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H-Invitational ID: HIT000079478 Accession number: AF426266 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Putative uncharacterized protein C21orf88;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
46 .. 46 A/G rs190864220 - 5'UTR
60 .. 60 C/G rs74789072 - 5'UTR
90 .. 90 G/A rs141178643 - CDS Nonsynonymous[Arg5Gln]
149 .. 149 G/A rs74562558 - CDS Nonsynonymous[Gly25Arg]
189 .. 189 C/T rs75556276 - CDS Nonsynonymous[Pro38Leu]
204 ^ 205 -/G rs36074145 - CDS
222 .. 222 T/G rs77607750 - CDS AA-STOP[Leu49*]
248 .. 248 G/A rs114656184 - CDS Nonsynonymous[Gly58Arg]
287 ^ 288 -/A rs72380951 - CDS
319 .. 319 G/C rs662571 - CDS Nonsynonymous[Trp81Cys]
365 .. 365 G/A rs181126970 - CDS Nonsynonymous[Val97Met]
392 .. 392 G/A rs138630268 - CDS Nonsynonymous[Val106Ile]
441 .. 441 G/A rs150194909 - CDS Nonsynonymous[Arg122His]
490 .. 490 G/A rs140909128 - CDS Synonymous[Pro138Pro]
524 .. 524 G/A rs661650 - 3'UTR
525 .. 525 T/C rs2091883 + 3'UTR
540 .. 540 A/G rs2091884 + 3'UTR
551 .. 551 G/T rs199549042 - 3'UTR
813 .. 813 T/C rs147705310 - 3'UTR
823 .. 823 G/A rs145436618 - 3'UTR
960 .. 960 C/G rs80347837 - 3'UTR
973 ^ 974 -/CA rs72012258 - 3'UTR
1032 .. 1032 C/T rs1524931 - 3'UTR
1045 .. 1045 G/A rs115334132 - 3'UTR
1047 .. 1047 C/A rs114775849 - 3'UTR
1053 ^ 1054 -/AC rs72186248 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
MIR 34 156 -
MLT1E2 232 746 -
THE1C 756 1071 +
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer