Clickable map CGI

HIX0005032
HIT000607221 ( ENST00000507217 )
  (Hypothetical short protein.)
  genome : 91,378,414 - 91,751,391 (372,978)
  query : 1 - 528 (528/576)
  3 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 0.917
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 17, nucl 8, cyto_nucl 7.5, cyto 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005032)

HIX0005032
HIT000013099 ( AK056485 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 91,495,354 - 91,742,351 (246,998)
  query : 1 - 2,956 (2,956/2,956)
  5 exons
  identity = 0.996
  5'(1.000;1.000;1.000;0.995)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, extr 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005032)
  Ortholog candidate  ( -> Evola )
    Pan sp. (Chimpanzee) : XM_001139594

HIX0005032
HIT000603253 ( ENST00000502934 )
  (Conserved hypothetical protein.)
  genome : 91,495,354 - 91,742,351 (246,998)
  query : 1 - 2,957 (2,957/2,957)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, extr 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005032)

HIX0206959
HIT000611047 ( ENST00000511323 )
  (Hypothetical short protein.)
  genome : 91,625,047 - 91,628,401 (3,355)
  query : 1 - 278 (278/278)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206959)

HIX0207091
HIT000611885 ( ENST00000512210 )
  (Non-protein coding transcript.)
  genome : 91,745,963 - 91,975,204 (229,242)
  query : 1 - 511 (511/511)
  4 exons
  identity = 0.996
  3'(1.000;1.000;1.000;0.963)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0207091)

HIX0207091
HIT000613324 ( ENST00000513779 )
  (Conserved hypothetical protein.)
  genome : 91,767,910 - 91,996,570 (228,661)
  query : 1 - 339 (339/339)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 23, nucl 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0207091)

HIX0207091
HIT000611954 ( ENST00000512284 )
  (Non-protein coding transcript.)
  genome : 91,889,150 - 91,895,740 (6,591)
  query : 1 - 264 (264/264)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0207091)

HIX0206271
HIT000611911 ( ENST00000512237 )
  (Hypothetical protein.)
  genome : 91,990,555 - 92,006,441 (15,887)
  query : 1 - 952 (952/952)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 10, cyto 9.5, mito 8, cyto_nucl 7.5, nucl 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206271)

HIX0206271
HIT000613355 ( ENST00000513812 )
  (Hypothetical short protein.)
  genome : 92,005,577 - 92,014,848 (9,272)
  query : 1 - 572 (572/572)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 11.5, extr 7, nucl 3.5,
    extr_plas 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206271)

HIX0206561
HIT000603775 ( ENST00000503489 )
  (Hypothetical short protein.)
  genome : 92,011,663 - 92,023,961 (12,299)
  query : 1 - 730 (730/730)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 8, cyto_nucl 7.33333, cyto_pero 5,
    nucl 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206561)

HIX0164557
HIT000506926 ( ENST00000408883 )
  (Non-protein coding transcript.)
  genome : 92,053,139 - 92,053,220 (82)
  query : 1 - 82 (82/82)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0164557)

HIX0206511
HIT000602741 ( ENST00000502383 )
  (Hypothetical short protein.)
  genome : 92,161,962 - 92,179,711 (17,750)
  query : 1 - 585 (585/585)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 20.5, cyto_nucl 13.5, cyto 5.5, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206511)

HIX0207143
HIT000614374 ( ENST00000514909 )
  (Conserved hypothetical protein.)
  genome : 92,176,514 - 92,177,335 (822)
  query : 1 - 822 (822/822)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11.5, extr 10, cyto_mito 9, cyto_nucl 7.66667,
    nucl 5.5, cyto 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0207143)

HIX0206446
HIT000583190 ( ENST00000479109 )
  (Chaperonin Cpn60/TCP-1 family protein.)
  genome : 92,225,094 - 92,226,547 (1,454)
  query : 1 - 1,454 (1,454/1,454)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 13, mito 9, nucl 4.5,
    E.R._mito 4.5, mito_pero 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206446)

HIX0206775
HIT000607481 ( ENST00000507491 )
  (Conserved hypothetical protein.)
  genome : 92,242,887 - 92,275,298 (32,412)
  query : 1 - 707 (707/707)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 20, mito 5, cyto 3, E.R._mito 3, mito_pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206775)

HIX0207156
HIT000614603 ( ENST00000515153 )
  (Hypothetical short protein.)
  genome : 92,355,369 - 92,404,375 (49,007)
  query : 1 - 625 (625/625)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, nucl 9, cyto 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0207156)

HIX0206953
HIT000610949 ( ENST00000511220 )
  (DNA polymerase alpha/epsilon, subunit B domain containing protein.)
  genome : 92,603,135 - 92,604,131 (997)
  query : 1 - 997 (997/997)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 26, cyto 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206953)

HIX0021797
HIT000044572 ( AK124699 )
  (Conserved hypothetical protein.)
  genome : 92,745,065 - 92,906,499 (161,435)
  query : 1 - 3,380 (3,380/3,380)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 10, plas 6.5, extr_plas 6, cyto_mito 6,
    cyto_pero 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000486530 ( NR_015369 )
  (Conserved hypothetical protein.)
  genome : 92,745,065 - 92,906,499 (161,435)
  query : 1 - 3,380 (3,380/3,380)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 10, plas 6.5, extr_plas 6, cyto_mito 6,
    cyto_pero 6
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000056157 ( BX647510 )
  (Conserved hypothetical protein.)
  genome : 92,745,528 - 92,899,116 (153,589)
  query : 1 - 2,046 (2,046/2,064)
  6 exons
  identity = 1.000
  3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 12.5, extr 8, nucl 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000097394 ( BC042879 )
  (Conserved hypothetical protein.)
  genome : 92,745,530 - 92,916,925 (171,396)
  query : 1 - 2,246 (2,246/2,261)
  7 exons
  identity = 0.997
  3'(0.997;1.000;0.992;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, extr 10, cyto 9.5, nucl 7.5, mito 2,
    cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000486551 ( NR_021491 )
  (Conserved hypothetical protein.)
  genome : 92,746,502 - 92,916,953 (170,452)
  query : 1 - 1,184 (1,184/1,184)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, extr 10, cyto 9.5, nucl 7.5, mito 2,
    cysk 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000430009 ( AK311143 )
  (Conserved hypothetical protein.)
  genome : 92,746,653 - 92,916,925 (170,273)
  query : 1 - 1,005 (1,005/1,005)
  6 exons
  identity = 0.997
  3'(1.000;0.974;0.990;0.992;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, extr 10, cyto 9.5, nucl 7.5, mito 2,
    cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000089568 ( BC018089 )
  (Hypothetical short protein.)
  genome : 92,746,724 - 92,917,003 (170,280)
  query : 1 - 973 (973/992)
  5 exons
  identity = 0.997
  3'(0.998;1.000;0.992;1.000;0.994)5'
  coverage = 0.996
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11.5, cyto 10.5, extr 9, nucl 7.5, cysk 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000097892 ( BC044619 )
  (Hypothetical short protein.)
  genome : 92,746,732 - 92,906,525 (159,794)
  query : 1 - 1,426 (1,426/1,442)
  9 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)5'
  coverage = 0.999
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, extr 10, cyto 9.5, nucl 7.5, mito 2,
    cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000099051 ( BC048999 )
  (Hypothetical short protein.)
  genome : 92,746,732 - 92,906,525 (159,794)
  query : 1 - 1,426 (1,426/1,442)
  9 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)5'
  coverage = 0.999
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, extr 10, cyto 9.5, nucl 7.5, mito 2,
    cysk 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000490905 ( AK296281 )
  (Conserved hypothetical protein.)
  genome : 92,746,995 - 92,916,713 (169,719)
  query : 1 - 862 (862/862)
  3 exons
  identity = 0.998
  3'(1.000;1.000;0.996)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15, cyto 4.5, extr 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000610063 ( ENST00000510254 )
  (Conserved hypothetical protein.)
  genome : 92,746,995 - 92,916,713 (169,719)
  query : 1 - 862 (862/862)
  3 exons
  identity = 0.998
  3'(1.000;1.000;0.996)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15, cyto 4.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000502750 ( BC144330 )
  (Hypothetical protein.)
  genome : 92,747,153 - 92,907,049 (159,897)
  query : 1 - 1,842 (1,842/1,842)
  5 exons
  identity = 0.999
  3'(1.000;0.990;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 11, mito 9, cyto 7.5, cyto_pero 4.5, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000502751 ( BC144331 )
  (Hypothetical protein.)
  genome : 92,747,153 - 92,907,049 (159,897)
  query : 1 - 1,963 (1,963/1,963)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 11, mito 9, cyto 7.5, cyto_pero 4.5, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0032245
HIT000066897 ( AF086018 )
  Representative transcript
  (Hypothetical short protein.)
  genome : 92,763,995 - 92,764,346 (352)
  query : 1 - 352 (352/361)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto_nucl 7.5, cyto 7, cyto_plas 6.16667
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032245)

