bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000007980
Representative transcript
genome : 30,766,364 - 30,770,028 (3,665)
query : 1 - 1,692 (1,692/1,692)
10 exons
identity = 0.995
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000307036
Pan
sp. (Chimpanzee) : XM_001137592
Pongo
sp. (Orangutan) : ENSPPYT00000015845
Macaca
sp. (Macaque) : ENSMMUT00000028603
Mus
sp. (Mouse) : BC082574
Rattus
sp. (Rat) : XM_001055321
Canis
sp. (Dog) : XM_545056
Equus
sp. (Horse) : XM_001502982
Bos
sp. (Cow) : ENSBTAT00000006796
Monodelphis
sp. (Opossum) : XM_001380285
Gallus
sp. (Chicken) : AJ719675
Danio
sp. (Zebrafish) : AF506213
Tetraodon
sp. (Tetraodon) : GSTENT00015801001
Takifugu
sp. (Fugu) : SINFRUT00000179131
ENSORLT00000007985
Representative transcript
genome : 30,771,263 - 30,771,709 (447)
query : 1 - 447 (447/447)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000020705
Pan
sp. (Chimpanzee) : XR_023532
Pongo
sp. (Orangutan) : ENSPPYT00000006487
Macaca
sp. (Macaque) : XR_011518
Mus
sp. (Mouse) : BC080839
Rattus
sp. (Rat) : BC098699
Canis
sp. (Dog) : XM_542653
Equus
sp. (Horse) : ENSECAT00000003028
Monodelphis
sp. (Opossum) : XM_001376670
Gallus
sp. (Chicken) : BX932074
Danio
sp. (Zebrafish) : BC081599
Tetraodon
sp. (Tetraodon) : CR677365
Takifugu
sp. (Fugu) : SINFRUT00000180530
ENSORLT00000008007
Representative transcript
genome : 30,774,462 - 30,804,574 (30,113)
query : 1 - 3,153 (3,153/3,153)
26 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.968;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
0.964;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000096781
Pan
sp. (Chimpanzee) : ENSPTRT00000024359
Pongo
sp. (Orangutan) : CR859100
Macaca
sp. (Macaque) : XM_001089334
Mus
sp. (Mouse) : BC030329
Rattus
sp. (Rat) : XM_224535
Canis
sp. (Dog) : XM_534170
Equus
sp. (Horse) : XM_001490998
Bos
sp. (Cow) : XM_610432
Monodelphis
sp. (Opossum) : XM_001366189
Danio
sp. (Zebrafish) : ENSDART00000065236
Danio
sp. (Zebrafish) : XM_001343826
Oryzias
sp. (Medaka) : ENSORLT00000022112
Tetraodon
sp. (Tetraodon) : GSTENT00015798001
Tetraodon
sp. (Tetraodon) : GSTENT00026111001
Takifugu
sp. (Fugu) : SINFRUT00000175658
Takifugu
sp. (Fugu) : SINFRUT00000183114
scaffold22_contig17701
30769518-30776837 W -
10
30776838-30776847 N
scaffold22_contig17700
30776848-30777781 W -
625
30777782-30778406 N
scaffold22_contig17699
30778407-30779708 W -
1001
30779709-30780709 N
scaffold22_contig17698
30780710-30795582 W -
236
30795583-30795818 N
scaffold22_contig17697
30795819-30798795 W -
10
30798796-30798805 N
scaffold22_contig17696
30798806-30802024 W -
385
30802025-30802409 N
scaffold22_contig17695
30802410-30803702 W -
672
30803703-30804374 N
scaffold22_contig17694
30804375-30808637 W -
10
30808638-30808647 N
scaffold22_contig17693
30808648-30809517 W -