H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0203119 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0203119
Genomic location  G-integra Help Chromosome 21
Location 21q22.2
Position 40714235- 40721573
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3150
KEGG GENES KEGG GENES(3150)
GeneCard GeneCardHMGN1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000191073HIT000029324HIT000039709HIT000012647HIT000050046HIT000338441HIT000264111HIT000100257HIT000338871HIT000264112HIT000264911HIT000264470HIT000434276HIT000329180
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-14 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000191073
Accession number J02621.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714252- 40720987
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000029324
Accession number BC000075.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714241- 40720967
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000039709
Accession number BC023984.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714241- 40720956
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000012647
Accession number AK056033.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714242- 40718454
Strand -
Gene structure 3 exons
 
TOP 1-10 11-14 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000050046
Accession number AK130775.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714242- 40717111
Strand -
Gene structure 2 exons
 
TOP 1-10 11-14 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000338441
Accession number BC106080.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714246- 40720980
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000264111
Accession number BC070153.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714707- 40720985
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000100257
Accession number BT007337.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40715039- 40720505
Strand -
Gene structure 5 exons
 
TOP 1-10 11-14 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000338871
Accession number BC107741.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 98.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714235- 40721049
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000264112
Accession number BC070154.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 99.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714241- 40720965
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000264911
Accession number BC072672.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 99.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714246- 40720956
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000264470
Accession number BC071643.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 99.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714246- 40720945
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000434276
Accession number AK315410.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature NA
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40715038- 40720989
Strand -
Gene structure 6 exons
 
TOP 1-10 11-14 LAST 
Locus member number 14
H-Inv ID Transcript viewHIT000329180
Accession number AB209245.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P05114)  [Identity/coverage = 100.0%/42.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 21
Location 21q22.2
Position 40714242- 40720980
Strand -
Gene structure 5 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000329180Splicing isoformHIT000191073
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0203119
Representative H-Inv ID Representative H-Inv IDHIT000191073
Accession number J02621.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P05114)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol HMGN1 
HGNC aliases "high-mobility group (nonhistone chromosomal) protein 14", "high-mobility group nucleosome binding domain 1" 
HGNC name high mobility group nucleosome binding domain 1 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000084520
No. of interaction 13
Interaction partner(s) HIP000023523HIP000024846HIP000028744HIP000028744HIP000031868HIP000035690HIP000070199HIP000071195HIP000090502HIP000090914HIP000110302HIP000112084HIP000174017
BIND NA
DIP NA
MINT NA
HPRD 00962;  01230;  01498;  02092;  03183;  03382;  04078;  04677;  06789;  11980; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:3150
KEGG GENES KEGG GENES(3150)
GeneCard GeneCardHMGN1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus 200944_s_at; 
HG-U133 200944_s_at; 
HG-U133A 200944_s_at; 
HG-U133A_2 200944_s_at; 
HG-U133B NA
HG-U133_Plus_2 200944_s_at; 
HG-U95 306_s_at; 
HG-U95A 306_s_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2495244;  2566180;  3921382;  3932271;  3932277; 
HuGeneFL J02621_s_at; 
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator