bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
R.norvegicus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001074986
genome : 105,356,445 - 105,514,137 (157,693)
query : 1 - 4,532 (4,532/4,532)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001075009
Representative transcript
genome : 105,356,445 - 105,514,137 (157,693)
query : 1 - 4,627 (4,627/4,627)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000337592
Pan
sp. (Chimpanzee) : XM_001141210
Pongo
sp. (Orangutan) : CR860190
Macaca
sp. (Macaque) : DQ148041
Mus
sp. (Mouse) : BC079898
Canis
sp. (Dog) : XM_853840
Equus
sp. (Horse) : XM_001916159
Bos
sp. (Cow) : BC142520
Monodelphis
sp. (Opossum) : ENSMODT00000010860
Gallus
sp. (Chicken) : EF363024
Danio
sp. (Zebrafish) : EF463081
Oryzias
sp. (Medaka) : ENSORLT00000006826
Tetraodon
sp. (Tetraodon) : GSTENT00027165001
Takifugu
sp. (Fugu) : AY566276
XM_001075030
genome : 105,356,445 - 105,514,137 (157,693)
query : 1 - 4,591 (4,591/4,591)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001075050
genome : 105,356,445 - 105,514,137 (157,693)
query : 1 - 4,537 (4,537/4,537)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001074898
genome : 105,356,445 - 105,512,039 (155,595)
query : 1 - 2,232 (2,232/2,232)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;0.996;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001074917
genome : 105,356,445 - 105,512,039 (155,595)
query : 1 - 2,412 (2,412/2,412)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001074939
genome : 105,356,445 - 105,512,035 (155,591)
query : 1 - 2,340 (2,340/2,340)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001078707
Representative transcript
genome : 105,369,739 - 105,370,506 (768)
query : 1 - 768 (768/768)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001057042
genome : 105,369,777 - 105,370,541 (765)
query : 1 - 765 (765/765)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001074963
genome : 105,387,073 - 105,514,137 (127,065)
query : 1 - 4,432 (4,432/4,432)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000057557
genome : 105,396,281 - 105,473,840 (77,560)
query : 1 - 1,575 (1,575/1,575)
8 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.978)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000057556
genome : 105,404,692 - 105,511,473 (106,782)
query : 1 - 1,167 (1,167/1,167)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000014300
genome : 105,404,722 - 105,488,776 (84,055)
query : 1 - 1,119 (1,119/1,119)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000014315
genome : 105,404,722 - 105,488,776 (84,055)
query : 1 - 1,065 (1,065/1,065)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;0.985;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000057555
Representative transcript
genome : 105,451,663 - 105,463,435 (11,773)
query : 1 - 272 (272/272)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AABR03096050.1
105355291-105370703 W +
50
105370704-105370753 N
AABR03097382.1
105370754-105382423 W +
50
105382424-105382473 N
AABR03097884.1
105382474-105390724 W +
50
105390725-105390774 N
AABR03095510.1
105390775-105434840 W +
50
105434841-105434890 N
AABR03096882.1
105434891-105450809 W +
478
105450810-105451287 N
AABR03095544.1
105451288-105493636 W +
50
105493637-105493686 N
AABR03095460.1
105493687-105515290 W +