H-InvDB_8.3 released on March 26, 2013.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000000180
Accession number:
AB007932
Created date:
26-Mar-2013
Last modified:
20-Apr-2012
Definition:
Similar to Plexin A2; Fragment;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Predicted CDS information
HIP ID
HIP000103981
Predicted CDS
165..5894; 1909[aa]; Orientation:+3;
Codon Adaptation Index (CAI).
0.836
MSTHRSRLLTAAPLSMEQRRPWPRALEVDSRSVVLLSVVWVLLAPPAAGM PQFSTFHSENRDWTFNHLTVHQGTGAVYVGAINRVYKLTGNLTIQVAHKT GPEEDNKSCYPPLIVQPCSEVLTLTNNVNKLLIIDYSENRLLACGSLYQG VCKLLRLDDLFILVEPSHKKEHYLSSVNKTGTMYGVIVRSEGEDGKLFIG TAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSLIKIPSDTLAL VSHFDIFYIYGFASGGFVYFLTVQPETPEGVAINSAGDLFYTSRIVRLCK DDPKFHSYVSLPFGCTRAGVEYRLLQAAYLAKPGDSLAQAFNITSQDDVL FAIFSKGQKQYHHPPDDSALCAFPIRAINLQIKGRLQSCYQGEGNLELNW LLGKDVQCTKAPVPIDDNFCGLDINQPLGGSTPVEGLTLYTTSRDRMTSV ASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVLKDGSPILRD MAFSIDQRYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGWCALHN MCSRRDKCQQAWEPNRFAASISQCVSLAVHPSSISVSEHSRLLSLVVSDA PDLSAGIACAFGNLTEVEGQVSGSQVICISPGPKDVPVIPLDQDWFGLEL QLRSKETGKIFVSTEFKFYNCSAHQLCLSCVNSAFRCHWCKYRNLCTHDP TTCSFQEGRINISEDCPQLVPTEEILIPVGEVKPITLKARNLPQPQSGQR GYECVLNIQGAIHRVPALRFNSSSVQCQNSSYQYDGMDISNLAVDFAVVW NGNFIIDNPQDLKVHLYKCAAQRESCGLCLKADRKFECGWCSGERRCTLH QHCTSPSSPWLDWSSHNVKCSNPQITEILTVSGPPEGGTRVTIHGVNLGL DFSEIAHHVQVAGVPCTPLPGEYIIAEQIVCEMGHALVGTTSGPVRLCIG ECKPEFMTKSHQQYTFVNPSVLSLNPIRGPESGGTMVTITGHYLGAGSSV AVYLGNQTCEFYGRSMSEIVCVSPPSSNGLGPVPVSVSVDRAHVDSNLQF EYIDDPRVQRIEPEWSIASGHTPLTITGFNLDVIQEPRIRVKFNGKESVN VCKVVNTTTLTCLAPSLTTDYRPGLDTVERPDEFGFVFNNVQSLLIYNDT KFIYYPNPTFELLSPTGVLDQKPGSPIILKGKNLCPPASGGAKLNYTVLI GETPCAVTVSETQLLCEPPNLTGQHKVMVHVGGMVFSPGSVSVISDSLLT LPAIVSIAAGGSLLLIIVIIVLIAYKRKSRENDLTLKRLQMQMDNLESRV ALECKEAFAELQTDINELTSDLDRSGIPYLDYRTYAMRVLFPGIEDHPVL RELEVQGNGQQHVEKALKLFAQLINNKVFLLTFIRTLELQRSFSMRDRGN VASLIMTGLQGRLEYATDVLKQLLSDLIDKNLENKNHPKLLLRRTESVAE KMLTNWFAFLLHKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSL SEDKLIRQQIEYKTLILNCVNPDNENSPEIPVKVLNCDTITQVKEKILDA VYKNVPYSQRPRAVDMDLEWRQGRIARVVLQDEDITTKIEGDWKRLNTLM HYQVSDRSVVALVPKQTSSYNIPASASISRTSISRYDSSFRYTGSPDSLR SRAPMITPDLESGVKVWHLVKNHDHGDQKEGDRGSKMVSEIYLTRLLATK GTLQKFVDDLFETLFSTVHRGSALPLAIKYMFDFLDEQADRHSIHDTDVR HTWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQTFMDSCSTS EHRLGKDSPSNKLLYAKDIPSYKSWVERYYADIAKLPAISDQDMNAYLAE QSRLHAVEFNMLSALNEIYSYVSKYSEELIGALEQDEQARRQRLAYKVEQ LINAMSIES*