HIX0021797
HIT000486550 ( NR_021490 )
  (Conserved hypothetical protein.)
  genome : 92,877,578 - 92,917,003 (39,426)
  query : 1 - 2,755 (2,755/2,791)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 8.5, nucl 8, cyto 7
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000087519 ( BC010610 )
  (Conserved hypothetical protein.)
  genome : 92,877,578 - 92,916,994 (39,417)
  query : 1 - 2,746 (2,746/2,782)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 8.5, nucl 8, cyto 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000020574 ( AK095719 )
  (Conserved hypothetical protein.)
  genome : 92,877,578 - 92,917,003 (39,426)
  query : 2 - 2,869 (2,868/2,869)
  7 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 8.5, nucl 8, cyto 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000604688 ( ENST00000504474 )
  (Conserved hypothetical protein.)
  genome : 92,877,578 - 92,917,003 (39,426)
  query : 1 - 2,868 (2,868/2,868)
  7 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto_nucl 8.5, nucl 8, cyto 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000430189 ( AK311323 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 92,879,248 - 92,916,738 (37,491)
  query : 2 - 1,496 (1,495/1,498)
  6 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;1.000;0.995)5'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15, cyto 4.5, extr 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000603443 ( ENST00000503134 )
  (Conserved hypothetical protein.)
  genome : 92,879,248 - 92,916,738 (37,491)
  query : 1 - 1,495 (1,495/1,495)
  6 exons
  identity = 0.999
  3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15, cyto 4.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000607925 ( ENST00000507963 )
  (Conserved hypothetical protein.)
  genome : 92,889,459 - 92,916,761 (27,303)
  query : 1 - 922 (922/922)
  4 exons
  identity = 0.998
  3'(1.000;1.000;1.000;0.997)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 15, cyto 4.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0021797
HIT000612656 ( ENST00000513055 )
  (Conserved hypothetical protein.)
  genome : 92,889,467 - 92,921,354 (31,888)
  query : 1 - 645 (645/645)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11, extr 10, cyto 9.5, nucl 7.5, mito 2,
    cysk 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0021797)

HIX0206294
eHIT000018431 ( ESTsASS_5_282 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 92,907,186 - 92,908,760 (1,575)
  query : 1 - 620 (620/620)
  3 exons
  ESTs assembly
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206294)
  ESTs used for assembly :
    BI045688,AA759002

HIX0017923
HIT000124844 ( ENST00000327111 )
  (COUP transcription factor 1; COUP-TF1; COUP transcription factor I; COUP-TF I; Nuclear receptor subfamily 2 group F member 1; V-erbA-related protein 3; EAR-3;)
  genome : 92,919,043 - 92,930,321 (11,279)
  query : 1 - 3,732 (3,732/3,732)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 30
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)

HIX0017923
HIT000089318 ( BC017493 )
  Representative transcript
  (COUP transcription factor 1; COUP-TF1; COUP transcription factor I; COUP-TF I; Nuclear receptor subfamily 2 group F member 1; V-erbA-related protein 3; EAR-3;)
  genome : 92,919,043 - 92,929,785 (10,743)
  query : 1 - 3,196 (3,196/3,210)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000536 : Nuclear hormone receptor, ligand-binding, core
    IPR001628 : Zinc finger, nuclear hormone receptor-type
    IPR001723 : Steroid hormone receptor
    IPR003068 : Transcription factor COUP
    IPR008946 : Nuclear hormone receptor, ligand-binding
    IPR013088 : Zinc finger, NHR/GATA-type
  GO :
    0003677 : Molecular Function : DNA binding
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0003707 : Molecular Function : steroid hormone receptor activity
    0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
    0005634 : Cellular Component : nucleus
    0006355 : Biological Process : regulation of transcription, DNA-templated
    0008270 : Molecular Function : zinc ion binding
    0043401 : Biological Process : steroid hormone mediated signaling pathway
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 30
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)
  Ortholog candidate  ( -> Evola )
    Bos sp. (Cow) : AJ249440
    Danio sp. (Zebrafish) : BC056574
    Equus sp. (Horse) : ENSECAT00000019783
    Gallus sp. (Chicken) : ENSGALT00000023630
    Oryzias sp. (Medaka) : ENSORLT00000012775
    Pongo sp. (Orangutan) : ENSPPYT00000018181
    Tetraodon sp. (Tetraodon) : GSTENT00006911001
    Takifugu sp. (Fugu) : SINFRUT00000134772
    Takifugu sp. (Fugu) : SINFRUT00000138742
    Mus sp. (Mouse) : X74134
    Macaca sp. (Macaque) : XM_001089115
    Pan sp. (Chimpanzee) : XM_517657
    Canis sp. (Dog) : XM_852342
    Monodelphis sp. (Opossum) : XR_030162

HIX0017923
HIT000202329 ( NM_005654 )
  (COUP transcription factor 1; COUP-TF1; COUP transcription factor I; COUP-TF I; Nuclear receptor subfamily 2 group F member 1; V-erbA-related protein 3; EAR-3;)
  genome : 92,919,043 - 92,929,785 (10,743)
  query : 1 - 3,196 (3,196/3,210)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 30
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)

HIX0017923
HIT000612329 ( ENST00000512697 )
  (Nuclear receptor subfamily 2 group F member 1-A; COUP transcription factor 1-A; COUP-TFalpha-A; zCOUP-TFI; Seven-up related 44; Svp[44]; zSvp[44]; Steroid receptor homolog SVP 44;)
  genome : 92,922,807 - 92,924,039 (1,233)
  query : 1 - 560 (560/560)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 12, cyto_nucl 11.1667, extr 11, cyto 6,
    cyto_pero 4.83333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)

HIX0017923
HIT000603296 ( ENST00000502982 )
  (Nuclear receptor subfamily 2 group F member 1-A; COUP transcription factor 1-A; COUP-TFalpha-A; zCOUP-TFI; Seven-up related 44; Svp[44]; zSvp[44]; Steroid receptor homolog SVP 44;)
  genome : 92,923,166 - 92,924,094 (929)
  query : 1 - 584 (584/584)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto 11, cyto_nucl 10.5, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)

HIX0017923
HIT000606241 ( ENST00000506162 )
  (COUP transcription factor 1; COUP-TF1; COUP transcription factor I; COUP-TF I; Nuclear receptor subfamily 2 group F member 1; V-erbA-related protein 3; EAR-3;)
  genome : 92,927,679 - 92,929,849 (2,171)
  query : 1 - 796 (796/796)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto_nucl 9, cyto 8, nucl 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)

HIX0017923
HIT000067526 ( AF087978 )
  (Hypothetical short protein.)
  genome : 92,929,723 - 92,930,314 (592)
  query : 1 - 592 (592/601)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, cyto 8.5, cyto_nucl 8, extr 7, nucl 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017923)

HIX0024885
HIT000045888 ( AK126015 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 92,936,063 - 92,939,304 (3,242)
  query : 1 - 3,242 (3,242/3,242)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 26, cyto 2, pero 2, cyto_pero 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0024885)
  Ortholog candidate  ( -> Evola )
    Equus sp. (Horse) : ENSECAT00000019489
    Macaca sp. (Macaque) : ENSMMUT00000008682
    Pongo sp. (Orangutan) : ENSPPYT00000018182

HIX0216318
HIT000065784 ( AF070617 )
  (Hypothetical short protein.)
  genome : 92,953,777 - 92,955,080 (1,304)
  query : 1 - 1,304 (1,304/1,326)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 17, mito 9.5, mito_pero 5.5, cyto 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0216318)

HIX0216318
HIT000087760 ( BC012007 )
  (Hypothetical protein.)
  genome : 92,955,040 - 92,956,540 (1,501)
  query : 1 - 1,504 (1,504/1,556)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 15, cyto 14, nucl 10, extr 4, mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0216318)

HIX0216318
HIT000428608 ( AK309742 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 92,955,956 - 92,957,172 (1,217)
  query : 1 - 980 (980/980)
  2 exons
  identity = 0.995
  3'(0.999;0.962)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 17, nucl 13
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0216318)

HIX0216318
HIT000615319 ( ENST00000515916 )
  (Non-protein coding transcript.)
  genome : 92,956,402 - 92,956,494 (93)
  query : 1 - 93 (93/93)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0216318)

HIX0216318
HIT000658660 ( NR_031754 )
  (Non-protein coding transcript.)
  genome : 92,956,402 - 92,956,494 (93)
  query : 1 - 93 (93/93)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0216318)

HIX0206300
eHIT000018699 ( ESTsASS_5_550 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 92,957,438 - 93,009,785 (52,348)
  query : 1 - 938 (938/938)
  3 exons
  ESTs assembly
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206300)
  ESTs used for assembly :
    BI822934

HIX0184006
HIT000603114_02 ( ENST00000502784 )
  (Nucleoplasmin family protein.)
  genome : 93,018,544 - 93,019,373 (830)
  query : 1 - 830 (830/830)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14, cyto_nucl 11.3333, cyto_pero 8, nucl 5.5,
    mito 4.5, extr 4, golg 3, E.R._mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0184006)

HIX0206923
HIT000022824 ( AK097970 )
  (Conserved hypothetical protein.)
  genome : 93,068,926 - 93,071,052 (2,127)
  query : 1 - 2,127 (2,127/2,127)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 16, E.R._mito 4.83333, nucl 4, E.R. 3.5, plas 3,
    mito 3, mito_pero 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206923)

HIX0206923
HIT000610402 ( ENST00000510627 )
  (POU-specific domain containing protein.)
  genome : 93,075,976 - 93,077,309 (1,334)
  query : 1 - 1,334 (1,334/1,334)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206923)

HIX0206923
HIT000214214 ( NM_153216 )
  (POU-specific domain containing protein.)
  genome : 93,076,015 - 93,077,309 (1,295)
  query : 1 - 1,295 (1,295/1,295)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0206923)

HIX0005033
HIT000210361 ( NM_032042 )
  (Protein FAM172A isoform 1 precursor.)
  genome : 92,953,431 - 93,447,404 (493,974)
  query : 1 - 4,720 (4,720/4,720)
  11 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    nucl 10.5, extr 9, cyto_nucl 9, cyto 6.5, plas 2,
    mito 2, E.R. 2, E.R._mito 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000653833 ( NM_001163417 )
  (Protein FAM172A isoform 2.)
  genome : 92,953,431 - 93,447,404 (493,974)
  query : 1 - 4,596 (4,596/4,596)
  10 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto 11, plas 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000653834 ( NM_001163418 )
  (Protein FAM172A isoform 3.)
  genome : 92,953,431 - 93,447,404 (493,974)
  query : 1 - 4,404 (4,404/4,404)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto 12
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000657716 ( NR_028080 )
  (Protein FAM172A isoform 3.)
  genome : 92,953,431 - 93,447,404 (493,974)
  query : 1 - 4,427 (4,427/4,427)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, nucl 11, extr 3, mito 2.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000038836 ( BC020584 )
  (Protein FAM172A isoform 1 precursor.)
  genome : 92,953,776 - 93,410,465 (456,690)
  query : 1 - 4,178 (4,178/4,192)
  10 exons
  identity = 1.000
  3'(0.999)5'
  coverage = 1.000
  InterPro :
    IPR019154 : Arb2 domain
    IPR029058 : Alpha/Beta hydrolase fold
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    nucl 10.5, extr 9, cyto_nucl 9, cyto 6.5, plas 2,
    mito 2, E.R. 2, E.R._mito 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000479325 ( ENST00000395965 )
  (Protein FAM172A isoform 1 precursor.)
  genome : 92,953,775 - 93,447,340 (493,566)
  query : 1 - 4,312 (4,312/4,312)
  11 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    nucl 10.5, extr 9, cyto_nucl 9, cyto 6.5, plas 2,
    mito 2, E.R. 2, E.R._mito 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000490503 ( AK295879 )
  (Protein FAM172A isoform 3.)
  genome : 92,956,397 - 93,447,353 (490,957)
  query : 1 - 1,390 (1,390/1,390)
  9 exons
  identity = 0.998
  3'(0.993)5'
  coverage = 1.000
  InterPro :
    IPR019154 : Arb2 domain
    IPR029058 : Alpha/Beta hydrolase fold
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto 12
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000605972 ( ENST00000505869 )
  (Protein FAM172A isoform 3.)
  genome : 92,956,397 - 93,447,353 (490,957)
  query : 1 - 1,387 (1,387/1,387)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto 12
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000491307 ( AK296683 )
  (Protein FAM172A isoform 1 precursor.)
  genome : 92,956,435 - 93,447,376 (490,942)
  query : 1 - 901 (901/901)
  5 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 23, cyto_nucl 4.5, nucl 4, cyto 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000492095 ( AK297471 )
  (Protein FAM172A isoform 2.)
  genome : 92,956,589 - 93,410,425 (453,837)
  query : 1 - 1,031 (1,031/1,031)
  8 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR029058 : Alpha/Beta hydrolase fold
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, nucl 11, extr 3, mito 2.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000609587 ( ENST00000509739 )
  (Protein FAM172A isoform 2.)
  genome : 92,956,589 - 93,410,425 (453,837)
  query : 1 - 1,031 (1,031/1,031)
  8 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, nucl 11, extr 3, mito 2.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000491610 ( AK296986 )
  (Protein FAM172A isoform 2.)
  genome : 92,956,635 - 93,447,381 (490,747)
  query : 1 - 1,369 (1,369/1,369)
  10 exons
  identity = 0.999
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR019154 : Arb2 domain
    IPR029058 : Alpha/Beta hydrolase fold
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto 11, plas 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000609044 ( ENST00000509163 )
  (Protein FAM172A isoform 2.)
  genome : 92,956,635 - 93,447,381 (490,747)
  query : 1 - 1,369 (1,369/1,369)
  10 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto 11, plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000489751 ( AK295127 )
  (Protein FAM172A isoform 3.)
  genome : 92,956,787 - 93,447,404 (490,618)
  query : 1 - 1,392 (1,392/1,392)
  11 exons
  identity = 0.999
  3'(1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR019154 : Arb2 domain
    IPR029058 : Alpha/Beta hydrolase fold
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 23, nucl 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0005033
HIT000602854 ( ENST00000502503 )
  (Protein FAM172A isoform 3.)
  genome : 92,956,787 - 93,447,404 (490,618)
  query : 1 - 1,392 (1,392/1,392)
  11 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 24, nucl 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0005033)

HIX0184006
pHIT000009448 ( pHIT000009448 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 93,019,017 - 93,019,232 (216)
  query : 1 - 216 (216/216)
  1 exon
  InterPro :
    IPR004301 : Nucleoplasmin
    IPR024057 : Nucleoplasmin core domain
  GO :
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  JIGSAW prediction
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0184006)
  CAGE tag :
    H04BA32G0801,H05BE35A1707,H21BA31B0315
    H22BB43J1203,H22BB93M0602
  Ortholog candidate  ( -> Evola )
    Rattus sp. (Rat) : ENSRNOT00000048926
    Pan sp. (Chimpanzee) : XM_001139110
    Monodelphis sp. (Opossum) : XM_001366477
    Mus sp. (Mouse) : XM_486188
    Canis sp. (Dog) : XM_532930
    Macaca sp. (Macaque) : XR_010527

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )