H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000384038 Accession number: AF411109 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: 2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;
 
 

Transcript original information
Accession number AF411109.1
CAGE tag ID NA
EST ID NA
Clone Number NA
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ; Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (OXGR1) ; Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (OXGR1);
Sequence data provider NA
Annotation project NA
Length of cDNA 1014[bp] (No. of exon:1)[A:258 T:304 G:189 C:263]
Devision HUM
Molecular type DNA
Library origin Cell type NA
Tissue type NA
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature Complete CDS
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) NA
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0026548
Genomic location  G-integra Help Chromosome 13
Location 13q32.1
Position 97639000- 97640013
Strand -
Possible duplicated location(s) NA
Gene structure 1 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene NA
KEGG GENES NA
GeneCard GeneCardOXGR1*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Predicted CDS information
HIP ID HIP000079563
Predicted CDS 1..1014;  337[aa];  Orientation:+1; 
Codon Adaptation Index (CAI). 0.762
Database links RefSeq NP_543008
UniProt Q96P68
CCDS CCDS9482

Motif information
ORF

length(337),orf(1:1014)
MNEPLDYLANASDFPDYAAAFGNCTDENIPLKMHYLPVIYGIIFLVGFPG
NAVVISTYIFKMRPWKSSTIIMLNLACTDLLYLTSLPFLIHYYASGENWI
FGDFMCKFIRFSFHFNLYSSILFLTCFSIFRYCVIIHPMSCFSIHKTRCA
VVACAVVWIISLVAVIPMTFLITSTNRTNRSACLDLTSSDELNTIKWYNL
ILTATTFCLPLVIVTLCYTTIIHTLTHGLQTDSCLKQKARRLTILLLLAF
YVCFLPFHILRVIRIESRLLSISCSIENQIHEAYIVSRPLAALNTFGNLL
LYVVVSDNFQQAVCSTVRCKVSGNLEQAKKISYSNNP*
a.a.
length
InterPro Name
length(298), motif(30:327) 298 IPR017452 GPCR, rhodopsin-like, 7TM [Domain]
length(25), motif(35:59) 25 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(253), motif(50:302) 253 IPR017452 GPCR, rhodopsin-like, 7TM [Domain]
length(245), motif(50:294) 245 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(22), motif(68:89) 22 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(23), motif(113:135) 23 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(22), motif(149:170) 22 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(24), motif(199:222) 24 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(25), motif(239:263) 25 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]
length(27), motif(284:310) 27 IPR000276 G protein-coupled receptor, rhodopsin-like [Family]

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000384038
H-Inv cluster ID Locus viewHIX0026548
Accession number AF411109.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition 2-oxoglutarate receptor 1; Alpha-ketoglutarate receptor 1; G-protein coupled receptor 80; G-protein coupled receptor 99; P2Y purinoceptor 15; P2Y15; P2Y-like GPCR; P2Y-like nucleotide receptor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96P68)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Experimental evidence Protein evidence
PubMed ID 1157415512044878120983601505782315489334ALL
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol OXGR1
HGNC aliases "G protein-coupled receptor 80"
HGNC name oxoglutarate (alpha-ketoglutarate) receptor 1
DDBJ GPR80
UniProt OXGR1
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000079563
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene NA
KEGG GENES NA
GeneCard GeneCardOXGR1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA

Gene ontology information
Molecular function G-protein coupled receptor activity (GO:0004930); 
Biological process G-protein coupled receptor protein signaling pathway (GO:0007186); 
Cellular component integral to membrane (GO:0016021); 

Subcellular localization information  Last modified:27-May-2015
WoLF PSORT plasma membrane; 
Target P Other
SOSUI membrane protein
TMHMM membrane protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
1 .. 1 A/G rs147371889 - CDS Nonsynonymous[Met1Val]
12 .. 12 A/G rs142755934 - CDS Synonymous[Pro4Pro]
37 .. 37 G/T rs140439476 - CDS Nonsynonymous[Asp13Tyr]
54 .. 54 A/G rs147138921 - CDS Synonymous[Ala18Ala]
55 .. 55 G/A rs149464525 - CDS Nonsynonymous[Ala19Thr]
133 .. 133 C/G rs181695170 - CDS Nonsynonymous[Leu45Val]
134 .. 134 T/C rs77597251 - CDS Nonsynonymous[Leu45Pro]
136 .. 136 G/A rs189018671 - CDS Nonsynonymous[Val46Met]
174 .. 174 C/T rs199833547 - CDS Synonymous[Tyr58Tyr]
187 .. 187 A/C rs9300380 - CDS Synonymous[Arg63Arg]
264 .. 264 C/T rs201944413 - CDS Synonymous[Phe88Phe]
320 .. 320 A/T rs150274872 - CDS Nonsynonymous[Lys107Met]
367 .. 367 T/G rs141931194 - CDS Nonsynonymous[Phe123Val]
391 .. 391 C/T rs138415306 - CDS Nonsynonymous[Arg131Cys]
392 .. 392 G/A rs145670146 - CDS Nonsynonymous[Arg131His]
464 .. 464 C/T rs140605584 - CDS Nonsynonymous[Ala155Val]
538 .. 538 A/G rs200424554 - CDS Nonsynonymous[Arg180Gly]
596 .. 596 A/G rs146831407 - CDS Nonsynonymous[Asn199Ser]
600 .. 600 G/A rs9284174 - CDS Synonymous[Leu200Leu]
613 .. 613 A/G rs149147994 - CDS Nonsynonymous[Thr205Ala]
669 .. 669 C/T rs145058258 - CDS Synonymous[His223His]
681 .. 681 T/C rs149963863 - CDS Synonymous[His227His]
696 .. 696 C/T rs139618344 - CDS Synonymous[Asp232Asp]
721 .. 721 A/C rs200374851 - CDS Synonymous[Arg241Arg]
722 .. 722 G/A rs147820981 - CDS Nonsynonymous[Arg241Lys]
742 ^ 743 -/C rs34496997 - CDS
754 .. 754 G/A rs144457939 - CDS Nonsynonymous[Val252Ile]
787 .. 787 A/T rs140375156 - CDS Nonsynonymous[Ile263Phe]
796 .. 796 G/A rs150544471 - CDS Nonsynonymous[Glu266Lys]
803 .. 803 G/A rs199724003 - CDS Nonsynonymous[Arg268His]
831 .. 831 G/T rs77191607 - CDS Nonsynonymous[Glu277Asp]
851 .. 851 A/G rs141610533 - CDS Nonsynonymous[Tyr284Cys]
892 .. 892 A/G rs148832052 - CDS Nonsynonymous[Asn298Asp]
893 .. 893 A/G rs185085235 - CDS Nonsynonymous[Asn298Ser]
933 .. 933 G/T rs148408262 - CDS Nonsynonymous[Gln311His]
966 .. 966 C/T rs144365402 - CDS Synonymous[Ser322Ser]
973 .. 973 C/T rs143070279 - CDS Nonsynonymous[Leu325Phe]
993 .. 993 T/C rs9584456 - CDS Synonymous[Ile331Ile]
1010 ^ 1011 -/C rs34335064 - CDS
1014 .. 1014 A/T rs145793060 - CDS STOP-AA[*338Cys]
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer