bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0040889
HIT000199156 (
NM_002240
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,996,788 - 39,288,741 (291,954)
query : 1 - 2,527 (2,527/2,537)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000220248
(
U52153
)
Representative transcript
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,996,786 - 39,288,699 (291,914)
query : 110 - 2,598 (2,489/2,598)
4 exons
identity = 0.997
3'(0.999;1.000;0.994)5'
coverage = 0.958
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB073754
Mus
sp. (Mouse) : AK081109
Oryzias
sp. (Medaka) : ENSORLT00000017671
Pongo
sp. (Orangutan) : ENSPPYT00000013417
Tetraodon
sp. (Tetraodon) : GSTENT00014634001
Takifugu
sp. (Fugu) : SINFRUT00000131474
Macaca
sp. (Macaque) : XM_001083031
Pan
sp. (Chimpanzee) : XM_001170389
Monodelphis
sp. (Opossum) : XM_001372233
Equus
sp. (Horse) : XM_001492867
Gallus
sp. (Chicken) : XM_425553
Canis
sp. (Dog) : XM_544881
Bos
sp. (Cow) : XM_598993
Danio
sp. (Zebrafish) : XM_692892
HIX0040889
HIT000483453 (
ENST00000400482
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,996,789 - 39,288,749 (291,961)
query : 1 - 2,534 (2,534/2,534)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000101949
(
D87327
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,996,789 - 39,288,662 (291,874)
query : 1 - 2,447 (2,447/2,447)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000194057
(
L78480
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,996,811 - 39,288,606 (291,796)
query : 143 - 2,507 (2,365/2,507)
4 exons
identity = 0.996
3'(0.999;1.000;0.981)5'
coverage = 0.943
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000218748
(
U24660
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,996,871 - 39,288,371 (291,501)
query : 1 - 2,074 (2,074/2,074)
4 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000336912
(
BC101547
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,997,429 - 39,288,214 (290,786)
query : 1 - 1,359 (1,359/1,359)
4 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000432863
(
AK313997
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,997,461 - 39,285,557 (288,097)
query : 3 - 1,327 (1,325/1,327)
4 exons
identity = 0.998
3'(0.999;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000112973 (
ENST00000288309
)
(G protein-activated inward rectifier potassium channel 2; GIRK-2; BIR1; Inward rectifier K(+) channel Kir3.2; KATP-2; Potassium channel, inwardly rectifying subfamily J member 6;)
genome : 38,997,461 - 39,285,557 (288,097)
query : 1 - 1,325 (1,325/1,325)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0040889
HIT000243923
(
AJ001894
)
(G protein-activated inward rectifier potassium channel 2.)
genome : 38,997,649 - 39,288,438 (290,790)
query : 3 - 1,361 (1,359/1,383)
4 exons
identity = 0.979
3'(0.987;1.000;0.984)5'
coverage = 0.983
InterPro :
IPR003275 : Potassium channel, inwardly rectifying, Kir3.2
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0015467 : Molecular Function : G-protein activated inward rectifier potassium channel activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040889)
HIX0041094
HIT000218421
(
U17640
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,022,446 - 39,022,635 (190)
query : 1 - 190 (190/191)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.995
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041094)
HIX0041093
HIT000218420
(
U17639
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,022,654 - 39,022,912 (259)
query : 2 - 259 (258/259)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041093)
HIX0040967
HIT000243918
(
AJ001875
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,030,639 - 39,031,992 (1,354)
query : 1 - 1,354 (1,354/1,354)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, cyto_mito 11, cyto_nucl 8, cyto 7.5,
extr 7, cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040967)
HIX0040990
HIT000250378
(
AL355730
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,030,867 - 39,033,137 (2,271)
query : 11 - 2,281 (2,271/2,299)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040990)
HIX0040945
HIT000218422
(
U17655
)
(Non-protein coding transcript.)
genome : 39,050,978 - 39,051,174 (197)
query : 2 - 195 (194/195)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.995
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040945)
HIX0040945
HIT000218395
(
U17614
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,050,980 - 39,051,214 (235)
query : 2 - 236 (235/237)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 0.992
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040945)
HIX0041083
HIT000218401
(
U17620
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,056,875 - 39,057,068 (194)
query : 1 - 194 (194/194)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041083)
HIX0040968
HIT000243919
(
AJ001876
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,059,187 - 39,059,882 (696)
query : 2 - 697 (696/697)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8.5, extr_plas 8.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040968)
HIX0041096
HIT000324140
(
X85338
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,082,616 - 39,082,745 (130)
query : 1 - 130 (130/130)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041096)
HIX0041097
HIT000324144
(
X85342
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,088,430 - 39,088,504 (75)
query : 1 - 74 (74/74)
1 exon
identity = 0.960
5'(0.960)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041097)
HIX0175255
HIT000532935 (
ENST00000435001
)
(Hypothetical short protein.)
genome : 39,089,405 - 39,091,872 (2,468)
query : 1 - 357 (357/357)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175255)
HIX0040948
HIT000324143
(
X85341
)
Representative transcript
(Hypothetical short protein.)
genome : 39,100,856 - 39,100,976 (121)
query : 1 - 121 (121/121)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
SOSUI :
This sequence is too short.
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040948)
HIX0040948
HIT000324167
(
X85365
)
(Hypothetical short protein.)
genome : 39,100,878 - 39,100,979 (102)
query : 1 - 102 (102/102)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040948)
HIX0040973
HIT000243931
(
AJ001906
)
Representative transcript
(Hypothetical short protein.)
genome : 39,154,673 - 39,155,303 (631)
query : 2 - 647 (646/647)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 8, cyto_pero 8, cyto_plas 8,
cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040973)
HIX0040971
HIT000243922
(
AJ001893
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,171,576 - 39,174,318 (2,743)
query : 1 - 2,751 (2,751/2,751)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, plas 5, nucl 4, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040971)
HIX0041091
HIT000218418
(
U17637
)
Representative transcript
(Hypothetical short protein.)
genome : 39,187,635 - 39,187,854 (220)
query : 4 - 220 (217/220)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 7.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041091)
HIX0040969
HIT000243920
(
AJ001889
)
Representative transcript
(Hypothetical short protein.)
genome : 39,187,749 - 39,188,289 (541)
query : 1 - 541 (541/548)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040969)
HIX0041092
HIT000218419
(
U17638
)
Representative transcript
(Hypothetical short protein.)
genome : 39,187,939 - 39,188,130 (192)
query : 1 - 191 (191/196)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041092)
HIX0040890
HIT000243932
(
AJ001907
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,282,252 - 39,283,145 (894)
query : 1 - 895 (895/895)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, plas 4, lyso 2, cysk_plas 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040890)
HIX0040890
HIT000243933
(
AJ001908
)
(Non-protein coding transcript.)
genome : 39,282,804 - 39,282,918 (115)
query : 1 - 115 (115/115)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040890)
HIX0040890
HIT000324141
(
X85339
)
(Non-protein coding transcript.)
genome : 39,282,804 - 39,282,918 (115)
query : 1 - 116 (116/116)
1 exon
identity = 0.983
3'(0.983)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040890)
HIX0040834
HIT000482072 (
ENST00000398948
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,323,728 - 39,493,433 (169,706)
query : 1 - 777 (777/777)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0175177
HIT000515072 (
ENST00000417138
)
(Hypothetical protein.)
genome : 39,378,846 - 39,382,920 (4,075)
query : 1 - 424 (424/424)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 10, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175177)
HIX0040834
HIT000202518 (
NM_005867
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,313 - 39,493,454 (67,142)
query : 1 - 1,098 (1,098/1,102)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000125458 (
ENST00000328264
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,313 - 39,493,454 (67,142)
query : 1 - 1,098 (1,098/1,098)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000057891
(
AB000099
)
Representative transcript
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,316 - 39,493,454 (67,139)
query : 1 - 1,095 (1,095/1,095)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013249
Pan
sp. (Chimpanzee) : ENSPTRT00000025935
HIX0040834
HIT000342108
(
DQ179113
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,316 - 39,493,404 (67,089)
query : 1 - 1,045 (1,045/1,045)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000263880
(
BC069729
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,380 - 39,493,416 (67,037)
query : 1 - 993 (993/993)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000335450
(
BC096162
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,704 - 39,493,453 (66,750)
query : 1 - 706 (706/706)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000335451
(
BC096163
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,704 - 39,493,453 (66,750)
query : 1 - 706 (706/706)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000335452
(
BC096164
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,426,704 - 39,493,453 (66,750)
query : 1 - 706 (706/706)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040834
HIT000585983 (
ENST00000482032
)
(Down syndrome critical region protein 4; Down syndrome critical region protein B;)
genome : 39,465,338 - 39,493,425 (28,088)
query : 1 - 799 (799/799)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040834)
HIX0040871
HIT000091750
(
BC029353
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,597 (35,053)
query : 1 - 708 (708/740)
3 exons
identity = 0.999
5'(1.000;0.997;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 4, extr 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000563021 (
NR_026838
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,605 (35,061)
query : 1 - 813 (813/825)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, extr 8, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000563022 (
NR_026839
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,605 (35,061)
query : 1 - 716 (716/728)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 4, extr 3, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000563023 (
NR_026840
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,605 (35,061)
query : 1 - 574 (574/586)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 11, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000563024 (
NR_026841
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,605 (35,061)
query : 1 - 556 (556/568)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000563025 (
NR_026842
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,605 (35,061)
query : 1 - 459 (459/471)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 10.5, cyto 9.5, extr 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000582710 (
ENST00000478613
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,545 - 39,528,605 (35,061)
query : 1 - 716 (716/716)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 4, extr 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000037433
(
BC015981
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,606 (35,040)
query : 5 - 442 (438/470)
3 exons
identity = 0.998
5'(1.000;1.000;0.995)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 10.5, cyto 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000246760
(
AJ297914
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000246870
(
AJ301615
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 437 (437/437)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 10.5, cyto 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000246901
(
AJ305085
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 694 (694/694)
3 exons
identity = 0.999
5'(1.000;0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 4, extr 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000246957
(
AJ306839
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 11, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000030603
Pongo
sp. (Orangutan) : ENSPPYT00000013250
Pan
sp. (Chimpanzee) : XM_001170409
HIX0040871
HIT000246958
(
AJ306840
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 606 (606/606)
4 exons
identity = 0.993
5'(1.000;0.983;0.989;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto_nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000249406
(
AJ783421
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 791 (791/791)
4 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, extr 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000311520 (
ENST00000357704
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 11, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000483448 (
ENST00000400477
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000570225 (
ENST00000465532
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 791 (791/791)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, extr 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000574172 (
ENST00000469658
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 437 (437/437)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 10.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000598711 (
ENST00000495344
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,567 - 39,528,605 (35,039)
query : 1 - 606 (606/606)
4 exons
identity = 0.993
5'(1.000;0.983;0.989;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 13, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000077384
(
AF321193
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,579 - 39,528,611 (35,033)
query : 10 - 537 (528/537)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000264187
(
BC070229
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,586 - 39,528,605 (35,020)
query : 1 - 418 (418/448)
3 exons
identity = 0.998
5'(1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 10.5, cyto 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000243929
(
AJ001904
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,601 - 39,528,605 (35,005)
query : 15 - 516 (502/528)
4 exons
identity = 0.984
5'(0.948;1.000;1.000;0.986)3'
coverage = 0.951
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000387594
(
BC117304
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,613 - 39,528,519 (34,907)
query : 1 - 402 (402/402)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000387620
(
BC117330
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,613 - 39,528,519 (34,907)
query : 1 - 402 (402/402)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000502434
(
BC143995
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,613 - 39,528,519 (34,907)
query : 1 - 420 (420/420)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 11, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000079468
(
AF426256
)
(Down syndrome critical region protein 8; Cancer/testis antigen 25; CT25; Malignant melanoma-associated protein 1; MMA-1; Protein MTAG2;)
genome : 39,493,622 - 39,528,600 (34,979)
query : 1 - 474 (474/495)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9, cyto 8.5, mito_nucl 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000576971 (
ENST00000472602
)
(Hypothetical short protein.)
genome : 39,527,643 - 39,560,110 (32,468)
query : 1 - 766 (766/766)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.33333, cyto 5.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000661486 (
ENST00000547341
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,328 (142,201)
query : 1 - 595 (595/595)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000661716 (
ENST00000547595
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,328 (142,201)
query : 1 - 313 (313/313)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000662666 (
ENST00000548700
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,328 (142,201)
query : 1 - 304 (304/304)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000663632 (
ENST00000549805
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,328 (142,201)
query : 1 - 740 (740/740)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000663736 (
ENST00000549932
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,328 (142,201)
query : 1 - 555 (555/555)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000665040 (
ENST00000551422
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,328 (142,201)
query : 1 - 413 (413/413)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000663064 (
ENST00000549158
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,529,128 - 39,671,259 (142,132)
query : 1 - 626 (626/626)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12, extr 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040972
HIT000243930
(
AJ001905
)
Representative transcript
(Hypothetical short protein.)
genome : 39,549,997 - 39,550,520 (524)
query : 14 - 539 (526/540)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 4.5, mito 4, cyto_nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040972)
HIX0041015
HIT000094310
(
BC036237
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,576,235 - 39,578,174 (1,940)
query : 1 - 1,940 (1,940/1,955)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041015)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : XM_001250824
Canis
sp. (Dog) : XM_545834
HIX0040844
HIT000060575
(
AB066291
)
Representative transcript
(Down syndrome critical region protein 10;)
genome : 39,578,250 - 39,580,738 (2,489)
query : 1 - 861 (861/861)
3 exons
identity = 0.999
5'(1.000;0.993;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto_pero 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040844)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000023588
Pongo
sp. (Orangutan) : ENSPPYT00000013253
Pan
sp. (Chimpanzee) : ENSPTRT00000060572
HIX0040844
HIT000530075 (
ENST00000432141
)
(Down syndrome critical region protein 10;)
genome : 39,578,250 - 39,580,738 (2,489)
query : 1 - 860 (860/860)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040844)
HIX0040844
HIT000563599 (
NR_027695
)
(Down syndrome critical region protein 10;)
genome : 39,578,250 - 39,580,738 (2,489)
query : 1 - 860 (860/860)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto_pero 4, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040844)
HIX0040844
HIT000334830
(
BC093855
)
(Down syndrome critical region protein 10;)
genome : 39,580,229 - 39,580,554 (326)
query : 1 - 326 (326/326)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto_pero 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040844)
HIX0040844
HIT000637460 (
ENST00000538415
)
(Down syndrome critical region protein 10;)
genome : 39,580,229 - 39,580,554 (326)
query : 1 - 326 (326/326)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040844)
HIX0040871
HIT000725311 (
NM_001276437
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,601,837 - 39,673,745 (71,909)
query : 1 - 2,869 (2,869/2,903)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000725312 (
NM_001276438
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,601,837 - 39,673,745 (71,909)
query : 1 - 2,787 (2,787/2,821)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000725313 (
NM_001276439
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,601,837 - 39,673,745 (71,909)
query : 1 - 2,927 (2,927/2,961)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0175302
HIT000542911 (
ENST00000444977
)
(Non-protein coding transcript.)
genome : 39,609,139 - 39,610,123 (985)
query : 1 - 287 (287/287)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175302)
HIX0175198
HIT000521023 (
ENST00000423089
)
(Conserved hypothetical protein.)
genome : 39,610,149 - 39,610,586 (438)
query : 1 - 438 (438/438)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12.5, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175198)
HIX0040871
HIT000199159 (
NM_002243
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,620 - 39,673,745 (45,126)
query : 1 - 2,908 (2,908/2,942)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000725309 (
NM_001276435
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,620 - 39,673,745 (45,126)
query : 1 - 3,047 (3,047/3,081)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000725310 (
NM_001276436
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,620 - 39,673,745 (45,126)
query : 1 - 3,050 (3,050/3,084)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000036215
(
BC013327
)
Representative transcript
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,664 - 39,673,409 (44,746)
query : 5 - 2,532 (2,528/2,561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR003270 : Potassium channel, inwardly rectifying, Kir1.3
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK165346
Rattus
sp. (Rat) : AY028455
Bos
sp. (Cow) : BC142156
Pongo
sp. (Orangutan) : CR859928
Macaca
sp. (Macaque) : ENSMMUT00000023587
Monodelphis
sp. (Opossum) : ENSMODT00000039686
Oryzias
sp. (Medaka) : ENSORLT00000017838
Pan
sp. (Chimpanzee) : ENSPTRT00000025940
Takifugu
sp. (Fugu) : SINFRUT00000180714
Equus
sp. (Horse) : XM_001495174
Danio
sp. (Zebrafish) : XM_001919044
Gallus
sp. (Chicken) : XM_425554
Canis
sp. (Dog) : XM_844575
HIX0040871
HIT000125678 (
ENST00000328656
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,663 - 39,673,743 (45,081)
query : 1 - 2,863 (2,863/2,863)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482054 (
ENST00000398928
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,663 - 39,671,653 (42,991)
query : 1 - 715 (715/715)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R._mito 5.5, mito 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482051 (
ENST00000398925
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,663 - 39,671,367 (42,705)
query : 1 - 532 (532/532)
5 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, nucl 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000541275 (
ENST00000443341
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,664 - 39,671,302 (42,639)
query : 1 - 711 (711/711)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000214558 (
NM_170736
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,726 - 39,673,745 (45,020)
query : 1 - 3,060 (3,060/3,094)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000514976 (
ENST00000417042
)
(Hypothetical short protein.)
genome : 39,628,797 - 39,671,241 (42,445)
query : 1 - 727 (727/727)
5 exons
identity = 0.999
5'(1.000;0.991;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482063 (
ENST00000398938
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,870 - 39,673,412 (44,543)
query : 1 - 2,583 (2,583/2,583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000101947
(
D87291
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,870 - 39,672,318 (43,449)
query : 1 - 1,489 (1,489/1,489)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003270 : Potassium channel, inwardly rectifying, Kir1.3
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, pero 7, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000425609
(
AK292812
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,628,991 - 39,672,466 (43,476)
query : 1 - 1,516 (1,516/1,516)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003270 : Potassium channel, inwardly rectifying, Kir1.3
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000017825
(
AK092958
)
(Conserved hypothetical protein.)
genome : 39,642,673 - 39,644,942 (2,270)
query : 1 - 2,272 (2,272/2,272)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, extr 6, cyto 3.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482058 (
ENST00000398932
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,644,172 - 39,673,412 (29,241)
query : 1 - 2,747 (2,747/2,747)
4 exons
identity = 1.000
5'(1.000;0.991;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000536591 (
ENST00000438657
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,644,217 - 39,671,919 (27,703)
query : 1 - 1,115 (1,115/1,115)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, pero 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000214559 (
NM_170737
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,644,342 - 39,673,745 (29,404)
query : 1 - 2,816 (2,816/2,850)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482056 (
ENST00000398930
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,644,345 - 39,673,743 (29,399)
query : 1 - 2,914 (2,914/2,914)
4 exons
identity = 1.000
5'(1.000;0.991;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482060 (
ENST00000398934
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,644,429 - 39,673,748 (29,320)
query : 1 - 2,732 (2,732/2,732)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0016109
HIT000009953
(
AK026679
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,645,398 - 39,647,442 (2,045)
query : 1 - 2,045 (2,045/2,059)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9.5, cyto_mito 7.5, cyto_nucl 5.83333,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016109)
HIX0016109
HIT000010419
(
AK027145
)
(Conserved hypothetical protein.)
genome : 39,645,398 - 39,647,442 (2,045)
query : 1 - 2,045 (2,045/2,059)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9.5, cyto_mito 7.5, cyto_nucl 5.83333,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016109)
HIX0040871
HIT000014564
(
AK057957
)
(Conserved hypothetical protein.)
genome : 39,662,974 - 39,664,890 (1,917)
query : 1 - 1,915 (1,915/1,915)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 9, mito 9, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000482053 (
ENST00000398927
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,668,479 - 39,671,653 (3,175)
query : 1 - 665 (665/665)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R._mito 5.5, mito 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0203145
HIT000325807
(
Y13895
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,668,652 - 39,668,746 (95)
query : 1 - 95 (95/95)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203145)
HIX0040871
HIT000325617
(
Y10745
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,668,848 - 39,672,775 (3,928)
query : 1 - 1,708 (1,708/1,708)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003270 : Potassium channel, inwardly rectifying, Kir1.3
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000517802 (
ENST00000419868
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,668,848 - 39,671,600 (2,753)
query : 1 - 521 (521/521)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9.5, cyto 8, E.R._mito 7.5, pero 5, plas 3,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0040871
HIT000221205
(
U73191
)
(ATP-sensitive inward rectifier potassium channel 15; Inward rectifier K(+) channel Kir1.3; Inward rectifier K(+) channel Kir4.2; Potassium channel, inwardly rectifying subfamily J member 15;)
genome : 39,668,897 - 39,672,726 (3,830)
query : 4 - 1,613 (1,610/1,613)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.998
InterPro :
IPR003270 : Potassium channel, inwardly rectifying, Kir1.3
IPR013518 : Potassium channel, inwardly rectifying, Kir, cytoplasmic
IPR014756 : Immunoglobulin E-set
IPR016449 : Potassium channel, inwardly rectifying, Kir
GO :
0005242 : Molecular Function : inward rectifier potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040871)
HIX0175072
HIT000512123 (
ENST00000414189
)
(Hypothetical short protein.)
genome : 39,695,557 - 39,705,286 (9,730)
query : 1 - 608 (608/608)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175072)
HIX0041105
HIT000324157
(
X85355
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,696,193 - 39,696,273 (81)
query : 1 - 81 (81/81)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041105)
HIX0175072
HIT000534779 (
ENST00000436845
)
(Hypothetical short protein.)
genome : 39,698,274 - 39,705,343 (7,070)
query : 1 - 423 (423/423)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 10.5, cyto 6.5, cyto_nucl 6,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175072)
HIX0041107
HIT000324160
(
X85358
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,720,530 - 39,756,077 (35,548)
query : 1 - 165 (165/165)
2 exons
identity = 0.994
5'(1.000;0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041107)
HIX0041106
HIT000324158
(
X85356
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,724,719 - 39,724,791 (73)
query : 1 - 73 (73/73)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041106)
HIX0040970
HIT000243921
(
AJ001890
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,727,785 - 39,728,472 (688)
query : 1 - 692 (692/692)
1 exon
identity = 0.961
5'(0.961)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040970)
HIX0041104
HIT000324156
(
X85354
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,734,337 - 39,734,426 (90)
query : 1 - 90 (90/90)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041104)
HIX0027780
HIT000251023
(
AY204741
)
Representative transcript
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,739,183 - 40,033,618 (294,436)
query : 1 - 1,514 (1,514/1,520)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR003118 : Pointed domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0005634 : Cellular Component : nucleus
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK050922
Rattus
sp. (Rat) : BC072519
Bos
sp. (Cow) : BC148054
Equus
sp. (Horse) : ENSECAT00000011300
Oryzias
sp. (Medaka) : ENSORLT00000019955
Pongo
sp. (Orangutan) : ENSPPYT00000013257
Tetraodon
sp. (Tetraodon) : GSTENT00019555001
Gallus
sp. (Chicken) : X77159
Macaca
sp. (Macaque) : XM_001082006
Pan
sp. (Chimpanzee) : XM_001170678
Monodelphis
sp. (Opossum) : XM_001372017
Canis
sp. (Dog) : XM_544885
HIX0027780
HIT000722929 (
NM_001243432
)
(Transcriptional regulator ERG isoform 6.)
genome : 39,739,183 - 40,033,618 (294,436)
query : 1 - 1,514 (1,514/1,520)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000722927 (
NM_001243428
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,951 - 40,032,591 (280,641)
query : 1 - 5,130 (5,130/5,139)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000722928 (
NM_001243429
)
(Transcriptional regulator ERG isoform 5.)
genome : 39,751,951 - 39,956,869 (204,919)
query : 1 - 4,694 (4,694/4,703)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000201197 (
NM_004449
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,949 - 40,033,704 (281,756)
query : 1 - 5,037 (5,037/5,042)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000560315 (
NM_001136154
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,949 - 40,033,704 (281,756)
query : 1 - 5,109 (5,109/5,114)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000318858 (
NM_182918
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,751,949 - 39,870,428 (118,480)
query : 1 - 4,940 (4,940/4,945)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000560316 (
NM_001136155
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,949 - 39,870,428 (118,480)
query : 1 - 4,722 (4,722/4,727)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000482039 (
ENST00000398910
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,949 - 40,033,618 (281,670)
query : 1 - 4,954 (4,954/4,954)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000515067 (
ENST00000417133
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,949 - 40,033,618 (281,670)
query : 1 - 5,023 (5,023/5,023)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000482040 (
ENST00000398911
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,949 - 39,956,869 (204,921)
query : 1 - 4,914 (4,914/4,914)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000482026 (
ENST00000398897
)
(Transcriptional regulator ERG isoform 5.)
genome : 39,751,949 - 39,956,824 (204,876)
query : 1 - 4,651 (4,651/4,651)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000112975 (
ENST00000288319
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,751,949 - 39,870,407 (118,459)
query : 1 - 4,919 (4,919/4,919)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000482034 (
ENST00000398905
)
(Transcriptional regulator ERG isoform 5.)
genome : 39,751,949 - 39,870,366 (118,418)
query : 1 - 4,806 (4,806/4,806)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000482036 (
ENST00000398907
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,751,949 - 39,870,366 (118,418)
query : 1 - 4,809 (4,809/4,809)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000540382 (
ENST00000442448
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,751,952 - 40,033,704 (281,753)
query : 1 - 5,034 (5,034/5,034)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000194791
(
M21536
)
(Hypothetical short protein.)
genome : 39,751,963 - 39,752,272 (310)
query : 1 - 306 (306/313)
1 exon
identity = 0.987
3'(0.987)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 12, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000194790
(
M21535
)
(Transcriptional regulator ERG isoform 5.)
genome : 39,753,492 - 39,956,824 (203,333)
query : 12 - 3,126 (3,115/3,126)
9 exons
identity = 0.993
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000052336
(
BC040168
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,754,866 - 39,870,407 (115,542)
query : 1 - 2,002 (2,002/2,016)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000495019
(
AK300395
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,754,929 - 39,870,418 (115,490)
query : 1 - 1,950 (1,950/1,950)
10 exons
identity = 0.998
3'(0.999;1.000;0.982;1.000;1.000;1.000;1.000;
1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000498142
(
AK303518
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,755,048 - 39,870,400 (115,353)
query : 2 - 1,596 (1,595/1,596)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 0.999
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000550966 (
ENST00000453032
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,755,048 - 39,870,400 (115,353)
query : 1 - 1,595 (1,595/1,595)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000428335
(
AK309469
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,755,213 - 40,032,591 (277,379)
query : 1 - 1,868 (1,868/1,868)
12 exons
identity = 0.998
3'(0.998;0.979;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000482046 (
ENST00000398919
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,755,213 - 40,032,591 (277,379)
query : 1 - 1,868 (1,868/1,868)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000492431
(
AK297807
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,755,277 - 40,033,704 (278,428)
query : 1 - 1,781 (1,781/1,781)
12 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;0.990;1.000)5'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000495901
(
AK301277
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,755,318 - 39,795,369 (40,052)
query : 1 - 1,097 (1,097/1,097)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000324149
(
X85347
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,762,917 - 39,764,366 (1,450)
query : 1 - 174 (174/174)
3 exons
identity = 0.983
3'(1.000;0.965;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 14.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000585577 (
ENST00000481609
)
(Transcriptional regulator ERG isoform 2.)
genome : 39,763,581 - 39,870,380 (106,800)
query : 1 - 970 (970/970)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 6.33333, cyto 5.5, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000499286
(
AK304662
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,763,872 - 39,870,345 (106,474)
query : 1 - 924 (924/924)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000527661 (
ENST00000429727
)
(Transcriptional regulator ERG isoform 1.)
genome : 39,763,872 - 39,870,345 (106,474)
query : 1 - 924 (924/924)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000218411
(
U17630
)
(Conserved hypothetical protein.)
genome : 39,764,318 - 39,775,526 (11,209)
query : 4 - 153 (150/153)
2 exons
identity = 0.960
3'(0.941;0.970)5'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 9, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000557778
(
EU432099
)
(Transcriptional regulator ERG isoform 5.)
genome : 39,767,292 - 39,817,547 (50,256)
query : 59 - 999 (941/1,019)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.942
InterPro :
IPR003118 : Pointed domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0005634 : Cellular Component : nucleus
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000596297 (
ENST00000492833
)
(Transcriptional regulator ERG isoform 2.)
genome : 39,767,292 - 39,817,544 (50,253)
query : 1 - 938 (938/938)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0041084
HIT000218409
(
U17628
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,770,534 - 39,770,716 (183)
query : 1 - 182 (182/184)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 0.989
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041084)
HIX0041100
HIT000324147
(
X85345
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,770,785 - 39,770,814 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041100)
HIX0040947
HIT000218405
(
U17624
)
Representative transcript
(Hypothetical short protein.)
genome : 39,770,913 - 39,771,082 (170)
query : 1 - 169 (169/169)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040947)
HIX0040947
HIT000218407
(
U17626
)
(Hypothetical short protein.)
genome : 39,770,939 - 39,771,080 (142)
query : 1 - 142 (142/142)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040947)
HIX0040946
HIT000218404
(
U17623
)
Representative transcript
(Hypothetical short protein.)
genome : 39,771,598 - 39,771,823 (226)
query : 4 - 224 (221/224)
1 exon
identity = 0.960
5'(0.960)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040946)
HIX0040946
HIT000218408
(
U17627
)
(Non-protein coding transcript.)
genome : 39,771,736 - 39,771,931 (196)
query : 6 - 198 (193/198)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 0.975
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040946)
HIX0080192
HIT000218406
(
U17625
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,771,959 - 39,772,132 (174)
query : 1 - 174 (174/178)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.978
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0080192)
HIX0027780
HIT000251024
(
AY204742
)
(Transcriptional regulator ERG isoform 2.)
genome : 39,771,998 - 40,033,618 (261,621)
query : 1 - 1,450 (1,450/1,460)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR003118 : Pointed domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0005634 : Cellular Component : nucleus
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000573040 (
ENST00000468474
)
(Transcriptional regulator ERG isoform 2.)
genome : 39,771,994 - 40,033,618 (261,625)
query : 1 - 1,454 (1,454/1,454)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0080192
HIT000218410
(
U17629
)
(Non-protein coding transcript.)
genome : 39,772,007 - 39,772,146 (140)
query : 1 - 140 (140/145)
1 exon
identity = 0.951
5'(0.951)3'
coverage = 0.966
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0080192)
HIX0027780
HIT000062346
(
AF015313
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,772,496 - 39,774,559 (2,064)
query : 5 - 157 (153/162)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.944
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000468593
(
DQ831521
)
(Transcriptional regulator ERG; Transforming protein ERG;)
genome : 39,775,465 - 39,947,673 (172,209)
query : 39 - 663 (625/663)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.943
InterPro :
IPR003118 : Pointed domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0005634 : Cellular Component : nucleus
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000577449 (
ENST00000473107
)
(Transcriptional regulator ERG isoform 5.)
genome : 39,775,526 - 39,821,028 (45,503)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 7.33333, cyto 6.5, nucl 6,
cyto_pero 4.66667, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0041109
HIT000324162
(
X85360
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,805,478 - 39,805,720 (243)
query : 1 - 244 (244/244)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041109)
HIX0016111
HIT000010142
(
AK026868
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,810,466 - 39,812,715 (2,250)
query : 1 - 2,250 (2,250/2,250)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, extr 6, cyto_nucl 6, nucl 5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016111)
HIX0027780
HIT000251022
(
AY204740
)
(Hypothetical short protein.)
genome : 39,842,703 - 40,033,618 (190,916)
query : 1 - 1,621 (1,621/1,630)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, extr 1, cyto 1, mito 1, cysk 1, cyto_mito 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0027780
HIT000589293 (
ENST00000485493
)
(Hypothetical short protein.)
genome : 39,842,698 - 40,033,618 (190,921)
query : 1 - 1,626 (1,626/1,626)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, extr 1, cyto 1, mito 1, cysk 1, cyto_mito 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0041085
HIT000218412
(
U17631
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,844,004 - 39,844,186 (183)
query : 4 - 188 (185/188)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 0.984
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041085)
HIX0041086
HIT000218413
(
U17632
)
Representative transcript
(Hypothetical short protein.)
genome : 39,844,279 - 39,844,447 (169)
query : 1 - 169 (169/174)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 13, cyto_nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041086)
HIX0027780
HIT000324154
(
X85352
)
(Non-protein coding transcript.)
genome : 39,845,950 - 39,846,044 (95)
query : 1 - 95 (95/95)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0022229
HIT000007625
(
AK024351
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,857,402 - 39,859,227 (1,826)
query : 1 - 1,826 (1,826/1,826)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022229)
HIX0175286
HIT000540146 (
ENST00000442212
)
(Ribonucleoprotein LSM domain containing protein.)
genome : 39,874,369 - 39,874,545 (177)
query : 1 - 177 (177/177)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.3333, extr 9, nucl 9,
cyto_pero 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175286)
HIX0138674
HIT000468619
(
DQ866755
)
Representative transcript
(Hypothetical short protein.)
genome : 39,913,059 - 39,913,475 (417)
query : 1 - 417 (417/417)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, cyto_mito 5, cyto 4.5, mito 4.5, nucl 1,
E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138674)
HIX0041108
HIT000324161
(
X85359
)
Representative transcript
(Non-protein coding transcript.)
genome : 39,936,053 - 39,936,130 (78)
query : 6 - 83 (78/83)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 0.940
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041108)
HIX0027780
HIT000251025
(
AY204743
)
(Non-protein coding transcript.)
genome : 39,956,799 - 40,033,618 (76,820)
query : 1 - 108 (108/120)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027780)
HIX0040907
HIT000563229 (
NR_027067
)
(Conserved hypothetical protein.)
genome : 40,110,879 - 40,124,181 (13,303)
query : 1 - 643 (643/643)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 9, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000251028
(
AY204746
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,110,950 - 40,145,401 (34,452)
query : 1 - 851 (851/873)
7 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001170741
HIX0040907
HIT000251027
(
AY204745
)
(Conserved hypothetical protein.)
genome : 40,110,950 - 40,140,898 (29,949)
query : 1 - 888 (888/910)
6 exons
identity = 0.997
3'(1.000;0.990;1.000;1.000;1.000;0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000251032
(
AY204750
)
(Hypothetical protein.)
genome : 40,110,950 - 40,114,441 (3,492)
query : 1 - 1,785 (1,785/1,807)
4 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000251026
(
AY204744
)
(Hypothetical protein.)
genome : 40,110,950 - 40,113,977 (3,028)
query : 1 - 676 (676/698)
5 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000527555 (
ENST00000429621
)
(Conserved hypothetical protein.)
genome : 40,110,945 - 40,119,384 (8,440)
query : 1 - 827 (827/827)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.5, nucl 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000509923 (
ENST00000411989
)
(Hypothetical protein.)
genome : 40,110,945 - 40,114,441 (3,497)
query : 1 - 1,790 (1,790/1,790)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.5, nucl 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000546513 (
ENST00000448579
)
(Hypothetical protein.)
genome : 40,110,945 - 40,113,977 (3,033)
query : 1 - 681 (681/681)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.5, nucl 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000563227 (
NR_027065
)
(Conserved hypothetical protein.)
genome : 40,110,948 - 40,145,401 (34,454)
query : 1 - 853 (853/853)
7 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000563228 (
NR_027066
)
(Conserved hypothetical protein.)
genome : 40,110,948 - 40,140,898 (29,951)
query : 1 - 890 (890/890)
6 exons
identity = 0.997
3'(1.000;0.990;1.000;1.000;1.000;0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000251030
(
AY204748
)
(Putative uncharacterized protein encoded by LINC00114;)
genome : 40,121,162 - 40,124,731 (3,570)
query : 1 - 3,598 (3,598/3,621)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto 5, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0040907
HIT000251031
(
AY204749
)
(Putative uncharacterized protein encoded by LINC00114;)
genome : 40,123,002 - 40,125,375 (2,374)
query : 1 - 2,374 (2,374/2,389)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto 5, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040907)
HIX0016112
HIT000723577 (
NM_001256295
)
(Protein C-ets-2;)
genome : 40,177,231 - 40,196,877 (19,647)
query : 1 - 3,934 (3,934/3,954)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000313633 (
ENST00000360214
)
(Protein C-ets-2;)
genome : 40,177,231 - 40,196,879 (19,649)
query : 1 - 3,936 (3,936/3,936)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000021696
(
AK096841
)
(Protein C-ets-2;)
genome : 40,177,231 - 40,195,720 (18,490)
query : 1 - 2,777 (2,777/2,777)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000191236
(
J04102
)
(Protein C-ets-2;)
genome : 40,177,755 - 40,195,380 (17,626)
query : 2 - 2,269 (2,268/2,269)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000201945 (
NM_005239
)
(Protein C-ets-2;)
genome : 40,177,755 - 40,196,877 (19,123)
query : 1 - 3,764 (3,764/3,784)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000314236 (
ENST00000360938
)
(Protein C-ets-2;)
genome : 40,177,755 - 40,196,879 (19,125)
query : 1 - 3,766 (3,766/3,766)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000052766
(
BC042954
)
Representative transcript
(Protein C-ets-2;)
genome : 40,177,853 - 40,195,723 (17,871)
query : 1 - 2,512 (2,512/2,527)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK128933
Danio
sp. (Zebrafish) : BC095899
Bos
sp. (Cow) : BC126692
Pongo
sp. (Orangutan) : CR860643
Equus
sp. (Horse) : ENSECAT00000022937
Gallus
sp. (Chicken) : ENSGALT00000025873
Rattus
sp. (Rat) : XM_001053903
Macaca
sp. (Macaque) : XM_001109324
Pan
sp. (Chimpanzee) : XM_001170871
Monodelphis
sp. (Opossum) : XM_001363017
Canis
sp. (Dog) : XM_854540
HIX0016112
HIT000434429
(
AK315563
)
(Protein C-ets-2;)
genome : 40,177,854 - 40,194,813 (16,960)
query : 1 - 1,603 (1,603/1,603)
10 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000530212 (
ENST00000432278
)
(Protein C-ets-2;)
genome : 40,177,875 - 40,186,905 (9,031)
query : 1 - 1,033 (1,033/1,033)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000037802
(
BC017040
)
(Protein C-ets-2;)
genome : 40,177,883 - 40,195,723 (17,841)
query : 1 - 2,482 (2,482/2,500)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000085312
(
AY216265
)
(Protein C-ets-2;)
genome : 40,180,034 - 40,183,110 (3,077)
query : 1 - 3,077 (3,077/3,099)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000554900 (
ENST00000456966
)
(Protein C-ets-2;)
genome : 40,181,560 - 40,190,570 (9,011)
query : 1 - 972 (972/972)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000099758
(
BT006838
)
(Protein C-ets-2;)
genome : 40,181,959 - 40,194,811 (12,853)
query : 1 - 1,408 (1,408/1,410)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000194135
(
M11922
)
(Protein C-ets-2;)
genome : 40,191,585 - 40,194,813 (3,229)
query : 1 - 441 (441/450)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.980
InterPro :
IPR000418 : Ets domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000003010
(
AK000535
)
(Hypothetical short protein.)
genome : 40,195,987 - 40,196,877 (891)
query : 1 - 891 (891/911)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, cysk 6, extr 5, nucl 2.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0175176
HIT000514776 (
ENST00000416842
)
(Hypothetical short protein.)
genome : 40,218,171 - 40,220,568 (2,398)
query : 1 - 487 (487/487)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 2, mito 2, golg 2, cyto_mito 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175176)
HIX0027814
HIT000046955
(
AK127082
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,249,215 - 40,310,353 (61,139)
query : 1 - 3,822 (3,822/3,822)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 13, cyto 4, extr 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027814)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000012683
Pan
sp. (Chimpanzee) : ENSPTRT00000060570
HIX0027814
HIT000362209 (
ENST00000380931
)
(Conserved hypothetical protein.)
genome : 40,249,215 - 40,310,353 (61,139)
query : 1 - 3,823 (3,823/3,823)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 13, cyto 4, extr 2, cyto_plas 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027814)
HIX0027814
HIT000513758 (
ENST00000415824
)
(Hypothetical protein.)
genome : 40,252,231 - 40,328,392 (76,162)
query : 1 - 407 (407/407)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 8, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027814)
HIX0175253
HIT000532523 (
ENST00000434589
)
(Hypothetical short protein.)
genome : 40,260,696 - 40,275,829 (15,134)
query : 1 - 288 (288/288)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175253)
HIX0213230
HIT000615978 (
ENST00000516575
)
(Non-protein coding transcript.)
genome : 40,266,709 - 40,266,791 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213230)
HIX0175341
HIT000549754 (
ENST00000451820
)
(Conserved hypothetical protein.)
genome : 40,266,841 - 40,267,176 (336)
query : 1 - 336 (336/336)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175341)
HIX0175279
HIT000538313 (
ENST00000440379
)
(Hypothetical short protein.)
genome : 40,285,093 - 40,287,072 (1,980)
query : 1 - 407 (407/407)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 8, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175279)
HIX0041010
HIT000093498
(
BC034606
)
Representative transcript
(Hypothetical protein.)
genome : 40,346,355 - 40,349,700 (3,346)
query : 1 - 1,598 (1,598/1,613)
3 exons
identity = 0.997
3'(0.999;1.000;0.969)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, cyto 4.5, cyto_nucl 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041010)
HIX0041010
HIT000531886 (
ENST00000433952
)
(Hypothetical protein.)
genome : 40,346,355 - 40,349,700 (3,346)
query : 1 - 1,598 (1,598/1,598)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 6, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041010)
HIX0175178
HIT000515269 (
ENST00000417335
)
(Hypothetical short protein.)
genome : 40,360,633 - 40,378,079 (17,447)
query : 1 - 1,412 (1,412/1,412)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6, nucl 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175178)
HIX0175185
HIT000517598 (
ENST00000419664
)
(Hypothetical short protein.)
genome : 40,378,574 - 40,383,255 (4,682)
query : 1 - 509 (509/509)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.16667, cyto 6.5,
cyto_pero 5.16667, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175185)
HIX0040892
HIT000244509
(
AJ011409
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,394,926 - 40,395,761 (836)
query : 84 - 919 (836/919)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.945
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, plas 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040892)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000011875
HIX0175282
HIT000538648 (
ENST00000440714
)
(Hypothetical short protein.)
genome : 40,400,461 - 40,401,053 (593)
query : 1 - 292 (292/292)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 9.5, nucl 8.5, cyto 7.5, mito 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175282)
HIX0016114
HIT000427480
(
AK308614
)
(Proteasome assembly chaperone 1 isoform a.)
genome : 40,449,071 - 40,555,418 (106,348)
query : 1 - 1,478 (1,478/1,478)
6 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;0.993;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, cyto_nucl 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0197131
pHIT000036353 ( pHIT000036353 )
Representative transcript
(Hypothetical protein.)
genome : 40,468,579 - 40,470,970 (2,392)
query : 1 - 324 (324/324)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197131)
CAGE tag :
H08BA26H2307
HIX0213213
HIT000572177 (
ENST00000467573
)
(Ribosomal protein L25/L23 family protein.)
genome : 40,499,494 - 40,499,966 (473)
query : 1 - 473 (473/473)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12, cyto 10.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213213)
HIX0213213
HIT000711547 (
ENST00000599796
)
(Ribosomal protein L25/L23 family protein.)
genome : 40,499,496 - 40,499,966 (471)
query : 1 - 471 (471/471)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12, cyto 10.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213213)
HIX0175272
HIT000535196 (
ENST00000437262
)
(K Homology domain, type 1 containing protein.)
genome : 40,543,056 - 40,544,032 (977)
query : 1 - 977 (977/977)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175272)
HIX0016114
HIT000127313 (
ENST00000331573
)
(Conserved hypothetical protein.)
genome : 40,546,695 - 40,555,777 (9,083)
query : 1 - 2,154 (2,154/2,154)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000031648
(
BC003619
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,357 (7,973)
query : 1 - 1,044 (1,044/1,100)
7 exons
identity = 0.997
3'(0.995;0.993;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000035428
(
BC011755
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,357 (7,973)
query : 1 - 1,044 (1,044/1,100)
7 exons
identity = 0.997
3'(0.995;0.993;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000035965
(
BC012809
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,357 (7,973)
query : 1 - 1,044 (1,044/1,100)
7 exons
identity = 0.997
3'(0.995;0.993;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000034933
(
BC010424
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,349 (7,965)
query : 1 - 1,036 (1,036/1,071)
7 exons
identity = 0.998
3'(0.995;0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000244102
(
AJ006291
)
Representative transcript
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,375 (7,991)
query : 1 - 1,061 (1,061/1,080)
7 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;0.993;1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000200521 (
NM_003720
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,140 (1,140/1,140)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000320049 (
NM_203433
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,077 (1,077/1,077)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000724429 (
NM_001261824
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,125 (1,125/1,125)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto 10.5, cyto_nucl 10, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000727140 (
NR_049728
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,033 (1,033/1,033)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 11, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000585876 (
ENST00000481921
)
(Conserved hypothetical protein.)
genome : 40,547,384 - 40,550,746 (3,363)
query : 1 - 716 (716/716)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, cyto 9, extr 6, E.R._mito 6, mito_pero 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000003929
(
AK001455
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,388 - 40,555,402 (8,015)
query : 1 - 1,086 (1,086/1,088)
7 exons
identity = 0.997
3'(1.000;0.993;1.000;0.984;1.000;1.000;0.996)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000509762 (
ENST00000411828
)
(Conserved hypothetical protein.)
genome : 40,547,514 - 40,555,213 (7,700)
query : 1 - 959 (959/959)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9.5, cyto_nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000362178 (
ENST00000380900
)
(Conserved hypothetical protein.)
genome : 40,547,516 - 40,555,414 (7,899)
query : 1 - 907 (907/907)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000434272
(
AK315406
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,516 - 40,555,342 (7,827)
query : 1 - 898 (898/898)
7 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto_nucl 10, nucl 9.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000079320
(
AF417108
)
(Proteasome assembly chaperone 1 isoform 3.)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 760 (760/760)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000254836
(
AY463963
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 804 (804/804)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000268692
(
CR541821
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 867 (867/867)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000529562 (
ENST00000431628
)
(Conserved hypothetical protein.)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 760 (760/760)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000268722
(
CR541852
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,519 - 40,555,311 (7,793)
query : 1 - 864 (864/864)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.993;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, cyto 9.5, extr 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000487681
(
AB451468
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,519 - 40,555,311 (7,793)
query : 1 - 801 (801/801)
6 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000427537
(
AK308671
)
(Hypothetical short protein.)
genome : 40,555,118 - 40,556,276 (1,159)
query : 1 - 1,143 (1,143/1,143)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016115
HIT000245261
(
AJ238556
)
(Conserved hypothetical protein.)
genome : 40,557,819 - 40,559,624 (1,806)
query : 1 - 1,808 (1,808/1,808)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000245262
(
AJ238573
)
(Hypothetical short protein.)
genome : 40,557,819 - 40,558,612 (794)
query : 1 - 795 (795/795)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_plas 8.83333,
nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000045779
(
AK125906
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,559,172 - 40,636,867 (77,696)
query : 1 - 4,990 (4,990/4,990)
26 exons
identity = 0.999
3'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000544858 (
ENST00000446924
)
(Conserved hypothetical protein.)
genome : 40,559,172 - 40,636,867 (77,696)
query : 1 - 4,990 (4,990/4,990)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0227028
HIT000245260
(
AJ238555
)
Representative transcript
(Hypothetical short protein.)
genome : 40,562,172 - 40,564,246 (2,075)
query : 1 - 2,071 (2,071/2,071)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227028)
HIX0227028
HIT000243963
(
AJ002574
)
(Hypothetical short protein.)
genome : 40,563,209 - 40,563,769 (561)
query : 1 - 576 (576/576)
1 exon
identity = 0.955
3'(0.955)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227028)
HIX0016115
HIT000004651
(
AK002177
)
(Conserved hypothetical protein.)
genome : 40,568,058 - 40,571,409 (3,352)
query : 1 - 2,005 (2,005/2,005)
2 exons
identity = 0.999
3'(0.999;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8.5, cyto_nucl 6.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000244819
(
AJ222636
)
(Conserved hypothetical protein.)
genome : 40,571,002 - 40,572,212 (1,211)
query : 9 - 660 (652/660)
2 exons
identity = 0.994
3'(0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000595084 (
ENST00000491564
)
(Conserved hypothetical protein.)
genome : 40,571,345 - 40,572,422 (1,078)
query : 1 - 522 (522/522)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 2, lyso 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000242065
(
AB080590
)
(Bromodomain containing protein.)
genome : 40,574,292 - 40,601,318 (27,027)
query : 1 - 1,357 (1,357/1,357)
12 exons
identity = 0.997
3'(0.994;0.994;1.000;0.976;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000522375 (
ENST00000424441
)
(Bromodomain containing protein.)
genome : 40,574,292 - 40,601,318 (27,027)
query : 1 - 1,356 (1,356/1,356)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000578129 (
ENST00000473813
)
(Bromodomain containing protein.)
genome : 40,581,712 - 40,590,586 (8,875)
query : 1 - 944 (944/944)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 6, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0175184
HIT000517258 (
ENST00000419324
)
(Tim10/DDP family zinc finger domain containing protein.)
genome : 40,588,550 - 40,589,432 (883)
query : 1 - 266 (266/266)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175184)
HIX0175260
HIT000533542 (
ENST00000435608
)
(Hypothetical short protein.)
genome : 40,589,032 - 40,591,731 (2,700)
query : 1 - 476 (476/489)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175260)
HIX0227118
HIT000128229 (
ENST00000333229
)
(Bromodomain containing protein.)
genome : 40,556,102 - 40,685,745 (129,644)
query : 1 - 10,141 (10,141/10,141)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000207502 (
NM_018963
)
(Bromodomain containing protein.)
genome : 40,557,404 - 40,685,712 (128,309)
query : 1 - 8,806 (8,806/8,826)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000211430 (
NM_033656
)
(Bromodomain containing protein.)
genome : 40,557,404 - 40,685,712 (128,309)
query : 1 - 17,886 (17,886/17,906)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000246587
(
AJ292465
)
Representative transcript
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,558,069 - 40,685,496 (127,428)
query : 1 - 7,925 (7,925/7,925)
42 exons
identity = 1.000
3'(1.000;1.000;0.999;1.000;0.995;1.000;1.000;
1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000135079 (
ENST00000342449
)
(Bromodomain containing protein.)
genome : 40,562,145 - 40,685,496 (123,352)
query : 1 - 12,929 (12,929/12,929)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000245233
(
AJ238214
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,562,172 - 40,685,516 (123,345)
query : 1 - 12,935 (12,935/12,935)
41 exons
identity = 0.996
3'(0.993;0.999;1.000;1.000;1.000;1.000;1.000;
0.976;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000242061
(
AB080586
)
(Bromodomain and WD repeat-containing protein 1 isoform B.)
genome : 40,565,743 - 40,685,516 (119,774)
query : 1 - 9,352 (9,352/9,380)
41 exons
identity = 0.999
3'(0.999;0.999;1.000;1.000;1.000;1.000;1.000;
0.976;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000242062
(
AB080587
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,565,743 - 40,685,516 (119,774)
query : 1 - 7,605 (7,605/7,633)
42 exons
identity = 0.999
3'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000362078 (
ENST00000380800
)
(Bromodomain containing protein.)
genome : 40,565,743 - 40,685,516 (119,774)
query : 1 - 7,605 (7,605/7,605)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000246588
(
AJ292466
)
(Bromodomain and WD repeat-containing protein 1 isoform B.)
genome : 40,567,130 - 40,685,496 (118,367)
query : 1 - 7,939 (7,939/7,939)
41 exons
identity = 0.997
3'(0.992;0.999;1.000;0.995;1.000;1.000;1.000;
0.976;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0197131
pHIT000036353 ( pHIT000036353 )
Representative transcript
(Hypothetical protein.)
genome : 40,468,579 - 40,470,970 (2,392)
query : 1 - 324 (324/324)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197131)
CAGE tag :
H04BA74K1405,H05BB25N2403,H05BB57E0406
H05BC23A2201,H08BA26H2307
AP001407.1
39000001-39010065 F +
NCBI
AP001436.1
39010066-39085923 F +
NCBI
AP001416.1
39085924-39088293 F +
NCBI
AP001430.1
39088294-39128321 F +
NCBI
AP001408.1
39128322-39135955 F +
NCBI
AP001411.1
39135956-39160878 F +
NCBI
AP001424.1
39160879-39219804 F +
NCBI
AP001433.1
39219805-39279886 F +
NCBI
AP001427.1
39279887-39337344 F +
NCBI
AP001415.1
39337345-39389968 F +
NCBI
AP001410.1
39389969-39429610 F +
NCBI
AP001420.1
39429611-39436262 F +
NCBI
AP001409.1
39436263-39439910 F +
NCBI
AP001417.2
39439911-39528654 O +
NCBI
AP001425.1
39528655-39588018 F +
NCBI
AP001434.1
39588019-39655529 F +
NCBI
AP001438.1
39655530-39671653 F +
NCBI
AP001422.1
39671654-39754269 F +
NCBI
AP001423.1
39754270-39768149 F +
NCBI
AP001426.2
39768150-39853436 O +
NCBI
AP001035.1
39853437-39860497 F +
NCBI
AP001036.1
39860498-39861677 F +
NCBI
AP001037.1
39861678-39974144 F +
NCBI
AP001038.2
39974145-40116029 F +
NCBI
AP001039.1
40116030-40147309 F +
NCBI
AP001040.1
40147310-40192798 F +
NCBI
AP001041.1
40192799-40215690 F +
NCBI
AP001042.1
40215691-40254665 F +
NCBI
AP001043.1
40254666-40283131 F +
NCBI
AP001044.2
40283132-40295471 F +
NCBI
AP001045.1
40295472-40300274 F +
NCBI
AF064858.2
40300275-40495043 F +
NCBI
AF064859.1
40495044-40534651 F +
NCBI
AF129408.4
40534652-40600000 F +
NCBI