H-InvDB x AHG DB
Transcript view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Invitational ID: HIT000063502 Accession number: AF039699 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Harmonin; Antigen NY-CO-38/NY-CO-37; Autoimmune enteropathy-related antigen AIE-75; Protein PDZ-73; Renal carcinoma antigen NY-REN-3; Usher syndrome type-1C protein;
 
 

Transcript annotation summary  Locus view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI viewer VaryGene H-DBAS LEGENDA Gene family TACT
H-Inv ID HIT000063502
H-Inv cluster ID Locus viewHIX0009478
H-Inv protein ID protein viewHIP000042503
Accession number AF039699.1
CAGE tag ID NA
EST ID NA
Genomic location  G-integra Help Chromosome 11
Location 11p15.1
Position 17515442- 17565949
Strand -
Transcript feature  Help NO;  Splicing isoformSplicing isoform
Coding potential  Help Protein coding; 
Definition Similar to Harmonin; Antigen NY-CO-38/NY-CO-37; Autoimmune enteropathy-related antigen AIE-75; Protein PDZ-73; Renal carcinoma antigen NY-REN-3; Usher syndrome type-1C protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9Y6N9)  [Identity/coverage = 99.241%/100.0%] to Homo sapiens (Human). protein.
Gene family / group NA
Gene symbol/name HGNC symbol USH1C
HGNC aliases "deafness, autosomal recessive 18"
HGNC name Usher syndrome 1C (autosomal recessive, severe)
DDBJ NY-CO-38
UniProt USH1C
EC number NA
KEGG metabolic pathway NA
PubMed ID 96107211050006410508479109732471131156012107438125887941470203914759258154893341630121616554811192976202014250221709241ALL
Related H-InvDB links Similarity Search ToolSimilarity Search Tool
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:10083
KEGG GENES KEGG GENES(10083)
GeneCard GeneCardUSH1C*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Mini-G