bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0163137
HIT000549143 (
ENST00000451209
)
(Ribosomal protein S10 domain containing protein.)
genome : 72,211,312 - 72,211,564 (253)
query : 1 - 253 (253/253)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 10, extr 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163137)
HIX0029835
HIT000207688 (
NM_019885
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,356,367 - 72,374,991 (18,625)
query : 1 - 4,556 (4,556/4,567)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 11, plas 2, pero 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000725435 (
NM_001277742
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,356,367 - 72,374,991 (18,625)
query : 1 - 4,331 (4,331/4,342)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, extr 12, plas 2, pero 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000102095 (
ENST00000001146
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,356,367 - 72,375,167 (18,801)
query : 1 - 4,732 (4,732/4,732)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 11, plas 2, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000075090
(
AF252297
)
Representative transcript
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,356,450 - 72,374,963 (18,514)
query : 1 - 4,445 (4,445/4,445)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 11, plas 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY245532
Mus
sp. (Mouse) : BC059246
Danio
sp. (Zebrafish) : BC129131
Oryzias
sp. (Medaka) : EF535797
Macaca
sp. (Macaque) : ENSMMUT00000017005
Pongo
sp. (Orangutan) : ENSPPYT00000014282
Tetraodon
sp. (Tetraodon) : GSTENT00021185001
Takifugu
sp. (Fugu) : SINFRUT00000134575
Pan
sp. (Chimpanzee) : XM_001149367
Equus
sp. (Horse) : XM_001488817
Gallus
sp. (Chicken) : XM_426366
Canis
sp. (Dog) : XM_540236
Bos
sp. (Cow) : XM_613518
HIX0029835
HIT000306632
(
CR749631
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,356,524 - 72,370,213 (13,690)
query : 1 - 4,030 (4,030/4,087)
5 exons
identity = 0.996
3'(0.996;1.000;0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.1667, cyto 11, mito 8, cyto_pero 7.83333,
mito_nucl 7.83333, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000510187 (
ENST00000412253
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,356,522 - 72,370,213 (13,692)
query : 1 - 4,025 (4,025/4,025)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.1667, cyto 12, cyto_pero 8.33333,
mito_nucl 8.33333, nucl 8, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000339314
(
BC109205
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,359,196 - 72,374,963 (15,768)
query : 1 - 1,699 (1,699/1,699)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 11, plas 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000263594
(
BC069443
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,359,197 - 72,374,963 (15,767)
query : 1 - 1,698 (1,698/1,698)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 11, plas 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000489557
(
AK294933
)
(Cytochrome P450 26B1 isoform 2.)
genome : 72,359,276 - 72,371,544 (12,269)
query : 1 - 1,617 (1,617/1,617)
5 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, E.R._mito 5.5, cyto_pero 2.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000490307
(
AK295683
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,359,280 - 72,371,189 (11,910)
query : 1 - 1,258 (1,258/1,258)
5 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 7, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000489438
(
AK294814
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,359,324 - 72,374,963 (15,640)
query : 1 - 1,346 (1,346/1,346)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, extr 12, plas 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000645352 (
ENST00000546307
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,359,324 - 72,374,963 (15,640)
query : 1 - 1,346 (1,346/1,346)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, extr 12, plas 2, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000432299
(
AK313433
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,359,356 - 72,374,966 (15,611)
query : 1 - 1,542 (1,542/1,542)
6 exons
identity = 0.999
3'(1.000;1.000;0.994;0.996;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, extr 11, plas 3, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000646014
(
FJ467289
)
(Cytochrome P450 26B1 isoform 2.)
genome : 72,359,357 - 72,374,963 (15,607)
query : 1 - 1,313 (1,313/1,314)
5 exons
identity = 0.998
3'(0.997;1.000;0.994;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001128 : Cytochrome P450
IPR002403 : Cytochrome P450, E-class, group IV
IPR017972 : Cytochrome P450, conserved site
GO :
0004497 : Molecular Function : monooxygenase activity
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14, extr 12, plas 2, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000578796 (
ENST00000474509
)
(Cytochrome P450 26B1; EC=1.14.-.-; Cytochrome P450 26A2; Cytochrome P450 retinoic acid-inactivating 2; Cytochrome P450RAI-2; Retinoic acid-metabolizing cytochrome;)
genome : 72,361,980 - 72,374,991 (13,012)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.-.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, E.R. 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0029835
HIT000566398 (
ENST00000461519
)
(Cytochrome P450 26B1 isoform 2.)
genome : 72,362,409 - 72,371,544 (9,136)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, E.R._mito 3, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029835)
HIX0214935
HIT000091944
(
BC029921
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,403,113 - 72,405,237 (2,125)
query : 1 - 2,126 (2,126/2,140)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214935)
HIX0214851
HIT000594460 (
ENST00000490919
)
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,406,144 - 72,581,407 (175,264)
query : 1 - 695 (695/695)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214851)
HIX0214851
HIT000575770 (
ENST00000471335
)
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,406,258 - 72,562,418 (156,161)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, mito 4, nucl 3.5, extr 2,
cysk 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214851)
HIX0214851
HIT000595748 (
ENST00000492257
)
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,406,302 - 72,490,566 (84,265)
query : 1 - 562 (562/562)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, mito 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214851)
HIX0162198
HIT000510571 (
ENST00000412637
)
(Ribosomal protein S8 family protein.)
genome : 72,515,914 - 72,516,239 (326)
query : 1 - 326 (326/326)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162198)
HIX0002154
HIT000569100 (
ENST00000464347
)
(Exocyst complex component 6B.)
genome : 72,606,938 - 72,722,668 (115,731)
query : 1 - 464 (464/464)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 5, extr 3, mito 2,
pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002154)
HIX0002154
HIT000508122 (
ENST00000410104
)
(Exocyst complex component 6B.)
genome : 72,688,605 - 73,053,170 (364,566)
query : 1 - 5,795 (5,795/5,795)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.8333, cyto 15.5, nucl 14, cyto_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002154)
HIX0002154
HIT000000636
(
AB023136
)
Representative transcript
(Exocyst complex component 6B.)
genome : 72,688,605 - 73,053,154 (364,550)
query : 1 - 5,782 (5,782/5,782)
18 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.8333, cyto 15.5, nucl 14, cyto_pero 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002154)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC145693
Gallus
sp. (Chicken) : CR406069
Pongo
sp. (Orangutan) : CR857921
Bos
sp. (Cow) : ENSBTAT00000003039
Bos
sp. (Cow) : ENSBTAT00000047228
Oryzias
sp. (Medaka) : ENSORLT00000018161
Rattus
sp. (Rat) : ENSRNOT00000057553
Takifugu
sp. (Fugu) : SINFRUT00000134576
Monodelphis
sp. (Opossum) : XM_001369971
Equus
sp. (Horse) : XM_001492091
Pan
sp. (Chimpanzee) : XM_515544
Canis
sp. (Dog) : XM_540235
HIX0002154
HIT000508130 (
ENST00000410112
)
(Exocyst complex component 6 isoform b.)
genome : 72,723,583 - 73,053,134 (329,552)
query : 1 - 1,372 (1,372/1,372)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 10, cyto_pero 10, cyto_plas 10,
cyto_golg 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002154)
HIX0002154
HIT000589203 (
ENST00000485398
)
(Exocyst complex component 6B.)
genome : 72,727,057 - 72,742,883 (15,827)
query : 1 - 616 (616/616)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002154)
HIX0030204
HIT000087508
(
BC010534
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,920,984 - 72,922,473 (1,490)
query : 1 - 1,490 (1,490/1,507)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030204)
HIX0118936
HIT000474603 (
ENST00000391076
)
(Non-protein coding transcript.)
genome : 72,987,663 - 72,987,731 (69)
query : 1 - 69 (69/69)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118936)
HIX0002155
HIT000494336
(
AK299712
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,240 - 73,115,233 (994)
query : 1 - 994 (994/994)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR016040 : NAD(P)-binding domain
GO :
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, plas 6, extr 2, cyto 2, pero 2, golg 2,
cyto_pero 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000104551 (
ENST00000234454
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,489 - 73,119,287 (4,799)
query : 1 - 1,480 (1,480/1,480)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 3.5, cyto 3, extr_plas 3, plas 1.5,
cyto_golg 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000601957 (
ENST00000498749
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,511 - 73,118,882 (4,372)
query : 1 - 947 (947/947)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000199985 (
NM_003124
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,512 - 73,119,289 (4,778)
query : 1 - 1,459 (1,459/1,466)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.995
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 3.5, cyto 3, extr_plas 3, plas 1.5,
cyto_golg 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000330722
(
AK222942
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,524 - 73,119,286 (4,763)
query : 1 - 1,444 (1,444/1,460)
3 exons
identity = 0.999
5'(0.997;1.000;0.999)3'
coverage = 0.999
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR006393 : Sepiapterin reductase
IPR016040 : NAD(P)-binding domain
GO :
0004757 : Molecular Function : sepiapterin reductase activity
0006729 : Biological Process : tetrahydrobiopterin biosynthetic process
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr_plas 3, plas 2.5, extr 2.5, nucl 2,
cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000196364
(
M76231
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,540 - 73,118,691 (4,152)
query : 1 - 833 (833/833)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR006393 : Sepiapterin reductase
IPR016040 : NAD(P)-binding domain
GO :
0004757 : Molecular Function : sepiapterin reductase activity
0006729 : Biological Process : tetrahydrobiopterin biosynthetic process
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 3.5, cyto 3, extr_plas 3, plas 1.5,
cyto_golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000037938
(
BC017310
)
Representative transcript
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,548 - 73,119,286 (4,739)
query : 1 - 1,420 (1,420/1,438)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR006393 : Sepiapterin reductase
IPR016040 : NAD(P)-binding domain
GO :
0004757 : Molecular Function : sepiapterin reductase activity
0006729 : Biological Process : tetrahydrobiopterin biosynthetic process
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 3.5, cyto 3, extr_plas 3, plas 1.5,
cyto_golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154720
Danio
sp. (Zebrafish) : BC076547
Gallus
sp. (Chicken) : CR352928
Bos
sp. (Cow) : DQ978331
Oryzias
sp. (Medaka) : ENSORLT00000014059
Pongo
sp. (Orangutan) : ENSPPYT00000014279
Rattus
sp. (Rat) : ENSRNOT00000031768
Tetraodon
sp. (Tetraodon) : GSTENT00037979001
Danio
sp. (Zebrafish) : NM_001128790
Takifugu
sp. (Fugu) : SINFRUT00000148435
Macaca
sp. (Macaque) : XM_001103332
Monodelphis
sp. (Opossum) : XM_001362220
Monodelphis
sp. (Opossum) : XM_001362311
Equus
sp. (Horse) : XM_001917166
Pan
sp. (Chimpanzee) : XM_525784
Canis
sp. (Dog) : XM_540234
HIX0002155
HIT000424653
(
AK291856
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,114,552 - 73,118,797 (4,246)
query : 1 - 927 (927/927)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
InterPro :
IPR002198 : Short-chain dehydrogenase/reductase SDR
IPR002347 : Glucose/ribitol dehydrogenase
IPR006393 : Sepiapterin reductase
IPR016040 : NAD(P)-binding domain
GO :
0004757 : Molecular Function : sepiapterin reductase activity
0006729 : Biological Process : tetrahydrobiopterin biosynthetic process
0008152 : Biological Process : metabolic process
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 3.5, cyto 3, extr_plas 3, plas 1.5,
cyto_golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0002155
HIT000216398
(
S71376
)
(Sepiapterin reductase; SPR; EC=1.1.1.153;)
genome : 73,118,500 - 73,118,641 (142)
query : 1 - 142 (142/142)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.153
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002155)
HIX0023998
HIT000477530 (
ENST00000394111
)
(Homeobox protein EMX1; Empty spiracles homolog 1; Empty spiracles-like protein 1;)
genome : 73,143,176 - 73,161,457 (18,282)
query : 1 - 1,741 (1,741/1,741)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000094760
(
BC037242
)
(Homeobox protein EMX1; Empty spiracles homolog 1; Empty spiracles-like protein 1;)
genome : 73,143,429 - 73,161,477 (18,049)
query : 1 - 1,512 (1,512/1,553)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000047 : Helix-turn-helix motif
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0000976 : Molecular Function : transcription regulatory region sequence-specific DNA binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000107237 (
ENST00000258106
)
(Homeobox protein EMX1; Empty spiracles homolog 1; Empty spiracles-like protein 1;)
genome : 73,144,604 - 73,162,020 (17,417)
query : 1 - 2,188 (2,188/2,188)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000316987 (
NM_004097
)
(Homeobox protein EMX1; Empty spiracles homolog 1; Empty spiracles-like protein 1;)
genome : 73,144,604 - 73,162,020 (17,417)
query : 1 - 2,188 (2,188/2,188)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000052973
(
BC045762
)
Representative transcript
(Homeobox protein EMX1; Empty spiracles homolog 1; Empty spiracles-like protein 1;)
genome : 73,144,604 - 73,161,477 (16,874)
query : 1 - 1,645 (1,645/1,660)
3 exons
identity = 0.999
5'(0.999;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB221645
Danio
sp. (Zebrafish) : BC134029
Gallus
sp. (Chicken) : ENSGALT00000025935
Tetraodon
sp. (Tetraodon) : GSTENT00019961001
Takifugu
sp. (Fugu) : SINFRUT00000180239
Macaca
sp. (Macaque) : XM_001103417
Canis
sp. (Dog) : XM_540233
Bos
sp. (Cow) : XM_586475
HIX0023998
HIT000578049 (
ENST00000473732
)
(Homeobox protein EMX1.)
genome : 73,145,310 - 73,152,670 (7,361)
query : 1 - 480 (480/480)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000322949
(
X68879
)
(Homeobox protein EMX1.)
genome : 73,145,393 - 73,161,083 (15,691)
query : 1 - 462 (462/462)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000047 : Helix-turn-helix motif
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0000976 : Molecular Function : transcription regulatory region sequence-specific DNA binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000594561 (
ENST00000491023
)
(Homeobox protein EMX1.)
genome : 73,150,543 - 73,161,493 (10,951)
query : 1 - 1,071 (1,071/1,071)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0023998
HIT000569409 (
ENST00000464675
)
(Conserved hypothetical protein.)
genome : 73,151,117 - 73,161,368 (10,252)
query : 1 - 959 (959/959)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023998)
HIX0030168
HIT000089657
(
BC018640
)
(Hypothetical short protein.)
genome : 73,169,165 - 73,170,049 (885)
query : 1 - 885 (885/944)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 9.5, cyto 7.5,
extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000008444
(
AK025170
)
(Conserved hypothetical protein.)
genome : 73,169,165 - 73,171,263 (2,099)
query : 2 - 2,100 (2,099/2,116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.83333, cyto 8.5, nucl 7,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000019060
(
AK094205
)
(Conserved hypothetical protein.)
genome : 73,169,184 - 73,171,950 (2,767)
query : 1 - 2,767 (2,767/2,767)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.83333, cyto 8.5, nucl 7,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000434727
(
AK315861
)
(Conserved hypothetical protein.)
genome : 73,171,582 - 73,198,796 (27,215)
query : 1 - 831 (831/831)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11, cyto_nucl 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000425982
(
AK307116
)
(Sideroflexin-5.)
genome : 73,171,732 - 73,208,246 (36,515)
query : 1 - 808 (808/808)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11, cyto_nucl 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000598578 (
ENST00000495208
)
(Conserved hypothetical protein.)
genome : 73,171,732 - 73,208,246 (36,515)
query : 1 - 808 (808/808)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11, cyto_nucl 11, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000427729
(
AK308863
)
Representative transcript
(Sideroflexin-5.)
genome : 73,171,869 - 73,215,477 (43,609)
query : 6 - 900 (895/900)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000586231 (
ENST00000482289
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,171,869 - 73,215,477 (43,609)
query : 1 - 895 (895/895)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, E.R. 3, extr 2, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000427957
(
AK309091
)
(Sideroflexin-5.)
genome : 73,171,869 - 73,208,363 (36,495)
query : 1 - 906 (906/906)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030168
HIT000593633 (
ENST00000490056
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,171,869 - 73,208,363 (36,495)
query : 1 - 906 (906/906)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0030345
HIT000096729
(
BC041462
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,181,268 - 73,193,366 (12,099)
query : 1 - 2,279 (2,279/2,316)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, cyto 11.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030345)
HIX0030168
HIT000586467 (
ENST00000482542
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,188,331 - 73,222,093 (33,763)
query : 1 - 546 (546/546)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, mito 6, plas 5, mito_pero 5, pero 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030168)
HIX0214531
HIT000028366
(
AL833454
)
Representative transcript
(Sideroflexin-5.)
genome : 73,223,655 - 73,298,838 (75,184)
query : 2 - 2,963 (2,962/2,977)
9 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000548119 (
ENST00000450185
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,223,655 - 73,298,838 (75,184)
query : 1 - 2,961 (2,961/2,975)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.83333, nucl 6.5, cyto 6,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000540516 (
ENST00000442582
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,226,080 - 73,298,854 (72,775)
query : 1 - 489 (489/489)
8 exons
identity = 0.992
3'(1.000;1.000;0.920;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 10.5, cyto 10.5, extr 6, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000591210 (
ENST00000487508
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,226,086 - 73,286,305 (60,220)
query : 1 - 507 (507/507)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000600437 (
ENST00000497144
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,228,656 - 73,298,459 (69,804)
query : 1 - 598 (598/598)
7 exons
identity = 0.984
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.967)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000007467
(
AK024193
)
(Conserved hypothetical protein.)
genome : 73,246,576 - 73,298,418 (51,843)
query : 1 - 1,808 (1,808/1,808)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 10.3333, cyto_nucl 6.5, extr 6,
nucl 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000583363 (
ENST00000479293
)
(Conserved hypothetical protein.)
genome : 73,246,576 - 73,298,418 (51,843)
query : 1 - 1,808 (1,808/1,808)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 10.3333, cyto_nucl 6.5, extr 6,
nucl 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000579863 (
ENST00000475630
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,249,664 - 73,297,696 (48,033)
query : 1 - 422 (422/422)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 8.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000576644 (
ENST00000472259
)
(Conserved hypothetical protein.)
genome : 73,276,215 - 73,298,395 (22,181)
query : 1 - 1,690 (1,690/1,690)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 10.3333, cyto_nucl 6.5, extr 6,
nucl 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214999
HIT000557600
(
EU219624
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,279,628 - 73,281,367 (1,740)
query : 1 - 1,740 (1,740/1,740)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 8, cyto 7, mito 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214999)
HIX0214531
HIT000587986 (
ENST00000484123
)
(Tricarboxylate/iron carrier family protein.)
genome : 73,280,458 - 73,298,791 (18,334)
query : 1 - 351 (351/351)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, extr 10, nucl 8, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214531
HIT000592465 (
ENST00000488839
)
(Hypothetical short protein.)
genome : 73,285,206 - 73,286,287 (1,082)
query : 1 - 671 (671/671)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214531)
HIX0214495
HIT000024741
(
AL117579
)
(Rab11 family-interacting protein 5.)
genome : 73,300,510 - 73,307,147 (6,638)
query : 1 - 2,902 (2,902/2,935)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019018 : Rab-binding domain FIP-RBD
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000008001
(
AK024727
)
(Conserved hypothetical protein.)
genome : 73,300,510 - 73,302,303 (1,794)
query : 1 - 1,794 (1,794/1,827)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 5.5, extr 5, nucl 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000205490 (
NM_015470
)
(C2 domain containing protein.)
