bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0021294
HIT000039281
(
BC021739
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,023,162 - 159,092,681 (69,520)
query : 6 - 800 (795/834)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021294)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000056381
HIX0021294
HIT000660420 (
NR_038850
)
(Hypothetical short protein.)
genome : 159,023,162 - 159,092,681 (69,520)
query : 1 - 795 (795/812)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021294)
HIX0021294
HIT000510715 (
ENST00000412781
)
(Conserved hypothetical protein.)
genome : 159,023,162 - 159,092,681 (69,520)
query : 1 - 795 (795/795)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021294)
HIX0002525
HIT000112343 (
ENST00000283233
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,027,593 - 159,313,265 (285,673)
query : 1 - 3,122 (3,122/3,122)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000212562 (
NM_138803
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,027,869 - 159,313,265 (285,397)
query : 1 - 2,846 (2,846/2,846)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000043093
(
AK123220
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,027,869 - 159,313,111 (285,243)
query : 1 - 2,075 (2,075/2,075)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 12, extr 1, mito 1, pero 1, cysk 1,
mito_pero 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000552191 (
ENST00000454257
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,027,869 - 159,313,111 (285,243)
query : 1 - 2,075 (2,075/2,075)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 12, extr 1, mito 1, pero 1, cysk 1,
mito_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000507221 (
ENST00000409187
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,028,056 - 159,237,472 (209,417)
query : 1 - 2,523 (2,523/2,523)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000092513
(
BC031994
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,028,486 - 159,170,390 (141,905)
query : 1 - 1,136 (1,136/1,164)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.993;0.995;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 11, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000079981
(
AF458588
)
Representative transcript
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,028,478 - 159,313,214 (284,737)
query : 1 - 2,186 (2,186/2,205)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB055264
Mus
sp. (Mouse) : BC062650
Equus
sp. (Horse) : ENSECAT00000004912
Gallus
sp. (Chicken) : ENSGALT00000020503
Pan
sp. (Chimpanzee) : XM_001146077
Rattus
sp. (Rat) : XM_229941
Canis
sp. (Dog) : XM_535923
Bos
sp. (Cow) : XM_865557
HIX0002525
HIT000338300
(
BC105928
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,028,486 - 159,313,078 (284,593)
query : 1 - 1,942 (1,942/1,942)
13 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.981;0.986;0.995;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 13, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000338802
(
BC107596
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,028,486 - 159,313,078 (284,593)
query : 1 - 1,786 (1,786/1,786)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, mito 9, cyto 8, cyto_nucl 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000338803
(
BC107597
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,028,486 - 159,313,078 (284,593)
query : 1 - 2,041 (2,041/2,041)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000546590 (
ENST00000448656
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,028,486 - 159,313,078 (284,593)
query : 1 - 1,786 (1,786/1,786)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, mito 9, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000427649
(
AK308783
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,144,932 - 159,313,265 (168,334)
query : 1 - 1,585 (1,585/1,585)
8 exons
identity = 0.999
3'(0.998;0.995;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 9, cyto_nucl 8, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000429908
(
AK311042
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,145,100 - 159,313,265 (168,166)
query : 1 - 1,447 (1,447/1,447)
8 exons
identity = 0.999
3'(0.996;0.995;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, mito 3, pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000515000 (
ENST00000417066
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,145,100 - 159,313,265 (168,166)
query : 1 - 1,447 (1,447/1,447)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000635816 (
ENST00000536771
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,145,100 - 159,313,265 (168,166)
query : 1 - 1,447 (1,447/1,447)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000654800 (
NM_001171637
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,145,100 - 159,313,265 (168,166)
query : 1 - 1,447 (1,447/1,447)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, mito 3, pero 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000428112
(
AK309246
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,145,135 - 159,313,220 (168,086)
query : 1 - 1,471 (1,471/1,471)
9 exons
identity = 0.999
3'(0.995;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000549488 (
ENST00000451554
)
(Coiled-coil domain-containing protein 148 isoform 2.)
genome : 159,145,135 - 159,313,220 (168,086)
query : 1 - 1,471 (1,471/1,471)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000037108
(
BC015395
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,195,105 - 159,313,214 (118,110)
query : 1 - 1,160 (1,160/1,175)
7 exons
identity = 0.998
3'(0.997;1.000;0.993;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000507913 (
ENST00000409889
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,195,105 - 159,313,214 (118,110)
query : 1 - 1,160 (1,160/1,160)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000014711
(
AK058105
)
(Coiled-coil domain-containing protein 148 isoform 1.)
genome : 159,195,105 - 159,313,208 (118,104)
query : 1 - 1,073 (1,073/1,073)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0002525
HIT000595083 (
ENST00000491563
)
(Non-protein coding transcript.)
genome : 159,222,526 - 159,313,238 (90,713)
query : 1 - 458 (458/458)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002525)
HIX0163240
HIT000553182 (
ENST00000455248
)
(Conserved hypothetical protein.)
genome : 159,276,467 - 159,281,815 (5,349)
query : 1 - 751 (751/751)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 10,
cyto_nucl 7.33333, E.R._mito 6.33333, plas 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163240)
HIX0214799
HIT000555043 (
ENST00000457109
)
(Conserved hypothetical protein.)
genome : 159,313,626 - 159,477,534 (163,909)
query : 1 - 520 (520/520)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, extr 11, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214799)
HIX0214799
HIT000583465 (
ENST00000479398
)
(Non-protein coding transcript.)
genome : 159,313,645 - 159,314,843 (1,199)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214799)
HIX0214799
HIT000509834 (
ENST00000411900
)
(Plakophilin-4 family protein.)
genome : 159,313,648 - 159,445,462 (131,815)
query : 1 - 552 (552/552)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214799)
HIX0214799
HIT000567179 (
ENST00000462335
)
(Conserved hypothetical protein.)
genome : 159,314,705 - 159,477,908 (163,204)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214799)
HIX0204220
HIT000615315 (
ENST00000515912
)
(Non-protein coding transcript.)
genome : 159,390,712 - 159,390,796 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204220)
HIX0200409
HIT000476853 (
ENST00000393397
)
(Ribosomal protein L7Ae/L8/Nhp2 family protein.)
genome : 159,404,937 - 159,405,736 (800)
query : 1 - 800 (800/800)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, plas 4, E.R. 3.5, nucl 3, extr_plas 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200409)
HIX0214799
HIT000585098 (
ENST00000481115
)
(Conserved hypothetical protein.)
genome : 159,433,853 - 159,488,444 (54,592)
query : 1 - 884 (884/884)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, mito 7, extr 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214799)
HIX0214734
HIT000598327 (
ENST00000494945
)
(Armadillo-like helical domain containing protein.)
genome : 159,488,986 - 159,497,271 (8,286)
query : 1 - 522 (522/522)
3 exons
identity = 0.996
5'(1.000;0.996;0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, nucl 9.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214734)
HIX0214734
HIT000221623
(
U81005
)
Representative transcript
(Plakophilin-4 family protein.)
genome : 159,497,138 - 159,499,155 (2,018)
query : 23 - 314 (292/314)
2 exons
identity = 0.993
5'(1.000;0.987)3'
coverage = 0.930
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214734)
HIX0214734
HIT000595982 (
ENST00000492496
)
(Armadillo-like helical domain containing protein.)
genome : 159,499,032 - 159,518,276 (19,245)
query : 1 - 796 (796/796)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10.5, mito_pero 6.83333, cyto 6,
cyto_nucl 5.83333, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214734)
HIX0023965
HIT000046224
(
AK126351
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,514,849 - 159,591,514 (76,666)
query : 3 - 4,069 (4,067/4,069)
4 exons
identity = 0.998
3'(0.998;0.996;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 12, cyto 11.5, cyto_pero 7.5,
extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023965)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000014945
Pan
sp. (Chimpanzee) : ENSPTRT00000056379
HIX0023965
HIT000135522 (
ENST00000342892
)
(Conserved hypothetical protein.)
genome : 159,514,849 - 159,591,514 (76,666)
query : 1 - 4,067 (4,067/4,067)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 12, cyto 11.5, cyto_pero 7.5,
extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023965)
HIX0215037
HIT000587752 (
ENST00000483881
)
(Armadillo-like helical domain containing protein.)
genome : 159,519,570 - 159,523,171 (3,602)
query : 1 - 452 (452/452)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215037)
HIX0214551
HIT000011629
(
AK055015
)
Representative transcript
(Plakophilin/Delta catenin family protein.)
genome : 159,525,682 - 159,533,867 (8,186)
query : 1 - 1,566 (1,566/1,566)
4 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, cyto 5, cyto_nucl 5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214551)
HIX0214551
HIT000590016 (
ENST00000486254
)
(Armadillo-like helical domain containing protein.)
genome : 159,525,682 - 159,533,867 (8,186)
query : 1 - 1,566 (1,566/1,566)
4 exons
identity = 0.995
5'(0.996;0.941;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 10, cyto 5, cyto_nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214551)
HIX0023965
HIT000095739
(
BC039475
)
(Conserved hypothetical protein.)
genome : 159,535,168 - 159,591,330 (56,163)
query : 1 - 825 (825/912)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023965)
HIX0023965
HIT000540600 (
ENST00000442666
)
(Hypothetical short protein.)
genome : 159,535,168 - 159,591,330 (56,163)
query : 1 - 825 (825/825)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023965)
HIX0163090
HIT000547460 (
ENST00000449526
)
(Hypothetical short protein.)
genome : 159,542,415 - 159,610,287 (67,873)
query : 1 - 510 (510/510)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11, extr 10, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163090)
HIX0163185
HIT000551164 (
ENST00000453230
)
(Conserved hypothetical protein.)
genome : 159,559,799 - 159,559,972 (174)
query : 1 - 174 (174/174)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 10.5, cyto 10.5, extr 6, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163185)
HIX0024155
HIT000048275
(
AK128402
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,593,033 - 159,596,314 (3,282)
query : 1 - 3,291 (3,291/3,292)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, cyto_nucl 8.5, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024155)
HIX0029805
HIT000507078 (
ENST00000409042
)
(Death-associated protein-like 1.)
genome : 159,651,829 - 159,710,294 (58,466)
query : 1 - 544 (544/544)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000118528 (
ENST00000309950
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,829 - 159,672,505 (20,677)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000386036
(
AY324399
)
Representative transcript
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,829 - 159,672,505 (20,677)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC063096
Bos
sp. (Cow) : BC133652
Equus
sp. (Horse) : ENSECAT00000016455
Gallus
sp. (Chicken) : ENSGALT00000020516
Monodelphis
sp. (Opossum) : ENSMODT00000005642
Pongo
sp. (Orangutan) : ENSPPYT00000014946
Rattus
sp. (Rat) : XM_001068559
Macaca
sp. (Macaque) : XM_001092189
Pan
sp. (Chimpanzee) : XM_001147521
Canis
sp. (Dog) : XM_844590
HIX0029805
HIT000365517 (
NM_001017920
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,829 - 159,672,495 (20,667)
query : 1 - 542 (542/551)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000067420
(
AF086541
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,841 - 159,672,495 (20,655)
query : 1 - 530 (530/539)
4 exons
identity = 0.994
5'(1.000;1.000;0.984;0.993)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000501474
(
BC140719
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,842 - 159,672,426 (20,585)
query : 1 - 460 (460/460)
4 exons
identity = 0.996
5'(1.000;1.000;0.984;0.995)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.6667, cyto_plas 11.1667,
nucl 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000389310
(
BC127682
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,844 - 159,672,383 (20,540)
query : 1 - 414 (414/414)
4 exons
identity = 0.993
5'(1.000;1.000;0.984;0.988)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.6667, cyto_plas 11.1667,
nucl 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000389311
(
BC127683
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,844 - 159,672,383 (20,540)
query : 1 - 415 (415/415)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000715187
(
HQ179936
)
(Olfactory receptor 7G3; OST085; Olfactory receptor OR19-9;)
genome : 159,651,870 - 159,719,471 (67,602)
query : 1 - 776 (776/800)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000715188
(
HQ179937
)
(Olfactory receptor 7E24; Olfactory receptor OR19-14;)
genome : 159,651,870 - 159,719,471 (67,602)
query : 1 - 868 (868/892)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, mito 5, plas 4, nucl 2, golg 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000715186
(
HQ179935
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,870 - 159,672,506 (20,637)
query : 1 - 631 (631/649)
5 exons
identity = 0.987
5'(1.000;1.000;1.000;0.976;0.983)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, mito 6, nucl 5, extr 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000715185
(
HQ179934
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,870 - 159,672,506 (20,637)
query : 1 - 512 (512/528)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000715190
(
HQ179939
)
(Death-associated protein-like 1; Early epithelial differentiation-associated protein;)
genome : 159,651,870 - 159,672,506 (20,637)
query : 1 - 451 (451/467)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000715189
(
HQ179938
)
(Death-associated protein-like 1.)
genome : 159,651,870 - 159,663,851 (11,982)
query : 1 - 446 (446/466)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024130 : DAP1/DAPL1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.6667, cyto_plas 11.1667,
nucl 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000136391 (
ENST00000343761
)
(Olfactory receptor 7E24; Olfactory receptor OR19-14;)
genome : 159,660,810 - 159,719,293 (58,484)
query : 1 - 598 (598/598)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, nucl 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000523324_02 (
ENST00000425390
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,061 - 159,711,085 (1,025)
query : 1 - 1,026 (1,026/1,026)
1 exon
identity = 0.959
5'(0.959)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000643440_01 (
ENST00000544395
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,061 - 159,711,085 (1,025)
query : 1 - 1,023 (1,023/1,023)
1 exon
identity = 0.954
5'(0.954)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000631831_05 (
ENST00000532736
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,065 - 159,711,086 (1,022)
query : 1 - 1,024 (1,024/1,024)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000599539_06 (
ENST00000496207
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,069 - 159,711,083 (1,015)
query : 1 - 1,015 (1,015/1,015)
1 exon
identity = 0.958
5'(0.958)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000571222_01 (
ENST00000466578
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,071 - 159,711,083 (1,013)
query : 1 - 1,015 (1,015/1,015)
1 exon
identity = 0.952
5'(0.952)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000631938_01 (
ENST00000532847
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,074 - 159,711,071 (998)
query : 1 - 1,000 (1,000/1,000)
1 exon
identity = 0.957
5'(0.957)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000632964_06 (
ENST00000533891
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,077 - 159,711,034 (958)
query : 2 - 958 (957/958)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000669229_01 (
ENST00000555893
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,098 - 159,711,088 (991)
query : 1 - 993 (993/993)
1 exon
identity = 0.964
5'(0.964)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000610763_05 (
ENST00000511021
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,098 - 159,711,066 (969)
query : 1 - 970 (970/970)
1 exon
identity = 0.952
5'(0.952)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000629958_06 (
ENST00000530816
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,132 - 159,711,091 (960)
query : 16 - 976 (961/976)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 0.985
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000608281_05 (
ENST00000508347
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,122 - 159,711,025 (904)
query : 2 - 907 (906/907)
1 exon
identity = 0.951
5'(0.951)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000604846_08 (
ENST00000504655
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,122 - 159,711,088 (967)
query : 1 - 968 (968/968)
1 exon
identity = 0.960
5'(0.960)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000631500_05 (
ENST00000532397
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,122 - 159,711,048 (927)
query : 1 - 929 (929/929)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000605858_06 (
ENST00000505750
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,122 - 159,711,042 (921)
query : 1 - 922 (922/922)
1 exon
identity = 0.954
5'(0.954)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000609230_01 (
ENST00000509361
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,123 - 159,711,032 (910)
query : 1 - 911 (911/911)
1 exon
identity = 0.956
5'(0.956)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000624418_07 (
ENST00000525174
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,137 - 159,711,067 (931)
query : 1 - 932 (932/932)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000597775_06 (
ENST00000494376
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,137 - 159,711,046 (910)
query : 1 - 911 (911/911)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000606041_07 (
ENST00000505943
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,140 - 159,711,032 (893)
query : 1 - 894 (894/894)
1 exon
identity = 0.961
5'(0.961)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000509663 (
ENST00000411729
)
(Seven transmembrane helix receptor precursor.)
genome : 159,710,267 - 159,711,088 (822)
query : 1 - 822 (822/822)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000603134_01 (
ENST00000502808
)
(Olfactory receptor 7E24; Olfactory receptor OR19-14;)
genome : 159,718,846 - 159,719,803 (958)
query : 1 - 976 (976/976)
1 exon
identity = 0.955
5'(0.955)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, nucl 8.5, plas 7, cyto_nucl 5.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0029805
HIT000605341_01 (
ENST00000505191
)
(Hypothetical protein.)
genome : 159,718,922 - 159,719,800 (879)
query : 1 - 879 (879/879)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029805)
HIX0163228
HIT000552770 (
ENST00000454836
)
(Olfactory receptor family protein.)
genome : 159,731,154 - 159,732,182 (1,029)
query : 1 - 1,029 (1,029/1,029)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163228)
HIX0180272
pHIT000005040 ( pHIT000005040 )
Representative transcript
(Conserved hypothetical protein.)
genome : 159,858,483 - 159,860,834 (2,352)
query : 1 - 687 (687/687)
2 exons
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180272)
CAGE tag :
H08BA05H2310
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC059432
Tetraodon
sp. (Tetraodon) : CR716941
Macaca
sp. (Macaque) : ENSMMUT00000012332
Pan
sp. (Chimpanzee) : XR_023211
Bos
sp. (Cow) : XR_028464
HIX0180272
HIT000592915_02 (
ENST00000489308
)
(Hypothetical protein.)
genome : 159,860,235 - 159,861,230 (996)
query : 1 - 794 (794/794)
2 exons
identity = 0.977
5'(0.969;0.982)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, mito 9, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180272)
HIX0180272
HIT000475810_03 (
ENST00000392326
)
(Nascent polypeptide-associated complex NAC domain containing protein.)
genome : 159,860,287 - 159,861,065 (779)
query : 1 - 712 (712/712)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180272)
HIX0180272
HIT000476273_03 (
ENST00000392798
)
(Nascent polypeptide-associated complex NAC domain containing protein.)
genome : 159,860,487 - 159,860,832 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180272)
HIX0030378
HIT000097851
(
BC044300
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,868,062 - 159,869,780 (1,719)
query : 7 - 1,723 (1,717/1,738)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 2.5, cyto 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030378)
HIX0162200
HIT000510680 (
ENST00000412746
)
(Glutathione S-transferase, N-terminal domain containing protein.)
genome : 159,912,606 - 159,913,371 (766)
query : 1 - 441 (441/441)
2 exons
identity = 0.998
3'(1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, extr 11, cyto_nucl 10.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162200)
HIX0203989
eHIT000014917 ( ESTsASS_2_1018 )
Representative transcript
(Non-protein coding transcript.)
genome : 159,932,968 - 159,946,547 (13,580)
query : 1 - 525 (525/525)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203989)
ESTs used for assembly :
DB018827
HIX0214526
HIT000043034
(
AK123161
)
Representative transcript
(Protein TANC1 isoform 2.)
genome : 159,992,710 - 160,007,288 (14,579)
query : 1 - 1,736 (1,736/1,736)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214526)
HIX0214526
HIT000568861 (
ENST00000464096
)
(Conserved hypothetical protein.)
genome : 159,992,710 - 160,007,288 (14,579)
query : 1 - 1,736 (1,736/1,736)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9.5, cyto_nucl 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214526)
HIX0214526
HIT000006696
(
AK023422
)
(Protein TANC1 isoform 2.)
genome : 160,004,051 - 160,007,288 (3,238)
query : 1 - 2,141 (2,141/2,141)
2 exons
identity = 0.999
5'(0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8.33333, cyto 7.5, nucl 7,
cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214526)
HIX0214526
HIT000570641 (
ENST00000465963
)
(Conserved hypothetical protein.)
genome : 160,004,051 - 160,007,288 (3,238)
query : 1 - 2,141 (2,141/2,141)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8.33333, cyto 7.5, nucl 7,
cyto_pero 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214526)
HIX0214505
HIT000002876
(
AK000401
)
Representative transcript
(Protein TANC1 isoform 2.)
genome : 160,035,064 - 160,089,169 (54,106)
query : 30 - 2,265 (2,236/2,281)
2 exons
identity = 0.993
5'(0.992;0.993)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.16667, cyto 8, extr 7, mito 6.5,
cyto_pero 6.33333, nucl 6, E.R._mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214505)
HIX0214505
HIT000574565 (
ENST00000470074
)
(Ankyrin repeat-containing domain containing protein.)
genome : 160,055,529 - 160,089,166 (33,638)
query : 1 - 4,351 (4,351/4,351)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214505)
HIX0002528
HIT000016678
(
AK091811
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,061,799 - 160,064,208 (2,410)
query : 1 - 2,410 (2,410/2,410)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002528)
HIX0214505
HIT000056885
(
BX648238
)
(Protein TANC1; Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 1;)
genome : 160,080,904 - 160,089,167 (8,264)
query : 1 - 7,590 (7,590/7,610)
2 exons
identity = 0.997
5'(0.997;0.996)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214505)
HIX0214505
HIT000599728 (
ENST00000496406
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 160,080,904 - 160,089,170 (8,267)
query : 1 - 7,586 (7,586/7,586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214505)
HIX0214505
HIT000019140
(
AK094285
)
(Conserved hypothetical protein.)
genome : 160,086,597 - 160,088,526 (1,930)
query : 1 - 1,935 (1,935/1,935)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14.3333, cyto 5.5,
cyto_pero 4.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214505)
HIX0214505
HIT000028170
(
AL833258
)
(Conserved hypothetical protein.)
genome : 160,087,518 - 160,089,169 (1,652)
query : 1 - 1,656 (1,656/1,794)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, pero 6, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214505)
HIX0002530
HIT000040798
(
BC029520
)
(WD repeat, SAM and U-box domain-containing protein 1.)
genome : 160,092,311 - 160,143,214 (50,904)
query : 1 - 1,533 (1,533/1,564)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;0.989;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR001680 : WD40 repeat
IPR003613 : U box domain
IPR011510 : Sterile alpha motif, type 2
IPR013761 : Sterile alpha motif/pointed domain
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0000151 : Cellular Component : ubiquitin ligase complex
0004842 : Molecular Function : ubiquitin-protein transferase activity
0005515 : Molecular Function : protein binding
0016567 : Biological Process : protein ubiquitination
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 7.5, nucl 6, cyto_pero 6, lyso 3,
mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000559427 (
NM_001128212
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,304 - 160,143,236 (50,933)
query : 1 - 1,838 (1,838/1,854)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000559428 (
NM_001128213
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,304 - 160,143,103 (50,800)
query : 1 - 1,928 (1,928/1,944)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000213794 (
NM_152528
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,304 - 160,143,063 (50,760)
query : 1 - 1,820 (1,820/1,836)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000313256 (
ENST00000359774
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,304 - 160,143,310 (51,007)
query : 1 - 1,912 (1,912/1,912)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000311889 (
ENST00000358147
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,309 - 160,143,214 (50,906)
query : 1 - 1,535 (1,535/1,535)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 7.5, nucl 6, cyto_pero 6, lyso 3,
mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000049254
(
AK129983
)
Representative transcript
(WD repeat, SAM and U-box domain-containing protein 1;)
genome : 160,092,312 - 160,143,103 (50,792)
query : 1 - 1,919 (1,919/1,919)
11 exons
identity = 0.998
3'(0.997;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR001680 : WD40 repeat
IPR003613 : U box domain
IPR011510 : Sterile alpha motif, type 2
IPR013761 : Sterile alpha motif/pointed domain
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0000151 : Cellular Component : ubiquitin ligase complex
0004842 : Molecular Function : ubiquitin-protein transferase activity
0005515 : Molecular Function : protein binding
0016567 : Biological Process : protein ubiquitination
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000508010 (
ENST00000409990
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,312 - 160,143,103 (50,792)
query : 1 - 1,920 (1,920/1,920)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000018361
(
AK093494
)
(WD repeat, SAM and U-box domain-containing protein 1;)
genome : 160,092,312 - 160,143,063 (50,752)
query : 1 - 1,811 (1,811/1,811)
11 exons
identity = 0.998
3'(0.997;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR001680 : WD40 repeat
IPR003613 : U box domain
IPR011510 : Sterile alpha motif, type 2
IPR013761 : Sterile alpha motif/pointed domain
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0000151 : Cellular Component : ubiquitin ligase complex
0004842 : Molecular Function : ubiquitin-protein transferase activity
0005515 : Molecular Function : protein binding
0016567 : Biological Process : protein ubiquitination
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000476271 (
ENST00000392796
)
(Sterile alpha motif, type 2 domain containing protein.)
genome : 160,092,312 - 160,143,063 (50,752)
query : 1 - 1,812 (1,812/1,812)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 10, cyto_nucl 9.5, cyto_pero 7.83333,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0002530
HIT000507158 (
ENST00000409124
)
(Sterile alpha motif, type 1 domain containing protein.)
genome : 160,092,345 - 160,143,180 (50,836)
query : 1 - 1,600 (1,600/1,600)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 9.5, cyto_pero 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002530)
HIX0214504
HIT000002861
(
AK000386
)
(Conserved hypothetical protein.)
