bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000007627
Representative transcript
genome : 30,014,055 - 30,020,403 (6,349)
query : 1 - 1,795 (1,795/1,795)
18 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000000377
Pan
sp. (Chimpanzee) : ENSPTRT00000006680
Pongo
sp. (Orangutan) : CR857710
Macaca
sp. (Macaque) : AB172217
Mus
sp. (Mouse) : BC016669
Rattus
sp. (Rat) : XM_342465
Canis
sp. (Dog) : XM_540752
Equus
sp. (Horse) : ENSECAT00000026578
Bos
sp. (Cow) : BC123504
Monodelphis
sp. (Opossum) : ENSMODT00000035751
Gallus
sp. (Chicken) : CR406685
Danio
sp. (Zebrafish) : BC054904
Takifugu
sp. (Fugu) : SINFRUT00000165334
ENSORLT00000007631
genome : 30,014,093 - 30,020,403 (6,311)
query : 1 - 1,529 (1,529/1,529)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000007714
Representative transcript
genome : 30,022,378 - 30,031,364 (8,987)
query : 1 - 3,330 (3,330/3,330)
26 exons
identity = 0.997
3'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000054220
Pan
sp. (Chimpanzee) : XM_528532
Pongo
sp. (Orangutan) : ENSPPYT00000022417
Macaca
sp. (Macaque) : XM_001112858
Mus
sp. (Mouse) : BC056759
Rattus
sp. (Rat) : XM_001080315
Canis
sp. (Dog) : ENSCAFT00000002102
Equus
sp. (Horse) : XM_001493360
Bos
sp. (Cow) : XM_605078
Tetraodon
sp. (Tetraodon) : GSTENT00007135001
Takifugu
sp. (Fugu) : SINFRUT00000165332
H.sapiens
(Human) : HIT000325484
Pan
sp. (Chimpanzee) : XM_001140931
Pongo
sp. (Orangutan) : CR859567
Macaca
sp. (Macaque) : AB168361
Mus
sp. (Mouse) : AF294327
Rattus
sp. (Rat) : ENSRNOT00000014859
Canis
sp. (Dog) : XM_542647
Equus
sp. (Horse) : XM_001492682
Monodelphis
sp. (Opossum) : XM_001377082
Gallus
sp. (Chicken) : BX935446
Danio
sp. (Zebrafish) : BC142883
ENSORLT00000007726
Representative transcript
genome : 30,034,345 - 30,073,736 (39,392)
query : 1 - 1,403 (1,403/1,403)
7 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000007730
genome : 30,034,345 - 30,035,842 (1,498)
query : 1 - 667 (667/667)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
scaffold22_contig17820
30018871-30022004 W -
10
30022005-30022014 N
scaffold22_contig17819
30022015-30024200 W -
10
30024201-30024210 N
scaffold22_contig17818
30024211-30034870 W -
AT_rich
A-rich
AT_rich
AT_rich
AT_rich