H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID:
HIT000246587
Accession number:
AJ292465
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Predicted CDS information
HIP ID
HIP000026163
Predicted CDS
80..7042; 2320[aa]; Orientation:+2;
Codon Adaptation Index (CAI).
0.708
MAEPSSARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPK RLDWEGNEHNRSYEELVLSNKHVAPDHLLQICQRIGPMLDKEIPPSISRV TSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLV EIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHR IFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDK IIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCF WQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRM YFLGFEAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQL EWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVL KVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITK GTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKP YEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPH PTKYQRLVPGRENSADEHLIPQLGYVATSDGEVIEQIISLQTNDNDERSP ESSILDGMIRQLQQQQDQRMGADQDTIPRGLSNGEETPRRGFRRLSLDIQ SPPNIGLRRSGQVEGVRQMHQNAPRSQIATERDLQAWKRRVVVPEVPLGI FRKLEDFRLEKGEEERNLYIIGRKRKTLQLSHKSDSVVLVSQSRQRTCRR KYPNYGRRNRSWRELSSGNESSSSVRHETSCDQSEGSGSSEEDEWRSDRK SESYSESSSDSSSRYSDWTADAGINLQPPLRTSCRRRITRFCSSSEDEIS TENLSPPKRRRKRKKENKPKKENLRRMTPAELANMEHLYEFHPPVWITDT TLRKSPFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPWRKMDLR DQELVKIVGIRYEVGPPTLCCLKLAFIDPATGKLMDKSFSIRYHDMPDVI DFLVLRQFYDEARQRNWQSCDRFRSIIDDAWWFGTVLSQEPYQPQYPDSH FQCYIVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISVTTDELEKLLY KPQAGEWGQKSRDEECDRIISGIDQLLNLDIAAAFAGPVDLCTYPKYCTV VAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSA KKITDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRR VHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYPDY RDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKI YSMTLRLSALFEEKMKKISSDFKIGQKFNEKLRRSQRFKQRQNCKGDSQP NKSIRNLKPKRLKSQTKIIPELVGSPTQSTSSRTAYLGTHKTSAGISSGV TSGDSSDSAEPSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEE SKESSRARESSSRSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATRK RVYLSDSDNNSLETGEILKARAGNNRKVLRKCAAVAANKIKLMSDVEENS SSESVCSGRKLPHRNASAVARKKLLHNSEDEQSLKSEIEEEELKDENQPL PVSSSHTAQSNVDESENRDSESESDLRVARKNWHANGYKSHTPAPSKTKF LKIESSEEDSKSHDSDHACNRTAGPSTSVQKLKAESISEEADSEPGRSGG RKYNTFHKNASFFKKTKILSDSEDSESEEQDREDGKCHKMEMNPISGNLN CDPIAMSQCSSDHGCETDLDSDDDKIEKPNNFMKDSASQDNGLSRKISRK RVCSSDSDSSLQVVKKSSKARTGLLRITRRCAATAANKIKLMSDVEDVSL ENVHTRSKNGRKKPLHLACTTAKKKLSDCEGSVHCEVPSEQYACEGKPPD PDSEGSTKVLSQALNGDSDSEDMLNSEHKHRHTNIHKIDAPSKRKSSSVT SSGEDSKSHIPGSETDRTFSSESTLAQKATAENNFEVELNYGLRRWNGRR LRTYGKAPFSKTKVIHDSQETAEKEVKRKRSHPELENVKISETTGNSKFR PDTSSKSSDLGSVTESDIDCTDNTKTKRRKTKGKAKVVRKEFVPRDREPN TKVRTCMHNQKDAVQMPSETLKAKMVPEKVPRRCATVAANKIKIMSNLKE TISGPENVWIRKSSRKLPHRNASAAAKKKLLNVYKEDDTTINSESEKELE DINRKMLFLRGFRSWKENAQ*