genome : 160,175,491 - 160,177,686 (2,196)
query : 1 - 2,196 (2,196/2,216)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000003151
(
AK000676
)
(Conserved hypothetical protein.)
genome : 160,175,491 - 160,177,686 (2,196)
query : 1 - 2,195 (2,195/2,213)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 13, cyto_nucl 9.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000006840
(
AK023566
)
(Bromodomain containing protein.)
genome : 160,175,562 - 160,177,834 (2,273)
query : 1 - 2,273 (2,273/2,287)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000024294
(
AL080173
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 160,175,765 - 160,205,326 (29,562)
query : 1 - 2,363 (2,363/2,373)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR018359 : Bromodomain, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000662437 (
ENST00000548440
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 160,178,369 - 160,189,507 (11,139)
query : 1 - 1,037 (1,037/1,037)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, cyto 10.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000081930
(
AK074895
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 160,182,274 - 160,241,874 (59,601)
query : 1 - 2,622 (2,622/2,622)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000578728 (
ENST00000474437
)
(Conserved hypothetical protein.)
genome : 160,182,275 - 160,204,126 (21,852)
query : 1 - 638 (638/638)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, plas 7, mito 7, cyto_nucl 7, extr_plas 5.5,
mito_pero 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000524582 (
ENST00000426648
)
(Conserved hypothetical protein.)
genome : 160,193,471 - 160,204,104 (10,634)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 9, extr 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000010884
(
AK027612
)
Representative transcript
(Methyl-CpG DNA binding domain containing protein.)
genome : 160,229,549 - 160,289,301 (59,753)
query : 1 - 2,253 (2,253/2,266)
18 exons
identity = 0.999
3'(0.987;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR001739 : Methyl-CpG DNA binding
IPR004022 : DDT domain
IPR016177 : DNA-binding domain
IPR018500 : DDT domain, subgroup
IPR018501 : DDT domain superfamily
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 10.5, cyto_nucl 9.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000665110 (
ENST00000551504
)
(DDT domain containing protein.)
genome : 160,241,676 - 160,254,717 (13,042)
query : 1 - 742 (742/742)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000589698 (
ENST00000485917
)
(DDT domain containing protein.)
genome : 160,241,803 - 160,248,718 (6,916)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, extr 7, nucl 6.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0162386
HIT000517954 (
ENST00000420020
)
(Conserved hypothetical protein.)
genome : 160,242,878 - 160,261,143 (18,266)
query : 1 - 555 (555/555)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 8.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162386)
HIX0214504
HIT000113995 (
ENST00000294905
)
(DDT domain containing protein.)
genome : 160,242,885 - 160,257,161 (14,277)
query : 1 - 631 (631/631)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0162386
HIT000706721 (
ENST00000594921
)
(Conserved hypothetical protein.)
genome : 160,251,932 - 160,261,147 (9,216)
query : 1 - 1,149 (1,149/1,149)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5, mito 4, cyto 2, golg 2, E.R._mito 2,
mito_pero 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162386)
HIX0214504
HIT000586428 (
ENST00000482501
)
(Conserved hypothetical protein.)
genome : 160,257,110 - 160,276,378 (19,269)
query : 1 - 520 (520/520)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8.5, cyto_nucl 6.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000577304 (
ENST00000472953
)
(Methyl-CpG DNA binding domain containing protein.)
genome : 160,260,899 - 160,292,064 (31,166)
query : 1 - 4,190 (4,190/4,206)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214504
HIT000539077 (
ENST00000441143
)
(Methyl-CpG DNA binding domain containing protein.)
genome : 160,268,943 - 160,289,461 (20,519)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214504)
HIX0214677
HIT000263084
(
BC068527
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,293,921 - 160,412,375 (118,455)
query : 1 - 2,354 (2,354/2,369)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000571801 (
ENST00000467184
)
(Conserved hypothetical protein.)
genome : 160,293,921 - 160,412,375 (118,455)
query : 1 - 2,354 (2,354/2,369)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000586430 (
ENST00000482503
)
(Conserved hypothetical protein.)
genome : 160,294,814 - 160,373,170 (78,357)
query : 1 - 1,670 (1,670/1,670)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000640113 (
ENST00000541068
)
(Conserved hypothetical protein.)
genome : 160,303,347 - 160,473,016 (169,670)
query : 1 - 594 (594/594)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000535773 (
ENST00000437839
)
(Conserved hypothetical protein.)
genome : 160,304,827 - 160,472,071 (167,245)
query : 1 - 640 (640/640)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000055897
(
BX647250
)
(F-actin-capping protein subunit alpha family protein.)
genome : 160,314,854 - 160,472,961 (158,108)
query : 1 - 6,819 (6,819/6,838)
4 exons
identity = 0.998
3'(0.998;1.000;0.977;1.000)5'
coverage = 1.000
InterPro :
IPR002189 : F-actin-capping protein subunit alpha
IPR017865 : F-actin capping protein, alpha subunit, conserved site
GO :
0003779 : Molecular Function : actin binding
0008290 : Cellular Component : F-actin capping protein complex
0030036 : Biological Process : actin cytoskeleton organization
0071203 : Cellular Component : WASH complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 7.5, extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000587213 (
ENST00000483316
)
(F-actin-capping protein subunit alpha family protein.)
genome : 160,314,854 - 160,472,961 (158,108)
query : 1 - 6,819 (6,819/6,838)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 7.5, extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000518569 (
ENST00000420635
)
(F-actin-capping protein subunit alpha family protein.)
genome : 160,318,928 - 160,319,767 (840)
query : 1 - 840 (840/840)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 7.5, extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0214677
HIT000665826 (
ENST00000552327
)
(Hypothetical short protein.)
genome : 160,411,954 - 160,471,935 (59,982)
query : 1 - 454 (454/454)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214677)
HIX0029999
HIT000516408 (
ENST00000418474
)
(Hypothetical short protein.)
genome : 160,471,807 - 160,473,593 (1,787)
query : 1 - 1,494 (1,494/1,494)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029999)
HIX0214671
HIT000550950 (
ENST00000453016
)
(Hypothetical short protein.)
genome : 160,527,219 - 160,568,941 (41,723)
query : 1 - 401 (401/401)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214671)
HIX0214671
HIT000516704 (
ENST00000418770
)
(Hypothetical short protein.)
genome : 160,527,223 - 160,568,529 (41,307)
query : 1 - 375 (375/375)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214671)
HIX0163095
HIT000547766 (
ENST00000449832
)
(Ribosomal protein S3Ae family protein.)
genome : 160,545,728 - 160,546,802 (1,075)
query : 1 - 765 (765/765)
2 exons
identity = 0.992
3'(1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163095)
HIX0214671
HIT000054435
(
BX537650
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,549,709 - 160,568,946 (19,238)
query : 1 - 2,523 (2,523/2,541)
3 exons
identity = 0.998
3'(0.998;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 6, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214671)
HIX0002532
HIT000493675
(
AK299051
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,569,000 - 160,624,193 (55,194)
query : 1 - 2,370 (2,370/2,370)
8 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000638110 (
ENST00000539065
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,000 - 160,624,193 (55,194)
query : 1 - 2,370 (2,370/2,370)
8 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000425633
(
AK292836
)
Representative transcript
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,000 - 160,623,880 (54,881)
query : 1 - 2,402 (2,402/2,402)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179002
Mus
sp. (Mouse) : AK143177
Rattus
sp. (Rat) : BC083842
Danio
sp. (Zebrafish) : BC155835
Pongo
sp. (Orangutan) : CR859270
Bos
sp. (Cow) : ENSBTAT00000011533
Gallus
sp. (Chicken) : ENSGALT00000020547
Pan
sp. (Chimpanzee) : ENSPTRT00000023289
Monodelphis
sp. (Opossum) : XM_001366458
Equus
sp. (Horse) : XM_001492389
Canis
sp. (Dog) : XM_843631
HIX0002532
HIT000507209 (
ENST00000409175
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,000 - 160,623,880 (54,881)
query : 1 - 2,402 (2,402/2,402)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000107421 (
ENST00000259050
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,010 - 160,625,359 (56,350)
query : 1 - 3,743 (3,743/3,743)
10 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000208893 (
NM_022826
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,010 - 160,625,084 (56,075)
query : 1 - 3,468 (3,468/3,484)
10 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000006247
(
AK022973
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,010 - 160,624,344 (55,335)
query : 1 - 2,728 (2,728/2,728)
10 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000330660
(
AK222880
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,018 - 160,623,889 (54,872)
query : 1 - 2,265 (2,265/2,265)
10 exons
identity = 0.998
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, mito 7, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000518971 (
ENST00000421037
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,569,018 - 160,599,722 (30,705)
query : 1 - 559 (559/559)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.6667, nucl 11, cyto 8, mito 8,
cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000578066 (
ENST00000473749
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,569,034 - 160,604,637 (35,604)
query : 1 - 821 (821/821)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000261717
(
BC065014
)
(E3 ubiquitin-protein ligase MARCH7; EC=6.3.2.-; Axotrophin; Membrane-associated RING finger protein 7; Membrane-associated RING-CH protein VII; MARCH-VII; RING finger protein 177;)
genome : 160,569,044 - 160,624,273 (55,230)
query : 1 - 2,623 (2,623/2,639)
10 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000066989
(
AF086110
)
(Conserved hypothetical protein.)
genome : 160,570,687 - 160,571,433 (747)
query : 1 - 747 (747/756)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000006674
(
AK023400
)
(Conserved hypothetical protein.)
genome : 160,589,471 - 160,591,328 (1,858)
query : 1 - 1,848 (1,848/1,848)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000499995
(
AK316382
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,590,447 - 160,623,898 (33,452)
query : 3 - 2,156 (2,154/2,156)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000429104
(
AK310238
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,590,445 - 160,605,194 (14,750)
query : 1 - 1,388 (1,388/1,388)
4 exons
identity = 0.997
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000496971
(
AK302347
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,590,453 - 160,623,911 (33,459)
query : 1 - 2,161 (2,161/2,161)
9 exons
identity = 0.999
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011016 : Zinc finger, RING-CH-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002532
HIT000507621 (
ENST00000409591
)
(E3 ubiquitin-protein ligase MARCH7.)
genome : 160,590,476 - 160,623,920 (33,445)
query : 1 - 2,147 (2,147/2,147)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002532)
HIX0002526
HIT000093451
(
BC034473
)
(Plakophilin-4; p0071;)
genome : 159,313,420 - 159,523,172 (209,753)
query : 6 - 3,145 (3,140/3,160)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;0.996;0.992;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000200439 (
NM_003628
)
(Plakophilin-4; p0071;)
genome : 159,313,476 - 159,537,939 (224,464)
query : 1 - 4,589 (4,589/4,604)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000316183 (
NM_001005476
)
(Plakophilin-4; p0071;)
genome : 159,313,476 - 159,537,939 (224,464)
query : 1 - 4,460 (4,460/4,475)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000098868
(
BC048013
)
Representative transcript
(Plakophilin-4; p0071;)
genome : 159,313,476 - 159,537,554 (224,079)
query : 1 - 4,124 (4,124/4,139)
22 exons
identity = 0.997
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;0.992;1.000;1.000;1.000;0.995;
0.994;1.000;1.000;1.000;1.000;0.985;1.000;
0.995)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171450
Gallus
sp. (Chicken) : AJ720205
Mus
sp. (Mouse) : BC079848
Bos
sp. (Cow) : ENSBTAT00000018330
Equus
sp. (Horse) : ENSECAT00000015492
Oryzias
sp. (Medaka) : ENSORLT00000002328
Pongo
sp. (Orangutan) : ENSPPYT00000014944
Rattus
sp. (Rat) : ENSRNOT00000059246
Tetraodon
sp. (Tetraodon) : GSTENT00030569001
Takifugu
sp. (Fugu) : SINFRUT00000179467
Pan
sp. (Chimpanzee) : XM_001147292
Monodelphis
sp. (Opossum) : XM_001366119
Danio
sp. (Zebrafish) : XM_684979
Canis
sp. (Dog) : XM_843432
HIX0002526
HIT000524182 (
ENST00000426248
)
(Plakophilin-4; p0071;)
genome : 159,313,476 - 159,537,564 (224,089)
query : 1 - 4,134 (4,134/4,134)
22 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;0.985;0.941;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000323893
(
X81889
)
(Plakophilin-4; p0071;)
genome : 159,313,609 - 159,537,343 (223,735)
