bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSMMUT00000003581
genome : 105,760,189 - 105,844,000 (83,812)
query : 1 - 2,804 (2,804/2,804)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001104435
genome : 105,826,475 - 105,845,729 (19,255)
query : 1 - 4,420 (4,420/4,420)
9 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000003582
genome : 105,826,510 - 105,843,803 (17,294)
query : 1 - 2,489 (2,489/2,489)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB046040
Representative transcript
genome : 105,827,339 - 105,843,753 (16,415)
query : 1 - 2,081 (2,081/2,086)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.996;0.995;1.000;
1.000)3'
coverage = 0.998
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000099354
Pan
sp. (Chimpanzee) : XM_001147844
Pongo
sp. (Orangutan) : ENSPPYT00000022624
Mus
sp. (Mouse) : AK132781
Rattus
sp. (Rat) : ENSRNOT00000060550
Canis
sp. (Dog) : XM_533558
Equus
sp. (Horse) : XM_001492181
Bos
sp. (Cow) : BC151750
Monodelphis
sp. (Opossum) : XM_001378825
Gallus
sp. (Chicken) : XM_414322
Danio
sp. (Zebrafish) : BC129183
Oryzias
sp. (Medaka) : ENSORLT00000016231
Tetraodon
sp. (Tetraodon) : GSTENT00033286001
Takifugu
sp. (Fugu) : SINFRUT00000133409
AB179067
genome : 105,831,233 - 105,844,034 (12,802)
query : 1 - 2,030 (2,030/2,064)
5 exons
identity = 1.000
5'(1.000;0.999;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000099354
(
BC051654
)
genome : 105,760,210 - 105,845,730 (85,521)
query : 1 - 4,478 (4,478/4,515)
10 exons
identity = 0.955
5'(0.959;0.988;1.000;0.971;0.964;0.989;0.982;
0.943)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000044785
(
AK124912
)
genome : 105,826,590 - 105,834,436 (7,847)
query : 1 - 1,937 (1,937/1,937)
6 exons
identity = 0.970
5'(0.973;0.965;1.000;1.000;0.971;0.965)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000019486
(
AK094631
)
genome : 105,833,634 - 105,845,476 (11,843)
query : 1 - 2,935 (2,935/2,935)
4 exons
identity = 0.953
5'(0.963;0.995;0.991;0.942)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000019628
(
AK094773
)
genome : 105,834,331 - 105,845,729 (11,399)
query : 1 - 2,488 (2,488/2,488)
4 exons
identity = 0.952
5'(0.982;0.995;0.991;0.943)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000022888
(
AK098034
)
genome : 105,846,813 - 105,848,435 (1,623)
query : 179 - 1,822 (1,644/1,823)
1 exon
identity = 0.925
5'(0.925)3'
coverage = 0.902
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
105815546-105855545 F +