genome : 73,300,510 - 73,340,146 (39,637)
query : 1 - 4,342 (4,342/4,362)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, mito 7, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000051301
(
BC035013
)
(Rab11 family-interacting protein 5; Rab11-FIP5; Gamma-SNAP-associated factor 1; Gaf-1; Phosphoprotein pp75; Rab11-interacting protein Rip11;)
genome : 73,300,510 - 73,340,068 (39,559)
query : 5 - 4,265 (4,261/4,279)
5 exons
identity = 0.998
3'(0.998;1.000;0.999;0.993;0.998)5'
coverage = 0.999
InterPro :
IPR000008 : C2 domain
IPR019018 : Rab-binding domain FIP-RBD
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, mito 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000336131
(
BC099902
)
(Rab11 family-interacting protein 5.)
genome : 73,300,510 - 73,340,041 (39,532)
query : 1 - 4,236 (4,236/4,250)
5 exons
identity = 0.998
3'(0.997;1.000;0.999;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR019018 : Rab-binding domain FIP-RBD
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, mito 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000107232 (
ENST00000258098
)
(C2 domain containing protein.)
genome : 73,300,510 - 73,340,146 (39,637)
query : 1 - 4,342 (4,342/4,342)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, mito 7, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000590514 (
ENST00000486777
)
(Rab-binding domain FIP-RBD containing protein.)
genome : 73,300,510 - 73,307,339 (6,830)
query : 1 - 3,094 (3,094/3,094)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000000574
(
AB020664
)
Representative transcript
(Rab11 family-interacting protein 5; Rab11-FIP5; Gamma-SNAP-associated factor 1; Gaf-1; Phosphoprotein pp75; Rab11-interacting protein Rip11;)
genome : 73,300,511 - 73,340,146 (39,636)
query : 1 - 4,341 (4,341/4,341)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, mito 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000077807
(
AF334812
)
(Rab11 family-interacting protein 5; Rab11-FIP5; Gamma-SNAP-associated factor 1; Gaf-1; Phosphoprotein pp75; Rab11-interacting protein Rip11;)
genome : 73,300,511 - 73,340,145 (39,635)
query : 1 - 4,340 (4,340/4,340)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR019018 : Rab-binding domain FIP-RBD
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, mito 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000007097
(
AK023823
)
(Rab11 family-interacting protein 5; Rab11-FIP5; Rab11-interacting protein Rip11;)
genome : 73,300,512 - 73,316,783 (16,272)
query : 1 - 4,005 (4,005/4,006)
4 exons
identity = 0.998
3'(0.998;0.995;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR019018 : Rab-binding domain FIP-RBD
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000596958 (
ENST00000493523
)
(Rab-binding domain FIP-RBD containing protein.)
genome : 73,300,512 - 73,316,783 (16,272)
query : 1 - 4,008 (4,008/4,008)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000586479 (
ENST00000482554
)
(Rab-binding domain FIP-RBD containing protein.)
genome : 73,300,512 - 73,311,524 (11,013)
query : 1 - 2,810 (2,810/2,810)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 9.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000449189
(
DQ582658
)
(Non-protein coding transcript.)
genome : 73,301,040 - 73,301,070 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000071841
(
AF153085
)
(Rab11 family-interacting protein 5.)
genome : 73,301,283 - 73,339,594 (38,312)
query : 1 - 3,017 (3,017/3,018)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR019018 : Rab-binding domain FIP-RBD
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000441625
(
DQ575094
)
(Non-protein coding transcript.)
genome : 73,301,650 - 73,301,679 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0214495
HIT000441983
(
DQ575452
)
(Non-protein coding transcript.)
genome : 73,302,092 - 73,302,122 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0200406
HIT000446781
(
DQ580250
)
Representative transcript
(Non-protein coding transcript.)
genome : 73,307,799 - 73,307,828 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200406)
HIX0214495
HIT000583272 (
ENST00000479196
)
(Conserved hypothetical protein.)
genome : 73,308,332 - 73,315,456 (7,125)
query : 1 - 605 (605/605)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0118317
HIT000453934
(
DQ587403
)
Representative transcript
(Non-protein coding transcript.)
genome : 73,313,688 - 73,313,717 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118317)
HIX0214495
HIT000580168 (
ENST00000475951
)
(Conserved hypothetical protein.)
genome : 73,316,070 - 73,383,849 (67,780)
query : 1 - 458 (458/458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214495)
HIX0002159
HIT000013011
(
AK056397
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,340,292 - 73,343,035 (2,744)
query : 1 - 2,745 (2,745/2,745)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.5, cyto 6, nucl 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002159)
HIX0119000
HIT000481654 (
ENST00000398468
)
(Homeobox protein notochord.)
genome : 73,429,386 - 73,439,641 (10,256)
query : 1 - 2,749 (2,749/2,749)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto_mito 8.16667, cyto 8,
mito 6.5, cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119000)
HIX0119000
HIT000490560
(
AK295936
)
(Homeobox protein notochord.)
genome : 73,429,386 - 73,438,340 (8,955)
query : 1 - 1,448 (1,448/1,448)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto_mito 8.16667, cyto 8,
mito 6.5, cyto_pero 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119000)
HIX0119000
HIT000559941 (
NM_001134462
)
(Homeobox protein notochord.)
genome : 73,429,386 - 73,438,340 (8,955)
query : 1 - 1,448 (1,448/1,448)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto_mito 8.16667, cyto 8,
mito 6.5, cyto_pero 5.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119000)
HIX0119000
HIT000500023
(
AK316410
)
Representative transcript
(Homeobox protein notochord.)
genome : 73,429,430 - 73,438,504 (9,075)
query : 1 - 1,568 (1,568/1,568)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto_mito 8.16667, cyto 8,
mito 6.5, cyto_pero 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119000)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK135886
Bos
sp. (Cow) : ENSBTAT00000033164
Pongo
sp. (Orangutan) : ENSPPYT00000014274
Gallus
sp. (Chicken) : U20615
Rattus
sp. (Rat) : XM_001073866
Macaca
sp. (Macaque) : XM_001103636
Pan
sp. (Chimpanzee) : XM_525785
Canis
sp. (Dog) : XM_850080
HIX0029983
HIT000396409 (
ENST00000389501
)
(SET and MYND domain-containing protein 5; Protein NN8-4AG; Retinoic acid-induced protein 15;)
genome : 73,441,350 - 73,454,365 (13,016)
query : 1 - 2,593 (2,593/2,593)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000511425 (
ENST00000413491
)
(SET and MYND domain-containing protein 5.)
genome : 73,441,350 - 73,448,341 (6,992)
query : 1 - 660 (660/660)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4.33333, cyto 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000317032 (
NM_006062
)
(SET and MYND domain-containing protein 5; Protein NN8-4AG; Retinoic acid-induced protein 15;)
genome : 73,441,366 - 73,454,355 (12,990)
query : 1 - 2,567 (2,567/2,585)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000107234 (
ENST00000258100
)
(SET and MYND domain-containing protein 5.)
genome : 73,441,366 - 73,450,234 (8,869)
query : 1 - 786 (786/786)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000496433
(
AK301809
)
(SET and MYND domain-containing protein 5; Protein NN8-4AG; Retinoic acid-induced protein 15;)
genome : 73,441,373 - 73,453,283 (11,911)
query : 1 - 1,488 (1,488/1,488)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001214 : SET domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000495403
(
AK300779
)
(SET and MYND domain-containing protein 5.)
genome : 73,441,373 - 73,453,274 (11,902)
query : 1 - 1,460 (1,460/1,460)
13 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001214 : SET domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000265032
(
BC073806
)
Representative transcript
(SET and MYND domain-containing protein 5; Protein NN8-4AG; Retinoic acid-induced protein 15;)
genome : 73,441,390 - 73,454,355 (12,966)
query : 1 - 2,543 (2,543/2,561)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001214 : SET domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171442
Mus
sp. (Mouse) : AK162926
Danio
sp. (Zebrafish) : BC081479
Bos
sp. (Cow) : BC149125
Gallus
sp. (Chicken) : CR406634
Tetraodon
sp. (Tetraodon) : CR658653
Equus
sp. (Horse) : ENSECAT00000024171
Oryzias
sp. (Medaka) : ENSORLT00000000882
Pongo
sp. (Orangutan) : ENSPPYT00000014273
Takifugu
sp. (Fugu) : SINFRUT00000142225
Rattus
sp. (Rat) : XM_232134
Pan
sp. (Chimpanzee) : XM_515547
Canis
sp. (Dog) : XM_533007
HIX0029983
HIT000220151
(
U50383
)
(SET and MYND domain-containing protein 5.)
genome : 73,441,415 - 73,454,349 (12,935)
query : 3 - 2,513 (2,511/2,520)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981;1.000;1.000;1.000;0.999)3'
coverage = 0.996
InterPro :
IPR001214 : SET domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 9.5, cyto_pero 7.5, mito_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000541834 (
ENST00000443900
)
(SET and MYND domain-containing protein 5; Protein NN8-4AG; Retinoic acid-induced protein 15;)
genome : 73,441,695 - 73,448,322 (6,628)
query : 1 - 584 (584/584)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6, cyto 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000578932 (
ENST00000474652
)
(SET and MYND domain-containing protein 5.)
genome : 73,441,718 - 73,449,050 (7,333)
query : 1 - 753 (753/753)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000594738 (
ENST00000491204
)
(SET and MYND domain-containing protein 5.)
genome : 73,447,045 - 73,447,849 (805)
query : 1 - 335 (335/335)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, cyto 6, nucl 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000581201 (
ENST00000477038
)
(SET and MYND domain-containing protein 5.)
genome : 73,448,304 - 73,450,295 (1,992)
query : 1 - 359 (359/359)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0029983
HIT000590269 (
ENST00000486518
)
(SET and MYND domain-containing protein 5.)
genome : 73,452,350 - 73,453,009 (660)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029983)
HIX0002160
HIT000252649
(
AY358605
)
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,455,135 - 73,460,347 (5,213)
query : 1 - 1,073 (1,073/1,098)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
HIX0002160
HIT000032197
(
BC005069
)
Representative transcript
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,455,135 - 73,460,356 (5,222)
query : 1 - 1,082 (1,082/1,105)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK006658
Bos
sp. (Cow) : BC150018
Gallus
sp. (Chicken) : BX929899
Pongo
sp. (Orangutan) : ENSPPYT00000014272
Macaca
sp. (Macaque) : XM_001104183
Monodelphis
sp. (Opossum) : XM_001381913
Equus
sp. (Horse) : XM_001916917
Pan
sp. (Chimpanzee) : XM_525786
Canis
sp. (Dog) : XM_850073
HIX0002160
HIT000210550 (
NM_032319
)
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,455,135 - 73,460,356 (5,222)
query : 1 - 1,082 (1,082/1,105)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 6, mito 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
HIX0002160
HIT000107228 (
ENST00000258083
)
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,455,134 - 73,460,356 (5,223)
query : 1 - 1,083 (1,083/1,083)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 6, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
HIX0002160
HIT000584129 (
ENST00000480093
)
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,455,459 - 73,460,366 (4,908)
query : 1 - 600 (600/600)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 6, mito 3, cysk_plas 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
HIX0002160
HIT000430943
(
AK312077
)
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,455,582 - 73,460,364 (4,783)
query : 1 - 643 (643/643)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
HIX0002160
HIT000574868 (
ENST00000470391
)
(Protease-associated domain-containing protein 1; Protease-associated domain-containing protein of 21 kDa; hPAP21; Precursor;)
genome : 73,456,927 - 73,460,357 (3,431)
query : 1 - 551 (551/551)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002160)
HIX0002161
HIT000576328 (
ENST00000471927
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,460,548 - 73,470,236 (9,689)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000574343 (
ENST00000469844
)
(T-complex protein 1 subunit eta isoform d.)
genome : 73,460,557 - 73,471,758 (11,202)
query : 1 - 612 (612/612)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 12, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000577538 (
ENST00000473197
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,460,573 - 73,467,676 (7,104)
query : 1 - 595 (595/595)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, nucl 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000595744 (
ENST00000492253
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,460,587 - 73,470,210 (9,624)
query : 1 - 531 (531/531)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 17, cyto_plas 11.6667, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000203030 (
NM_006429
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,364 - 73,480,150 (18,787)
query : 1 - 1,936 (1,936/1,948)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000316638 (
NM_001009570
)
(T-complex protein 1 subunit eta isoform b.)
genome : 73,461,364 - 73,480,150 (18,787)
query : 1 - 1,324 (1,324/1,336)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, mito 5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000654315 (
NM_001166284
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,364 - 73,480,150 (18,787)
query : 1 - 1,675 (1,675/1,687)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000654316 (
NM_001166285
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,364 - 73,480,150 (18,787)
query : 1 - 2,032 (2,032/2,044)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000657909 (
NR_029402
)
(T-complex protein 1 subunit eta isoform b.)
genome : 73,461,364 - 73,480,150 (18,787)
query : 1 - 1,883 (1,883/1,895)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000657910 (
NR_029403
)
(T-complex protein 1 subunit eta isoform c.)