query : 15 - 3,873 (3,859/3,907)
22 exons
identity = 0.995
5'(0.984;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;0.991;0.985;1.000;1.000;0.983;1.000;
0.994;0.974;1.000;1.000;1.000;1.000;1.000;
0.988)3'
coverage = 0.996
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000053406
(
BC050308
)
(Plakophilin-4; p0071;)
genome : 159,313,611 - 159,537,939 (224,329)
query : 2 - 4,326 (4,325/4,342)
21 exons
identity = 0.998
5'(1.000;0.985;1.000;1.000;1.000;1.000;0.995;
1.000;0.996;0.992;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000396655 (
ENST00000389757
)
(Plakophilin-4; p0071;)
genome : 159,313,611 - 159,539,391 (225,781)
query : 1 - 5,777 (5,777/5,777)
21 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;0.985;0.941;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000396657 (
ENST00000389759
)
(Plakophilin-4; p0071;)
genome : 159,313,624 - 159,537,941 (224,318)
query : 1 - 4,443 (4,443/4,443)
22 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;0.985;0.941;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000096604
(
BC041163
)
(Catenin delta-2; Fragment;)
genome : 159,313,645 - 159,519,565 (205,921)
query : 1 - 2,346 (2,346/2,362)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000550096 (
ENST00000452162
)
(Catenin delta-2; Fragment;)
genome : 159,313,645 - 159,519,578 (205,934)
query : 1 - 2,359 (2,359/2,359)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 18, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000011525
(
AK054911
)
(Plakophilin-4; p0071;)
genome : 159,313,967 - 159,519,515 (205,549)
query : 1 - 3,099 (3,099/3,099)
14 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;0.996;0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, cyto 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000519396 (
ENST00000421462
)
(Plakophilin-4; p0071;)
genome : 159,313,967 - 159,519,515 (205,549)
query : 1 - 3,099 (3,099/3,099)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, cyto 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000048593
(
AK128720
)
(Plakophilin-4; p0071;)
genome : 159,433,771 - 159,537,938 (104,168)
query : 298 - 4,370 (4,073/4,370)
19 exons
identity = 0.998
5'(0.960;1.000;1.000;1.000;1.000;1.000;0.996;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;0.999)3'
coverage = 0.932
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000320795
(
U60472
)
(Plakophilin-4; p0071;)
genome : 159,477,775 - 159,519,576 (41,802)
query : 1 - 1,937 (1,937/1,937)
9 exons
identity = 0.991
5'(1.000;0.987;0.989;0.996;0.992;1.000;0.979;
0.992;0.988)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000044110
(
AK124237
)
(Plakophilin-4; p0071;)
genome : 159,518,754 - 159,537,938 (19,185)
query : 1 - 2,772 (2,772/2,772)
9 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR028435 : Plakophilin/Delta catenin
IPR028443 : Plakophilin-4
GO :
0005515 : Molecular Function : protein binding
0007155 : Biological Process : cell adhesion
0016337 : Biological Process : single organismal cell-cell adhesion
0032321 : Biological Process : positive regulation of Rho GTPase activity
0032467 : Biological Process : positive regulation of cytokinesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000584200 (
ENST00000480171
)
(Plakophilin-4; p0071;)
genome : 159,518,754 - 159,537,938 (19,185)
query : 1 - 2,772 (2,772/2,772)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;0.985;0.941;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0002526
HIT000598497 (
ENST00000495123
)
(Plakophilin-4; Armadillo-related protein;)
genome : 159,519,502 - 159,525,818 (6,317)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002526)
HIX0022500
HIT000094802
(
BC037329
)
(Protein TANC1 isoform 2.)
genome : 159,825,146 - 160,089,169 (264,024)
query : 1 - 4,170 (4,170/4,214)
13 exons
identity = 0.995
5'(0.993;1.000;1.000;1.000;1.000;0.996;1.000;
0.996;1.000;0.996;0.994;0.950;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000317690 (
NM_033394
)
(Protein TANC1; Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 1;)
genome : 159,825,146 - 160,089,169 (264,024)
query : 1 - 7,506 (7,506/7,517)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000561530 (
NM_001145909
)
(Protein TANC1; Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 1;)
genome : 159,825,146 - 160,089,169 (264,024)
query : 1 - 7,487 (7,487/7,498)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000552234 (
ENST00000454300
)
(Protein TANC1 isoform 1.)
genome : 159,825,146 - 160,089,166 (264,021)
query : 1 - 7,185 (7,185/7,185)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000048732
(
AK128859
)
(Protein TANC1 isoform 1.)
genome : 159,825,155 - 160,089,166 (264,012)
query : 4 - 5,386 (5,383/5,386)
16 exons
identity = 0.998
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
0.904;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, extr 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000108967 (
ENST00000263635
)
(Protein TANC1; Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 1;)
genome : 159,825,183 - 160,089,170 (263,988)
query : 1 - 7,470 (7,470/7,470)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000503293
(
BC150597
)
Representative transcript
(Protein TANC1 isoform 2.)
genome : 159,857,602 - 160,088,052 (230,451)
query : 1 - 6,211 (6,211/6,211)
26 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000;1.000;0.996;
1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB098072
Mus
sp. (Mouse) : BC079914
Gallus
sp. (Chicken) : CR354167
Tetraodon
sp. (Tetraodon) : CR708039
Equus
sp. (Horse) : ENSECAT00000019966
Monodelphis
sp. (Opossum) : ENSMODT00000006189
Oryzias
sp. (Medaka) : ENSORLT00000005388
Oryzias
sp. (Medaka) : ENSORLT00000020992
Pongo
sp. (Orangutan) : ENSPPYT00000014947
Tetraodon
sp. (Tetraodon) : GSTENT00030570001
Takifugu
sp. (Fugu) : SINFRUT00000159963
Takifugu
sp. (Fugu) : SINFRUT00000174519
Macaca
sp. (Macaque) : XM_001093218
Danio
sp. (Zebrafish) : XM_001920196
Pan
sp. (Chimpanzee) : XM_515847
Canis
sp. (Dog) : XM_535925
HIX0022500
HIT000427765
(
AK308899
)
(Protein TANC1 isoform 1.)
genome : 159,922,424 - 160,084,383 (161,960)
query : 1 - 3,374 (3,374/3,374)
20 exons
identity = 0.999
5'(1.000;1.000;0.990;1.000;0.996;1.000;1.000;
1.000;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 13.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000056974
(
BX648327
)
(Protein TANC1 isoform 1.)
genome : 160,005,755 - 160,089,167 (83,413)
query : 1 - 6,768 (6,768/6,786)
22 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;1.000;1.000;0.996;
1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0022500
HIT000001444
(
AB051515
)
(Protein TANC1 isoform 2.)
