
Mus
sp. (Mouse) : AK002834
Bos
sp. (Cow) : AY911328
Danio
sp. (Zebrafish) : BC049318
Canis
sp. (Dog) : ENSCAFT00000008981
Oryzias
sp. (Medaka) : ENSORLT00000006312
Pongo
sp. (Orangutan) : ENSPPYT00000011587
Takifugu
sp. (Fugu) : SINFRUT00000172346
Macaca
sp. (Macaque) : XM_001085983
Monodelphis
sp. (Opossum) : XM_001368538
Equus
sp. (Horse) : XM_001497889
Pan
sp. (Chimpanzee) : XM_512648
HIX0015113
HIT000265770
(
BC080180
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,818,999 - 39,826,646 (7,648)
query : 1 - 577 (577/594)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000260273
(
BC061922
)
(Glia maturation factor gamma.)
genome : 39,818,999 - 39,826,646 (7,648)
query : 1 - 1,028 (1,028/1,042)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000001723
(
AF038956
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,818,999 - 39,826,172 (7,174)
query : 7 - 547 (541/561)
6 exons
identity = 0.991
3'(0.974;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000713126 (
ENST00000601387
)
(Glia maturation factor gamma.)
genome : 39,818,993 - 39,826,657 (7,665)
query : 1 - 497 (497/497)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000709372 (
ENST00000597595
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,818,997 - 39,826,825 (7,829)
query : 1 - 758 (758/758)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000709806 (
ENST00000598034
)
(Glia maturation factor gamma.)
genome : 39,818,999 - 39,826,646 (7,648)
query : 1 - 1,028 (1,028/1,028)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000707004 (
ENST00000595207
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,818,999 - 39,826,645 (7,647)
query : 1 - 526 (526/526)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000708371 (
ENST00000596583
)
(Glia maturation factor gamma.)
genome : 39,818,999 - 39,826,171 (7,173)
query : 1 - 490 (490/490)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, nucl 2.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000057967
(
AB001993
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,000 - 39,826,172 (7,173)
query : 13 - 556 (544/556)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.978
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000712067 (
ENST00000600322
)
(Glia maturation factor gamma.)
genome : 39,819,002 - 39,833,012 (14,011)
query : 1 - 622 (622/622)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000706501 (
ENST00000594700
)
(Glia maturation factor gamma.)
genome : 39,819,005 - 39,826,679 (7,675)
query : 1 - 397 (397/397)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000713468 (
ENST00000601731
)
(Glia maturation factor gamma.)
genome : 39,819,005 - 39,826,677 (7,673)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 6, cyto 4, mito 2, cyto_pero 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000106423 (
ENST00000253054
)
(Glia maturation factor gamma.)
genome : 39,819,005 - 39,826,668 (7,664)
query : 1 - 616 (616/616)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000713918 (
ENST00000602185
)
(Glia maturation factor gamma.)
genome : 39,819,005 - 39,826,645 (7,641)
query : 1 - 423 (423/423)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000707427 (
ENST00000595636
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,024 - 39,826,664 (7,641)
query : 1 - 487 (487/487)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 9, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000334774
(
BC093799
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,093 - 39,826,679 (7,587)
query : 1 - 516 (516/516)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000337162
(
BC101818
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,093 - 39,826,679 (7,587)
query : 1 - 516 (516/516)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000501999
(
BC143548
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,093 - 39,826,677 (7,585)
query : 1 - 514 (514/514)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000501994
(
BC143543
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,097 - 39,826,679 (7,583)
query : 1 - 512 (512/512)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000501997
(
BC143546
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,097 - 39,826,678 (7,582)
query : 1 - 511 (511/511)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000267817
(
CR456967
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,119 - 39,826,172 (7,054)
query : 3 - 427 (425/429)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000268983
(
CR542114
)
(Glia maturation factor gamma; GMF-gamma;)
genome : 39,819,120 - 39,826,172 (7,053)
query : 3 - 426 (424/426)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR011171 : Glia maturation factor
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0015113
HIT000709988 (
ENST00000598218
)
(Glia maturation factor gamma.)
genome : 39,823,544 - 39,826,723 (3,180)
query : 1 - 430 (430/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015113)
HIX0226646
HIT000711033 (
ENST00000599274
)
(Hypothetical short protein.)
genome : 39,832,413 - 39,832,585 (173)
query : 1 - 173 (173/173)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226646)
HIX0226717
HIT000713350 (
ENST00000601613
)
(Conserved hypothetical protein.)
genome : 39,840,440 - 39,843,129 (2,690)
query : 1 - 2,690 (2,690/2,690)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226717)
HIX0202953
HIT000016105
(
AK091238
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,840,440 - 39,843,129 (2,690)
query : 1 - 2,690 (2,690/2,690)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, cyto 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202953)
HIX0225852
HIT000711464 (
ENST00000599712
)
(Conserved hypothetical protein.)
genome : 39,844,644 - 39,860,755 (16,112)
query : 1 - 925 (925/925)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000706011 (
ENST00000594204
)
(Conserved hypothetical protein.)
genome : 39,847,348 - 39,850,788 (3,441)
query : 1 - 626 (626/626)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, cyto 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000708108 (
ENST00000596319
)
(Conserved hypothetical protein.)
genome : 39,860,193 - 39,866,320 (6,128)
query : 1 - 604 (604/604)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000711768 (
ENST00000600018
)
(Sterile alpha motif, type 1 domain containing protein.)
genome : 39,860,732 - 39,867,186 (6,455)
query : 1 - 144 (144/144)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000261774
(
BC065211
)
Representative transcript
(Sterile alpha motif, type 1 domain containing protein.)
genome : 39,866,292 - 39,874,818 (8,527)
query : 1 - 2,067 (2,067/2,082)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR015327 : Smaug, pseudo-HEAT analogous topology
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000095852
(
BC039652
)
(Sterile alpha motif/pointed domain containing protein.)
genome : 39,867,149 - 39,875,486 (8,338)
query : 1 - 2,216 (2,216/2,237)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013761 : Sterile alpha motif/pointed domain
IPR015327 : Smaug, pseudo-HEAT analogous topology
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 9, mito 4, E.R. 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000707268 (
ENST00000595476
)
(Smaug, pseudo-HEAT analogous topology domain containing protein.)
genome : 39,869,145 - 39,871,936 (2,792)
query : 1 - 710 (710/710)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 17.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000710370 (
ENST00000598605
)
(Conserved hypothetical protein.)
genome : 39,871,374 - 39,874,226 (2,853)
query : 1 - 555 (555/555)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.1667, mito 9, cyto 6.5,
extr 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0225852
HIT000015908
(
AK091041
)
(Conserved hypothetical protein.)
genome : 39,871,661 - 39,875,552 (3,892)
query : 1 - 1,798 (1,798/1,798)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 13, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225852)
HIX0027614
HIT000048757
(
AK128884
)
Representative transcript
(Hypothetical protein.)
genome : 39,875,761 - 39,876,338 (578)
query : 1 - 577 (577/577)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto_nucl 4.5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027614)
HIX0027614
HIT000708060 (
ENST00000596271
)
(Hypothetical short protein.)
genome : 39,875,761 - 39,876,338 (578)
query : 1 - 578 (578/578)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, cyto_nucl 4.83333, mito 4,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027614)
HIX0015116
HIT000207606 (
NM_019088
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,271 - 39,881,835 (5,565)
query : 1 - 2,287 (2,287/2,320)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000723886 (
NM_001256826
)
(RNA polymerase II-associated factor 1 homolog isoform 2.)
genome : 39,876,271 - 39,881,835 (5,565)
query : 1 - 2,073 (2,073/2,106)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_mito 12.5, cyto_nucl 11.8333, mito 5.5,
mito_pero 4.83333, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000726674 (
NR_046384
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,271 - 39,881,835 (5,565)
query : 1 - 2,234 (2,234/2,267)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, extr 7, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000029283
(
BC000017
)
Representative transcript
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,271 - 39,881,679 (5,409)
query : 1 - 2,131 (2,131/2,164)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007133 : RNA polymerase II-associated, Paf1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK148538
Rattus
sp. (Rat) : BC097494
Pongo
sp. (Orangutan) : CR857657
Bos
sp. (Cow) : ENSBTAT00000027224
Danio
sp. (Zebrafish) : ENSDART00000064444
Oryzias
sp. (Medaka) : ENSORLT00000006285
Tetraodon
sp. (Tetraodon) : GSTENT00030053001
Takifugu
sp. (Fugu) : SINFRUT00000162918
Macaca
sp. (Macaque) : XM_001086329
Monodelphis
sp. (Opossum) : XM_001363015
Equus
sp. (Horse) : XM_001497960
Canis
sp. (Dog) : XM_848210
HIX0015116
HIT000247392
(
AJ401156
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,492 - 39,881,660 (5,169)
query : 1 - 1,891 (1,891/1,937)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007133 : RNA polymerase II-associated, Paf1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000036251
(
BC013402
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,492 - 39,881,746 (5,255)
query : 6 - 1,982 (1,977/2,025)
14 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.997
InterPro :
IPR007133 : RNA polymerase II-associated, Paf1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000067434
(
AF086555
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,492 - 39,876,946 (455)
query : 1 - 455 (455/464)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000004459
(
AK001985
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,492 - 39,881,732 (5,241)
query : 1 - 1,963 (1,963/1,966)
14 exons
identity = 0.997
3'(0.998;0.989;0.991;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;0.992;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000103513 (
ENST00000221265
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,492 - 39,881,835 (5,344)
query : 1 - 2,066 (2,066/2,066)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000707356 (
ENST00000595564
)
(RNA polymerase II-associated factor 1 homolog isoform 2.)