genome : 73,461,364 - 73,480,150 (18,787)
query : 1 - 1,787 (1,787/1,799)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_pero 14, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000638964 (
ENST00000539919
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,364 - 73,480,149 (18,786)
query : 1 - 2,031 (2,031/2,031)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000639513 (
ENST00000540468
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,364 - 73,480,149 (18,786)
query : 1 - 1,674 (1,674/1,674)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000107230 (
ENST00000258091
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,366 - 73,480,132 (18,767)
query : 1 - 1,916 (1,916/1,916)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000566183 (
ENST00000461290
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,397 - 73,471,639 (10,243)
query : 1 - 1,018 (1,018/1,018)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000266185
(
BC088351
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,409 - 73,480,133 (18,725)
query : 1 - 1,874 (1,874/1,888)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000424758
(
AK291961
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,418 - 73,480,063 (18,646)
query : 1 - 1,795 (1,795/1,795)
12 exons
identity = 0.998
5'(0.989;1.000;1.000;1.000;0.981;1.000;1.000;
1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000569147 (
ENST00000464397
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,435 - 73,467,275 (5,841)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 10, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000481610 (
ENST00000398422
)
(T-complex protein 1 subunit eta isoform b.)
genome : 73,461,436 - 73,480,132 (18,697)
query : 1 - 1,234 (1,234/1,234)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000488221
(
AK293597
)
(T-complex protein 1 subunit eta isoform b.)
genome : 73,461,436 - 73,480,132 (18,697)
query : 1 - 1,234 (1,234/1,234)
7 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;0.995;0.997)3'
coverage = 1.000
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000492470
(
AK297846
)
Representative transcript
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,436 - 73,480,132 (18,697)
query : 1 - 1,942 (1,942/1,942)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146902
Bos
sp. (Cow) : BC111332
Pongo
sp. (Orangutan) : CR860934
Gallus
sp. (Chicken) : ENSGALT00000025922
Oryzias
sp. (Medaka) : ENSORLT00000007326
Rattus
sp. (Rat) : XM_001073942
Macaca
sp. (Macaque) : XM_001104880
Monodelphis
sp. (Opossum) : XM_001381914
Equus
sp. (Horse) : XM_001488366
Canis
sp. (Dog) : XM_861494
Pan
sp. (Chimpanzee) : XR_024095
HIX0002161
HIT000492777
(
AK298153
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,436 - 73,480,132 (18,697)
query : 1 - 1,585 (1,585/1,585)
10 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.997)3'
coverage = 1.000
InterPro :
IPR001844 : Chaperonin Cpn60
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0005737 : Cellular Component : cytoplasm
0006457 : Biological Process : protein folding
0042026 : Biological Process : protein refolding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000496702
(
AK302078
)
(T-complex protein 1 subunit eta isoform c.)
genome : 73,461,437 - 73,480,132 (18,696)
query : 2 - 1,697 (1,696/1,697)
11 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;0.995;0.997)3'
coverage = 0.999
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_pero 14, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000482149 (
ENST00000399032
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,436 - 73,471,157 (9,722)
query : 1 - 593 (593/593)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_plas 10.5, mito 9, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000636176 (
ENST00000537131
)
(T-complex protein 1 subunit eta isoform c.)
genome : 73,461,437 - 73,480,132 (18,696)
query : 1 - 1,696 (1,696/1,696)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_pero 14, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000507948 (
ENST00000409924
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,437 - 73,474,917 (13,481)
query : 1 - 567 (567/567)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000584507 (
ENST00000480489
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,437 - 73,470,321 (8,885)
query : 1 - 527 (527/527)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000062815
(
AF026292
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,451 - 73,480,133 (18,683)
query : 13 - 1,844 (1,832/1,863)
12 exons
identity = 0.999
5'(0.984;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000)3'
coverage = 0.993
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000487799
(
AK293175
)
(T-complex protein 1 subunit eta isoform b.)
genome : 73,461,446 - 73,480,134 (18,689)
query : 1 - 1,785 (1,785/1,785)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.985;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000637842 (
ENST00000538797
)
(T-complex protein 1 subunit eta isoform b.)
genome : 73,461,446 - 73,480,134 (18,689)
query : 1 - 1,785 (1,785/1,785)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000023379
(
AK098549
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,446 - 73,480,132 (18,687)
query : 1 - 1,836 (1,836/1,836)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000038616
(
BC019296
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,451 - 73,480,133 (18,683)
query : 1 - 1,832 (1,832/1,849)
12 exons
identity = 0.999
5'(0.984;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000330258
(
AK222478
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,461,456 - 73,480,114 (18,659)
query : 1 - 1,808 (1,808/1,808)
12 exons
identity = 0.998
5'(0.982;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000578103 (
ENST00000473786
)
(T-complex protein 1 subunit eta isoform c.)
genome : 73,461,464 - 73,476,972 (15,509)
query : 1 - 811 (811/811)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, cyto_nucl 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000586015 (
ENST00000482064
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,466,229 - 73,470,258 (4,030)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.6667, cyto 17, cyto_plas 10.8333, nucl 8,
mito 2, pero 2, cysk 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000267569
(
CR456719
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,466,770 - 73,479,985 (13,216)
query : 6 - 1,628 (1,623/1,632)
11 exons
identity = 0.998
5'(0.994;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000)3'
coverage = 0.994
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000268448
(
CR536511
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,466,770 - 73,479,989 (13,220)
query : 6 - 1,632 (1,627/1,632)
11 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000221838
(
U83843
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,466,801 - 73,478,421 (11,621)
query : 1 - 1,235 (1,235/1,236)
10 exons
identity = 0.990
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.979;
0.980;0.970;0.971)3'
coverage = 0.999
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, mito 10, cyto 6, cysk_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000592482 (
ENST00000488856
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,470,974 - 73,476,189 (5,216)
query : 1 - 612 (612/612)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002161
HIT000023655
(
AK098825
)
(T-complex protein 1 subunit eta; TCP-1-eta; CCT-eta; HIV-1 Nef-interacting protein;)
genome : 73,471,751 - 73,480,132 (8,382)
query : 1 - 1,250 (1,250/1,250)
7 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012720 : T-complex protein 1, eta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002161)
HIX0002162
HIT000307107
(
CR936834
)
(Hypothetical short protein.)
genome : 73,481,820 - 73,482,660 (841)
query : 1 - 841 (841/883)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, extr_plas 10.5, plas 10, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000397999 (
NM_001080410
)
(F-box only protein 41;)
genome : 73,481,810 - 73,496,758 (14,949)
query : 1 - 6,928 (6,928/6,939)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000114073 (
ENST00000295133
)
(F-box only protein 41;)
genome : 73,481,810 - 73,498,043 (16,234)
query : 1 - 7,111 (7,111/7,111)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000621182 (
ENST00000521871
)
(F-box only protein 41;)
genome : 73,481,818 - 73,511,559 (29,742)
query : 1 - 7,336 (7,336/7,336)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000011735
(
AK055121
)
(Conserved hypothetical protein.)
genome : 73,481,818 - 73,485,743 (3,926)
query : 1 - 3,926 (3,926/3,926)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000001655
(
AB075820
)
Representative transcript
(F-box only protein 41.)
genome : 73,482,949 - 73,496,596 (13,648)
query : 1 - 5,627 (5,627/5,627)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 14, cyto_pero 9.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147230
Bos
sp. (Cow) : ENSBTAT00000016959
Canis
sp. (Dog) : ENSCAFT00000014048
Gallus
sp. (Chicken) : ENSGALT00000025921
Oryzias
sp. (Medaka) : ENSORLT00000002797
Oryzias
sp. (Medaka) : ENSORLT00000008000
Rattus
sp. (Rat) : ENSRNOT00000043201
Tetraodon
sp. (Tetraodon) : GSTENT00033489001
Takifugu
sp. (Fugu) : SINFRUT00000175419
Monodelphis
sp. (Opossum) : XM_001374756
Equus
sp. (Horse) : XM_001917153
Danio
sp. (Zebrafish) : XM_691106
Pan
sp. (Chimpanzee) : XR_020415
HIX0002162
HIT000019883
(
AK095028
)
(F-box only protein 41.)
genome : 73,482,956 - 73,487,636 (4,681)
query : 1 - 3,453 (3,453/3,453)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000047376
(
AK127503
)
(F-box only protein 41.)
genome : 73,483,063 - 73,492,454 (9,392)
query : 1 - 4,156 (4,156/4,157)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.1667, cyto 9.5, mito 9,
cyto_pero 8.16667, nucl 7.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
pHIT000099776 ( pHIT000099776 )
(F-box only protein 41.)
genome : 73,484,194 - 73,517,601 (33,408)
query : 1 - 2,076 (2,076/2,076)
13 exons
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
CAGE tag :
T02F045EB242
HIX0002162
pHIT000099780 ( pHIT000099780 )
(F-box only protein 41.)
genome : 73,484,194 - 73,517,601 (33,408)
query : 1 - 2,112 (2,112/2,112)
13 exons
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
CAGE tag :
T02R045F9A6A
HIX0002162
HIT000619866 (
ENST00000520530
)
(F-box only protein 41;)
genome : 73,485,734 - 73,511,438 (25,705)
query : 1 - 3,293 (3,293/3,293)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000340331
(
BC112202
)
(F-box only protein 41.)
genome : 73,486,059 - 73,493,623 (7,565)
query : 1 - 1,587 (1,587/1,587)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.1667, cyto 7.5, mito 7,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000619220 (
ENST00000519873
)
(F-box only protein 41.)
genome : 73,492,611 - 73,493,932 (1,322)
query : 1 - 580 (580/580)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0002162
HIT000619527 (
ENST00000520186
)
(Conserved hypothetical protein.)
genome : 73,498,325 - 73,511,559 (13,235)
query : 1 - 817 (817/817)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
HIX0214923
HIT000044924
(
AK125051
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,511,662 - 73,518,113 (6,452)
query : 1 - 5,127 (5,127/5,127)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214923)
HIX0029943
HIT000322376
(
X60104
)
Representative transcript
(Early growth response protein 4.)
genome : 73,518,065 - 73,520,610 (2,546)
query : 1 - 2,145 (2,145/2,169)
2 exons
identity = 0.995
3'(0.995;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AJ293900
Mus
sp. (Mouse) : AK141637
Danio
sp. (Zebrafish) : BC155326
Equus
sp. (Horse) : ENSECAT00000010958
Oryzias
sp. (Medaka) : ENSORLT00000008004
Pongo
sp. (Orangutan) : ENSPPYT00000014268
Tetraodon
sp. (Tetraodon) : GSTENT00014544001
Rattus
sp. (Rat) : M65008
Macaca
sp. (Macaque) : XM_001104148
Pan
sp. (Chimpanzee) : XM_001142546
Monodelphis
sp. (Opossum) : XM_001374672
Gallus
sp. (Chicken) : XM_420888
Canis
sp. (Dog) : XM_540228
HIX0029943
HIT000198894 (
NM_001965
)
(Early growth response protein 4; EGR-4; AT133;)
genome : 73,518,057 - 73,520,829 (2,773)
query : 1 - 2,373 (2,373/2,379)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0029943
HIT000644075 (
ENST00000545030
)
(Early growth response protein 4; EGR-4; AT133;)
genome : 73,518,058 - 73,520,829 (2,772)
query : 1 - 2,372 (2,372/2,372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0029943
HIT000534401 (
ENST00000436467
)
(Early growth response protein 4; EGR-4; AT133;)
genome : 73,518,062 - 73,520,833 (2,772)
query : 1 - 2,372 (2,372/2,372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0029943
HIT000500284
(
BC136252
)
(Early growth response protein 4.)
genome : 73,518,487 - 73,520,532 (2,046)
query : 1 - 1,643 (1,643/1,643)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0029943
HIT000501835
(
BC143379
)
(Early growth response protein 4.)
genome : 73,518,487 - 73,520,532 (2,046)
query : 1 - 1,643 (1,643/1,643)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0029943
HIT000433020
(
AK314154
)
(Early growth response protein 4; EGR-4; AT133;)
genome : 73,518,585 - 73,520,833 (2,249)
query : 3 - 1,851 (1,849/1,851)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0029943
HIT000093447
(
BC034462
)
(Early growth response protein 4; EGR-4;)
genome : 73,518,920 - 73,520,668 (1,749)
query : 1 - 1,749 (1,749/1,749)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029943)
HIX0204251
HIT000616582 (
ENST00000517179
)
(Non-protein coding transcript.)
genome : 73,525,811 - 73,525,915 (105)
query : 1 - 105 (105/105)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204251)
HIX0162788
HIT000535122 (
ENST00000437188
)
(Ribosomal protein S2 family protein.)
genome : 73,597,147 - 73,598,020 (874)
query : 1 - 874 (874/874)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, cyto 10, cyto_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162788)
HIX0215150
HIT000007065
(
AK023791
)
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,403,113 - 72,725,612 (322,500)
query : 1 - 4,479 (4,479/4,491)
10 exons
identity = 0.998
3'(0.999;0.991;1.000;1.000;0.994;0.993;1.000;
1.000;1.000;0.967)5'
coverage = 1.000
InterPro :
IPR007225 : Exocyst complex subunit Sec15-like
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215150)
HIX0215150
HIT000110891 (
ENST00000272427
)
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,403,113 - 73,053,170 (650,058)
query : 1 - 5,918 (5,918/5,918)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, nucl 14.5, cyto 14.5,
cyto_pero 8.83333, cyto_golg 8.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215150)
HIX0215150
HIT000009748
(
AK026474
)
Representative transcript
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,406,342 - 72,958,328 (551,987)
query : 1 - 2,186 (2,186/2,217)
19 exons
identity = 0.996
3'(0.980;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;0.991;1.000;1.000;1.000;1.000;0.988;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007225 : Exocyst complex subunit Sec15-like
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 9, cyto_pero 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215150)
HIX0215150
HIT000486189 (
NM_015189
)
(Exocyst complex subunit Sec15-like family protein.)
genome : 72,406,444 - 73,053,177 (646,734)
query : 1 - 2,594 (2,594/2,594)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, nucl 14.5, cyto 14.5,
cyto_pero 8.83333, cyto_golg 8.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215150)
HIX0002157
HIT000083772
(
AY044437
)
Representative transcript
(Sideroflexin-5;)
genome : 73,169,166 - 73,298,965 (129,800)
query : 1 - 4,143 (4,143/4,191)
14 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.983)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174580
Mus
sp. (Mouse) : AK082073
Danio
sp. (Zebrafish) : BC098893
Bos
sp. (Cow) : BC118377
Gallus
sp. (Chicken) : BX931777
Tetraodon
sp. (Tetraodon) : CR716592
Oryzias
sp. (Medaka) : ENSORLT00000000856
Pongo
sp. (Orangutan) : ENSPPYT00000014277
Tetraodon
sp. (Tetraodon) : GSTENT00029266001
Takifugu
sp. (Fugu) : SINFRUT00000142229
Pan
sp. (Chimpanzee) : XM_001150310
Monodelphis
sp. (Opossum) : XM_001368957
Equus
sp. (Horse) : XM_001488626
Danio
sp. (Zebrafish) : XM_001920679
Canis
sp. (Dog) : XM_850083
HIX0002157
HIT000098383
(
BC046630
)
(Sideroflexin-5.)
genome : 73,169,165 - 73,286,301 (117,137)
query : 6 - 4,076 (4,071/4,091)
14 exons
identity = 0.999
3'(0.999;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994)5'
coverage = 0.999
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000088061
(
BC013233
)
(Sideroflexin-5.)
genome : 73,169,165 - 73,286,309 (117,145)
query : 2 - 3,579 (3,578/3,593)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, pero 7, plas 5, nucl 4, cyto_golg 4, mito 3.5,
extr_plas 3.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000110893 (
ENST00000272433
)
(Sideroflexin-5;)
genome : 73,169,165 - 73,298,965 (129,801)
query : 1 - 4,140 (4,140/4,140)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000212817 (
NM_144579
)
(Sideroflexin-5;)
genome : 73,169,165 - 73,298,965 (129,801)
query : 1 - 4,140 (4,140/4,140)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000566241 (
ENST00000461352
)
(Sideroflexin-5.)
genome : 73,169,165 - 73,286,309 (117,145)
query : 1 - 3,578 (3,578/3,578)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8, plas 5, cyto 5, cyto_plas 5, mito 4.5,
cyto_nucl 4.5, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000578815 (
ENST00000474528
)
(Sideroflexin-5.)
genome : 73,169,165 - 73,286,301 (117,137)
query : 1 - 4,072 (4,072/4,072)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000422528
(
AK289731
)
(Sideroflexin-5;)
genome : 73,171,659 - 73,298,854 (127,196)
query : 1 - 1,535 (1,535/1,535)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000336706
(
BC101311
)
(Sideroflexin-5;)
genome : 73,171,696 - 73,298,965 (127,270)
query : 1 - 1,609 (1,609/1,609)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.985;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000336707
(
BC101312
)
(Sideroflexin-5;)
genome : 73,171,696 - 73,298,965 (127,270)
query : 1 - 1,609 (1,609/1,609)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000336708
(
BC101313
)
(Sideroflexin-5;)
genome : 73,171,696 - 73,298,965 (127,270)
query : 1 - 1,609 (1,609/1,609)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000489375
(
AK294751
)
(Sideroflexin-5.)
genome : 73,171,947 - 73,286,306 (114,360)
query : 1 - 1,295 (1,295/1,295)
14 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, mito 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000509717 (
ENST00000411783
)
(Sideroflexin-5.)
genome : 73,171,993 - 73,298,802 (126,810)
query : 1 - 915 (915/915)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8.5, cyto_pero 8.5, pero 7,
mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000490261
(
AK295637
)
(Sideroflexin-5.)
genome : 73,172,104 - 73,286,180 (114,077)
query : 1 - 989 (989/989)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 13, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000433636
(
AK314770
)
(Sideroflexin-5.)
genome : 73,172,151 - 73,298,853 (126,703)
query : 1 - 840 (840/840)
12 exons
identity = 0.999
3'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004686 : Tricarboxylate/iron carrier
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 8, extr_plas 8, plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000508085 (
ENST00000410065
)
(Sideroflexin-5;)
genome : 73,172,151 - 73,298,853 (126,703)
query : 1 - 840 (840/840)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 8, extr_plas 8, plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000568077 (
ENST00000463277
)
(Sideroflexin-5.)
genome : 73,195,576 - 73,247,968 (52,393)
query : 1 - 575 (575/575)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, E.R. 8, cysk_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000514513 (
ENST00000416579
)
(Sideroflexin-5.)
genome : 73,200,310 - 73,298,857 (98,548)
query : 1 - 895 (895/895)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 6, extr 6, extr_plas 6, nucl 5, pero 4, mito 3.5,
E.R._mito 3.5, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000569549 (
ENST00000464825
)
(Sideroflexin-5.)
genome : 73,215,421 - 73,271,744 (56,324)
query : 1 - 532 (532/532)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 13, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002157
HIT000588881 (
ENST00000485057
)
(Sideroflexin-5.)
genome : 73,247,215 - 73,302,747 (55,533)
query : 1 - 447 (447/447)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13, extr 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002157)
HIX0002162
pHIT000099776 ( pHIT000099776 )
(F-box only protein 41.)
genome : 73,484,194 - 73,517,601 (33,408)
query : 1 - 2,076 (2,076/2,076)
13 exons
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
CAGE tag :
T02F045EB242
HIX0002162
pHIT000099780 ( pHIT000099780 )
(F-box only protein 41.)
genome : 73,484,194 - 73,517,601 (33,408)
query : 1 - 2,112 (2,112/2,112)
13 exons
InterPro :
IPR001810 : F-box domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002162)
CAGE tag :
T02R045F9A6A
AC093740.2
72000001-72152182 F +
NCBI
AC067950.5
72152183-72253703 F +
NCBI
AC007002.3
72253704-72393834 F +
NCBI
AC006461.2
72393835-72573049 F -
NCBI
AC105051.1
72573050-72718689 F +
NCBI
AC104309.3
72718690-72743221 F +
NCBI
AC016770.10
72743222-72933140 F +
NCBI
AC092630.3
72933141-73117087 F +
NCBI
AC012366.10
73117088-73314856 F +
NCBI
AC010913.9
73314857-73522017 F +
NCBI
AC069404.5
73522018-73557633 F +
NCBI
AC074008.5
73557634-73600000 F +
NCBI