genome : 160,007,035 - 160,089,168 (82,134)
query : 1 - 6,585 (6,585/6,585)
21 exons
identity = 0.998
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022500)
HIX0002531
HIT000059047
(
AB032255
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,175,491 - 160,333,618 (158,128)
query : 1 - 7,570 (7,570/7,585)
33 exons
identity = 0.984
3'(1.000;1.000;0.992;1.000;0.978;0.995;0.994;
1.000;0.996;1.000;0.986;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.998;0.997;1.000;0.864;0.684)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001739 : Methyl-CpG DNA binding
IPR001965 : Zinc finger, PHD-type
IPR004022 : DDT domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR016177 : DNA-binding domain
IPR018359 : Bromodomain, conserved site
IPR018500 : DDT domain, subgroup
IPR018501 : DDT domain superfamily
IPR019787 : Zinc finger, PHD-finger
GO :
0003677 : Molecular Function : DNA binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000476258 (
ENST00000392783
)
(Bromodomain adjacent to zinc finger domain protein 2B; hWALp4;)
genome : 160,175,490 - 160,473,203 (297,714)
query : 1 - 8,289 (8,289/8,289)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000476257 (
ENST00000392782
)
(Bromodomain adjacent to zinc finger domain protein 2B; hWALp4;)
genome : 160,175,490 - 160,473,080 (297,591)
query : 1 - 8,058 (8,058/8,058)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000136069 (
ENST00000343439
)
(Bromodomain adjacent to zinc finger domain protein 2B; hWALp4;)
genome : 160,175,490 - 160,473,059 (297,570)
query : 1 - 7,845 (7,845/7,845)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000204407 (
NM_013450
)
(Bromodomain adjacent to zinc finger domain protein 2B; hWALp4;)
genome : 160,175,490 - 160,473,059 (297,570)
query : 1 - 8,145 (8,145/8,145)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000309916 (
ENST00000355831
)
(Bromodomain adjacent to zinc finger domain protein 2B; hWALp4;)
genome : 160,175,490 - 160,473,059 (297,570)
query : 1 - 8,043 (8,043/8,043)
36 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000001191
(
AB040909
)
Representative transcript
(Bromodomain adjacent to zinc finger domain protein 2B; hWALp4;)
genome : 160,175,563 - 160,473,080 (297,518)
query : 1 - 7,985 (7,985/7,985)
36 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997;1.000;
0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173844
Gallus
sp. (Chicken) : AF224275
Mus
sp. (Mouse) : AK173180
Bos
sp. (Cow) : BC148866
Equus
sp. (Horse) : ENSECAT00000013334
Oryzias
sp. (Medaka) : ENSORLT00000005334
Pongo
sp. (Orangutan) : ENSPPYT00000014949
Pan
sp. (Chimpanzee) : ENSPTRT00000023286
Takifugu
sp. (Fugu) : SINFRUT00000167693
Rattus
sp. (Rat) : XM_001058884
Monodelphis
sp. (Opossum) : XM_001366402
Canis
sp. (Dog) : XM_851522
HIX0002531
HIT000035882
(
BC012576
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,255,348 - 160,310,172 (54,825)
query : 4 - 2,373 (2,370/2,403)
14 exons
identity = 0.999
3'(1.000;1.000;0.984;0.989;1.000;1.000;1.000;
1.000;1.000;0.997;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001739 : Methyl-CpG DNA binding
IPR016177 : DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000047424
(
AK127551
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,255,347 - 160,471,952 (216,606)
query : 1 - 2,772 (2,772/2,772)
17 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;0.998;1.000;1.000;1.000;0.914;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001739 : Methyl-CpG DNA binding
IPR016177 : DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000029111
(
AL834381
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,257,109 - 160,473,007 (215,899)
query : 1 - 3,199 (3,199/3,217)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;1.000;1.000;1.000;0.995;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001739 : Methyl-CpG DNA binding
IPR016177 : DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000426549
(
AK307683
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,257,109 - 160,373,170 (116,062)
query : 1 - 2,541 (2,541/2,543)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR001739 : Methyl-CpG DNA binding
IPR016177 : DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000055579
(
BX641037
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,260,901 - 160,568,935 (308,035)
query : 1 - 6,505 (6,505/6,525)
19 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;0.997;1.000;1.000;1.000;0.995;1.000;
1.000;0.997;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR001739 : Methyl-CpG DNA binding
IPR016177 : DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0002531
HIT000338778
(
BC107570
)
(Bromodomain adjacent to zinc finger domain protein 2B.)
genome : 160,289,446 - 160,472,028 (182,583)
query : 5 - 1,706 (1,702/1,735)
8 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002531)
HIX0180272
pHIT000005040 ( pHIT000005040 )
Representative transcript
(Conserved hypothetical protein.)
genome : 159,858,483 - 159,860,834 (2,352)
query : 1 - 687 (687/687)
2 exons
InterPro :
IPR002715 : Nascent polypeptide-associated complex NAC domain
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180272)
CAGE tag :
H05BB25J1913,H05BB42N2206,H05BD57G1103
H08BA01A1904,H08BA05H2310
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC059432
Tetraodon
sp. (Tetraodon) : CR716941
Macaca
sp. (Macaque) : ENSMMUT00000012332
Pan
sp. (Chimpanzee) : XR_023211
Bos
sp. (Cow) : XR_028464
HIX0203989
eHIT000014917 ( ESTsASS_2_1018 )
Representative transcript
(Non-protein coding transcript.)
genome : 159,932,968 - 159,946,547 (13,580)
query : 1 - 525 (525/525)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203989)
ESTs used for assembly :
DB018827
AC005539.1
159000001-159000647 F -
NCBI
AC069146.6
159000648-159121417 F +
NCBI
AC019044.6
159121418-159245914 F +
NCBI
AC008070.4
159245915-159400578 F +
NCBI
AC005042.2
159400579-159592797 F +
NCBI
AC079877.5
159592798-159674094 F +
NCBI
AC064843.5
159674095-159738992 F +
NCBI
AC105346.3
159738993-159813417 F +
NCBI
AC010093.8
159813418-159972347 F +
NCBI
AC009307.4
159972348-160126013 F +
NCBI
AC008277.4
160126014-160302902 F +
NCBI
AC009506.5
160302903-160494466 F +
NCBI
AC009961.11
160494467-160600000 F +
NCBI