genome : 39,876,493 - 39,881,794 (5,302)
query : 1 - 1,810 (1,810/1,810)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_mito 12.5, cyto_nucl 11.8333, mito 5.5,
mito_pero 4.83333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000023253
(
AK098423
)
(RNA polymerase II-associated factor 1 homolog isoform 2.)
genome : 39,876,493 - 39,881,632 (5,140)
query : 1 - 1,648 (1,648/1,648)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007133 : RNA polymerase II-associated, Paf1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, mito 5, nucl 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000103514 (
ENST00000221266
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,876,555 - 39,881,746 (5,192)
query : 1 - 1,631 (1,631/1,631)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, nucl 5.5, mito 5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000707172 (
ENST00000595379
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,877,005 - 39,877,406 (402)
query : 1 - 281 (281/281)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000489249
(
AK294625
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,877,122 - 39,881,757 (4,636)
query : 1 - 1,383 (1,383/1,393)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR007133 : RNA polymerase II-associated, Paf1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, nucl 9, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000514662 (
ENST00000416728
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,877,122 - 39,881,757 (4,636)
query : 1 - 1,383 (1,383/1,383)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, nucl 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000710359 (
ENST00000598594
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,879,482 - 39,879,838 (357)
query : 1 - 280 (280/280)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000707588 (
ENST00000595797
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,879,934 - 39,881,722 (1,789)
query : 1 - 760 (760/760)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, extr 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000709144 (
ENST00000597365
)
(RNA polymerase II-associated factor 1 homolog; hPAF1; Pancreatic differentiation protein 2;)
genome : 39,880,526 - 39,881,757 (1,232)
query : 1 - 606 (606/606)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015116
HIT000709898 (
ENST00000598127
)
(Hypothetical short protein.)
genome : 39,880,709 - 39,881,794 (1,086)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015116)
HIX0015117
HIT000711172 (
ENST00000599417
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,881,943 - 39,890,616 (8,674)
query : 1 - 2,941 (2,941/2,941)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000120572 (
ENST00000315588
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,881,951 - 39,891,277 (9,327)
query : 1 - 3,653 (3,653/3,653)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, cyto_nucl 3.83333, cyto_pero 3.33333,
nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000495187
(
AK300563
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,881,951 - 39,888,816 (6,866)
query : 1 - 1,192 (1,192/1,192)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR021018 : Mediator complex, subunit Med29, metazoa
GO :
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, cyto_nucl 3.83333, cyto_pero 3.33333,
nucl 2.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000257397
(
AY729650
)
Representative transcript
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,881,963 - 39,891,202 (9,240)
query : 1 - 3,566 (3,566/3,604)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR021018 : Mediator complex, subunit Med29, metazoa
GO :
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, cyto_nucl 3.83333, cyto_pero 3.33333,
nucl 2.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171280
Mus
sp. (Mouse) : BC023192
Danio
sp. (Zebrafish) : BC094992
Bos
sp. (Cow) : BC126813
Tetraodon
sp. (Tetraodon) : CR712789
Oryzias
sp. (Medaka) : ENSORLT00000009251
Pongo
sp. (Orangutan) : ENSPPYT00000011590
Takifugu
sp. (Fugu) : SINFRUT00000150030
Monodelphis
sp. (Opossum) : XM_001368603
Equus
sp. (Horse) : XM_001497555
Rattus
sp. (Rat) : XM_214868
Canis
sp. (Dog) : XM_850265
Pan
sp. (Chimpanzee) : XR_019882
HIX0015117
HIT000317334 (
NM_017592
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,881,963 - 39,891,202 (9,240)
query : 1 - 3,566 (3,566/3,604)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, cyto_nucl 3.83333, cyto_pero 3.33333,
nucl 2.5, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000025592
(
AL137304
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,882,028 - 39,891,202 (9,175)
query : 1 - 3,501 (3,501/3,539)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR021018 : Mediator complex, subunit Med29, metazoa
GO :
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10.5, cyto_nucl 9.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000712715 (
ENST00000600973
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,882,028 - 39,884,277 (2,250)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 5, nucl 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000002886
(
AK000411
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,882,033 - 39,890,174 (8,142)
query : 1 - 2,468 (2,468/2,484)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10.5, cyto_nucl 9.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015117)
HIX0015117
HIT000492638
(
AK298014
)
(Mediator of RNA polymerase II transcription subunit 29; Intersex-like protein; Mediator complex subunit 29;)
genome : 39,882,033 - 39,889,247 (7,215)
query : 1 - 1,471 (1,471/1,471)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021018 : Mediator complex, subunit Med29, metazoa
GO :
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
&